Chain A from PDB Type:PROTEIN Length:366
aligned with GLYG1_SOYBN | P04776 from UniProtKB/Swiss-Prot Length:495
Alignment length:461
38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488
GLYG1_SOYBN 29 NECQIQKLNALKPDNRIESEGGLIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQKGKHQQEEENEGGSILSGFTLEFLEHAFSVDKQIAKNLQGENEGEDKGAIVTVKGGLSVIKPPTDEQQQRPQEEEEEEEDEKPQCKGKDKHCQRPRGSQSKSRRNGIDETICTMRLRHNIGQTSSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFKTNDTPMIGTLAGANSLLNALPEEVIQHTFNLKSQQARQIKNNNPFKFLVPPQES 489
SCOP domains d1ud1a1 A:10-248 Seed storage 7S protein d1ud1a2 A:297-470 Seed storage 7S protein SCOP domains
CATH domains ------------1ud1A01 A:22-306 Jelly Rolls 1ud1A02 A:307-470 Jelly Rolls CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..............eeee...eeeee....hhhhhhhh.eeeeeee...eeeeeeee...eeeeeee..eeeeee..-----------------------....eeee...eeeee....eeeeee.....eeeeeee..............eee........hhhhhh-------------------...hhhhhhhhhhhhhhh.hhhhhhh....-----...eee..........------------------------------------------------......eee........eee...eeeeee......hhhhhh..eeeeee....eeeeeee....eeeeeee.eeeeeee.......eeeeee...eeee....eeeeee....eeeeeee......eee......hhhhhhhhhhhhhhh.hhhhhhhhhhh.....ee..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11S_SEED_STORAGE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ud1 A 10 NECQIQKLNALKPDNRIESEGGLIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYP-----------------------RHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQ-------------------GGSILSGFTLEFLEHAFSVDKQIAKNLQGE-----KGAIVTVKGGLSVIKP------------------------------------------------ICTMRLRHNIGQTSSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFKTNDTPMIGTLAGANSLLNALPEEVIQHTFNLKSQQARQIKNNNPFKFLVPPQES 470
19 29 39 49 59 69 79 | - - -| 119 129 139 149 159 169 |- - 199 209 219 | - | 239 |- - - - - 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469
86 110 178 198 227 233 248 297
Chain B from PDB Type:PROTEIN Length:366
aligned with GLYG1_SOYBN | P04776 from UniProtKB/Swiss-Prot Length:495
Alignment length:461
38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488
GLYG1_SOYBN 29 NECQIQKLNALKPDNRIESEGGLIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQKGKHQQEEENEGGSILSGFTLEFLEHAFSVDKQIAKNLQGENEGEDKGAIVTVKGGLSVIKPPTDEQQQRPQEEEEEEEDEKPQCKGKDKHCQRPRGSQSKSRRNGIDETICTMRLRHNIGQTSSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFKTNDTPMIGTLAGANSLLNALPEEVIQHTFNLKSQQARQIKNNNPFKFLVPPQES 489
SCOP domains d1ud1b1 B:10-248 Seed storage 7S protein d1ud1b2 B:297-470 Seed storage 7S protein SCOP domains
CATH domains ------------1ud1B01 B:22-306 Jelly Rolls 1ud1B02 B:307-470 Jelly Rolls CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..............eeeee..eeeee....hhhhhhhh.eeeeeee...eeeeeee....eeeeeee.eeeeeee..-----------------------....eeeee..eeeee....eeeee......eeeeeee...............ee........hhhhhh-------------------...hhhhhhhhhhhhhhh.hhhhhhhhh..-----...eee..........------------------------------------------------......eee........eee...eeeeee......hhhhhh.eeeeeee....eeeeeee....eeeeeee..eeeeee.....eeeee......eeee....eeeeee....eeeeeee......eee.....hhhhhhhhhhhhhhhh.hhhhhhhhhhh.....ee..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11S_SEED_STORAGE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ud1 B 10 NECQIQKLNALKPDNRIESEGGLIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYP-----------------------RHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQ-------------------GGSILSGFTLEFLEHAFSVDKQIAKNLQGE-----KGAIVTVKGGLSVIKP------------------------------------------------ICTMRLRHNIGQTSSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFKTNDTPMIGTLAGANSLLNALPEEVIQHTFNLKSQQARQIKNNNPFKFLVPPQES 470
