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(-) Description

Title :  CRYSTAL STRUCTURE OF GENOMICS APC5043
 
Authors :  A. Dong, X. Xu, Y. Liu, R. Zhang, A. Savchenko, A. Edwards, Midwest Cent Structural Genomics (Mcsg)
Date :  16 Apr 04  (Deposition) - 03 Aug 04  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  A (1x),B (1x)
Keywords :  Structural Genomics, Psi, Protein Structure Initiative, Midwest Center For Structural Genomics, Mcsg, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Dong, X. Xu, Y. Liu, R. Zhang, A. Savchenko, A. Edwards
Crystal Structure Of Conserved Hypothetical Protein Pa1492 From Pseudomonas Aeruginosa
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET15B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B
Biological Unit 3 (1x): A (1x)B (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Sites  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) Sequences/Alignments

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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:119
 aligned with Q9I3M0_PSEAE | Q9I3M0 from UniProtKB/TrEMBL  Length:118

    Alignment length:119
                             1                                                                                                                     
                             |       9        19        29        39        49        59        69        79        89        99       109         
         Q9I3M0_PSEAE     - -MRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEAGGQRVSLWSEVEHEFR 118
               SCOP domains d1t1ja_ A: Hypothetical protein PA1492                                                                                  SCOP domains
               CATH domains 1t1jA00 A:0-118 Hypothetical protein PA1492                                                                             CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee......hhhhhhhhhhhhhhhhhhhhhh..eeeehhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhh..eeeehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                 1t1j A   0 HMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEAGGQRVSLWSEVEHEFR 118
                                     9        19        29        39        49        59        69        79        89        99       109         


Chain B from PDB  Type:PROTEIN  Length:125
 aligned with Q9I3M0_PSEAE | Q9I3M0 from UniProtKB/TrEMBL  Length:118

    Alignment length:125
                                   1                                                                                                                     
                                   | 3        13        23        33        43        53        63        73        83        93       103       113     
         Q9I3M0_PSEAE     - -------MRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEAGGQRVSLWSEVEHEFR 118
               SCOP domains d1t1jb_ B: Hypothetical protein PA1492                                                                                        SCOP domains
               CATH domains 1t1jB00 B:-6-118 Hypothetical protein PA1492                                                                                  CATH domains
           Pfam domains (1) --------DUF1937-1t1jB01 B:2-112                                                                                        ------ Pfam domains (1)
           Pfam domains (2) --------DUF1937-1t1jB02 B:2-112                                                                                        ------ Pfam domains (2)
         Sec.struct. author .........eeeee......hhhhhhhhhhhhhhhhhhhhhh..eeeehhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhh..eeeehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
                 1t1j B  -6 NLYFQGHMRKIFLACPYSHADAEVVEQRFRACNEVAATIVRAGHVVFSQVSMSHPINLCLAELDRAAIGRLWAPVDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEAGGQRVSLWSEVEHEFR 118
                                     3        13        23        33        43        53        63        73        83        93       103       113
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 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 2)

Asymmetric Unit
(-)
Clan: Nribosyltransf (19)

(-) Gene Ontology  (0, 0)

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