19 29 39 49 59 69 79 | - - -| 119 129 139 149 159 169 |- - 199 209 219 | - | 239 |- - - - - 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469
86 110 178 198 227 233 248 297
Chain C from PDB Type:PROTEIN Length:366
aligned with GLYG1_SOYBN | P04776 from UniProtKB/Swiss-Prot Length:495
Alignment length:461
38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248 258 268 278 288 298 308 318 328 338 348 358 368 378 388 398 408 418 428 438 448 458 468 478 488
GLYG1_SOYBN 29 NECQIQKLNALKPDNRIESEGGLIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYPGCPSTFEEPQQPQQRGQSSRPQDRHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQEQGGHQSQKGKHQQEEENEGGSILSGFTLEFLEHAFSVDKQIAKNLQGENEGEDKGAIVTVKGGLSVIKPPTDEQQQRPQEEEEEEEDEKPQCKGKDKHCQRPRGSQSKSRRNGIDETICTMRLRHNIGQTSSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFKTNDTPMIGTLAGANSLLNALPEEVIQHTFNLKSQQARQIKNNNPFKFLVPPQES 489
SCOP domains d1ud1c1 C:10-248 Seed storage 7S protein d1ud1c2 C:297-470 Seed storage 7S protein SCOP domains
CATH domains ------------1ud1C01 C:22-306 Jelly Rolls 1ud1C02 C:307-470 Jelly Rolls CATH domains
Pfam domains (1) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Cupin_1-1ud1C01 C:304-453 ----------------- Pfam domains (1)
Pfam domains (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Cupin_1-1ud1C02 C:304-453 ----------------- Pfam domains (2)
Pfam domains (3) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Cupin_1-1ud1C03 C:304-453 ----------------- Pfam domains (3)
Pfam domains (4) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Cupin_1-1ud1C04 C:304-453 ----------------- Pfam domains (4)
Pfam domains (5) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Cupin_1-1ud1C05 C:304-453 ----------------- Pfam domains (5)
Pfam domains (6) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Cupin_1-1ud1C06 C:304-453 ----------------- Pfam domains (6)
Sec.struct. author ..............eeeee..eeeee....hhhhhhhh.eeeeeee...eeeeeee....eeeeeee..eeeeee..-----------------------....eeee...eeeee....eeeeee.....eeeeeee...............ee........hhhhhh-------------------........hhhhhhhhhh.hhhhhhhhh..-----...eee..........------------------------------------------------......eee........eee...eeeeee......hhhhhh.eeeeeee....eeeeeee....eeeeeee..eeeeee.....eeeeeee....eeee....eeeeee....eeeeeee......eee...........hhhhhhhhhh...hhhhhhh.......ee..... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11S_SEED_STORAGE ------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ud1 C 10 NECQIQKLNALKPDNRIESEGGLIETWNPNNKPFQCAGVALSRCTLNRNALRRPSYTNGPQEIYIQQGKGIFGMIYP-----------------------RHQKIYNFREGDLIAVPTGVAWWMYNNEDTPVVAVSIIDTNSLENQLDQMPRRFYLAGNQEQEFLKYQQ-------------------GGSILSGFTLEFLEHAFSVDKQIAKNLQGE-----KGAIVTVKGGLSVIKP------------------------------------------------ICTMRLRHNIGQTSSPDIYNPQAGSVTTATSLDFPALSWLRLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNGERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFKTNDTPMIGTLAGANSLLNALPEEVIQHTFNLKSQQARQIKNNNPFKFLVPPQES 470
19 29 39 49 59 69 79 | - - -| 119 129 139 149 159 169 |- - 199 209 219 | - | 239 |- - - - - 299 309 319 329 339 349 359 369 379 389 399 409 419 429 439 449 459 469
86 110 178 198 227 233 248 297
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |