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(-) Description

Title :  STRUCTURE OF 4-HYDROXYBENZOYL-COA REDUCTASE FROM THAUERA AROMATICA
 
Authors :  M. Unciuleac, E. Warkentin, C. C. Page, M. Boll, U. Ermler
Date :  10 Feb 04  (Deposition) - 21 Dec 04  (Release) - 31 Mar 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Xanthine Oxidase Family, Dimer Of Heterotrimers, (A, B, C)2, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Unciuleac, E. Warkentin, C. C. Page, M. Boll, U. Ermler
Structure Of A Xanthine Oxidase-Related 4-Hydroxybenzoyl-Coa Reductase With An Additional [4Fe-4S] Cluster And An Inverted Electron Flow.
Structure V. 12 2249 2004
PubMed-ID: 15576037  |  Reference-DOI: 10.1016/J.STR.2004.10.008
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 4-HYDROXYBENZOYL-COA REDUCTASE ALPHA SUBUNIT
    Chains: A, D
    EC Number: 1.3.99.20
    Organism Scientific: THAUERA AROMATICA
    Organism Taxid: 59405
    Strain: STRAIN K, DSMZ 6984
 
Molecule 2 - 4-HYDROXYBENZOYL-COA REDUCTASE BETA SUBUNIT
    Chains: B, E
    EC Number: 1.3.99.20
    Organism Scientific: THAUERA AROMATICA
    Organism Taxid: 59405
    Strain: STRAIN K, DSMZ 6984
 
Molecule 3 - 4-HYDROXYBENZOYL-COA REDUCTASE GAMMA SUBUNIT
    Chains: C, F
    EC Number: 1.3.99.20
    Organism Scientific: THAUERA AROMATICA
    Organism Taxid: 59405
    Strain: STRAIN K, DSMZ 6984

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 13)

Asymmetric/Biological Unit (6, 13)
No.NameCountTypeFull Name
1EPE1Ligand/Ion4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
2FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
3FES4Ligand/IonFE2/S2 (INORGANIC) CLUSTER
4PCD2Ligand/Ion(MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V)
5SF42Ligand/IonIRON/SULFUR CLUSTER
6SO42Ligand/IonSULFATE ION

(-) Sites  (13, 13)

Asymmetric Unit (13, 13)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREILE D:705 , GLU D:706 , VAL D:707 , HOH D:2172BINDING SITE FOR RESIDUE SO4 D 1112
02AC2SOFTWAREALA E:26 , LEU E:28 , GLY E:45 , HIS E:46 , TYR E:141BINDING SITE FOR RESIDUE SO4 E 1113
03AC3SOFTWAREGLN A:214 , GLY A:243 , GLY A:244 , PHE A:245 , GLY A:246 , THR A:249 , MET A:357 , ARG A:358 , ILE A:481 , GLY A:482 , GLN A:483 , GLY A:484 , SER A:485 , SER A:520 , TYR A:521 , SER A:522 , SER A:523 , ARG A:524 , VAL A:525 , THR A:526 , VAL A:650 , LYS A:652 , LEU A:654 , ASN A:655 , ALA A:658 , VAL A:659 , GLN A:662 , ALA A:721 , LYS A:722 , GLU A:723 , ALA A:724 , SER A:725 , GLU A:726 , HOH A:1923 , HOH A:1965 , HOH A:2011 , HOH A:2049 , HOH A:2071 , GLN C:99 , CYS C:137BINDING SITE FOR RESIDUE PCD A 1920
04AC4SOFTWAREPRO B:29 , GLY B:31 , ALA B:32 , GLY B:33 , THR B:34 , ASP B:35 , LEU B:36 , LEU B:53 , LEU B:78 , VAL B:101 , ALA B:102 , ALA B:110 , THR B:111 , GLY B:114 , ASN B:115 , CYS B:117 , GLN B:118 , GLY B:161 , ASP B:162 , LEU B:201 , LEU B:207 , LYS B:224 , VAL B:231 , ASP B:232 , PHE B:233 , HOH B:1932 , HOH B:1942 , HOH B:1959 , HOH B:1969 , GLY C:44BINDING SITE FOR RESIDUE FAD B 1900
05AC5SOFTWARECYS B:122 , CYS B:138 , LYS B:140 , CYS B:146 , HIS B:147 , CYS B:155 , TYR B:156 , ALA B:157BINDING SITE FOR RESIDUE SF4 B 1910
06AC6SOFTWAREMET A:191 , GLN C:99 , CYS C:100 , GLY C:101 , CYS C:103 , CYS C:135 , ARG C:136 , CYS C:137BINDING SITE FOR RESIDUE FES C 1907
07AC7SOFTWAREGLY C:40 , CYS C:41 , GLY C:44 , GLU C:45 , CYS C:46 , GLY C:47 , CYS C:49 , CYS C:61BINDING SITE FOR RESIDUE FES C 1908
08AC8SOFTWAREGLN D:214 , GLY D:243 , GLY D:244 , PHE D:245 , GLY D:246 , THR D:249 , MET D:357 , ARG D:358 , ILE D:481 , GLY D:482 , GLN D:483 , GLY D:484 , SER D:485 , SER D:520 , TYR D:521 , SER D:522 , SER D:523 , ARG D:524 , VAL D:525 , THR D:526 , VAL D:650 , LYS D:652 , LEU D:654 , ASN D:655 , ALA D:658 , VAL D:659 , GLN D:662 , ALA D:721 , LYS D:722 , GLU D:723 , ALA D:724 , SER D:725 , GLU D:726 , HOH D:1937 , HOH D:1962 , HOH D:2014 , HOH D:2045 , GLN F:99 , CYS F:137BINDING SITE FOR RESIDUE PCD D 1921
09AC9SOFTWAREPRO E:29 , GLY E:31 , ALA E:32 , GLY E:33 , THR E:34 , ASP E:35 , LEU E:36 , LEU E:53 , LEU E:78 , VAL E:101 , ALA E:102 , THR E:111 , GLY E:114 , ASN E:115 , CYS E:117 , GLN E:118 , GLY E:161 , ASP E:162 , LEU E:201 , LEU E:206 , LEU E:207 , LYS E:224 , VAL E:231 , ASP E:232 , PHE E:233 , HOH E:1918 , HOH E:1928 , HOH E:1965 , HOH E:2007 , GLY F:44BINDING SITE FOR RESIDUE FAD E 1901
10BC1SOFTWARECYS E:122 , PHE E:124 , CYS E:138 , LYS E:140 , CYS E:146 , HIS E:147 , CYS E:155 , TYR E:156 , ALA E:157BINDING SITE FOR RESIDUE SF4 E 1911
11BC2SOFTWAREMET D:191 , GLN F:99 , CYS F:100 , GLY F:101 , CYS F:103 , CYS F:135 , ARG F:136 , CYS F:137BINDING SITE FOR RESIDUE FES F 1917
12BC3SOFTWAREGLN F:39 , GLY F:40 , CYS F:41 , GLY F:44 , GLU F:45 , CYS F:46 , GLY F:47 , CYS F:49 , CYS F:61BINDING SITE FOR RESIDUE FES F 1918
13BC4SOFTWAREHIS A:453 , TRP A:454 , THR A:455 , GLY A:456 , HIS A:459 , GLN A:605BINDING SITE FOR RESIDUE EPE A 1111

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1SB3)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Ile A:396 -Pro A:397
2Phe A:751 -Pro A:752
3Ile D:396 -Pro D:397
4Phe D:751 -Pro D:752

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1SB3)

(-) PROSITE Motifs  (3, 6)

Asymmetric/Biological Unit (3, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FAD_PCMHPS51387 PCMH-type FAD-binding domain profile.HCRB_THAAR2-217
 		  2B:2-217
E:2-217
22FE2S_FER_2PS51085 2Fe-2S ferredoxin-type iron-sulfur binding domain profile.HCRC_THAAR3-79
 		  2C:3-79
F:3-79
32FE2S_FER_1PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature.HCRC_THAAR41-49
 		  2C:41-49
F:41-49

(-) Exons   (0, 0)

(no "Exon" information available for 1SB3)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:761
 aligned with HCRA_THAAR | O33819 from UniProtKB/Swiss-Prot  Length:769

    Alignment length:761
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758       768 
           HCRA_THAAR     9 GTVGVRTPLVDGVEKVTGKAKYTADIAAPDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETPVPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDYEVLPAYMTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFAEADLIREKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGARTEGLHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEKVKAASGWEERKGKLPKGRGLGIALSHFVSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDNGRMVHGNILDYRVPTIVESPDIEVIIVESMDPNGPFGAKEASEGMLAGFLPAIHEAVYEAVGVRATDFPLSPDRITELLDAKEAAA 769
               SCOP domains d1sb3a1 A:9-133 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, N-terminal domain                                         d1sb3a2 A:134-769 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains --------1sb3A01                1sb3A02 A:40-131  [code=3.90.1170.50, no name defined]                                      1sb3A03 A:132-187,A:284-359                             1sb3A01 A:17-39,A:188-283 Aldehyde Oxidoreductase; domain 4                                     1sb3A03 A:132-187,A:284-359 Aldehyde Oxidoreductase; domain 4               1sb3A04 A:360-446,A:620-769 Aldehyde Oxidoreductase; domain 4                          1sb3A05 A:447-619 Aldehyde Oxidoreductase; domain 4                                                                                                                          1sb3A04 A:360-446,A:620-769 Aldehyde Oxidoreductase; domain 4                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhh....hhhhh.....eeeeeee.....eeeeeeehhhhhhh..eeeeee.hhh...................ee.....eeeeeee.hhhhhhhhhhh.eeeeee.....hhhhhhh.............eeeeeeeee.hhhhhhhh..eeeeeeeee...........eeeeeee....eeeeee...hhhhhhhhhhhhhh.hhh.eeee..............hhhhhhhhhhhhhhh.eeeee.hhhhhhhhh....eeeeeeeeee.....eeeeeeeeeee......hhhhhhhhhhhh.........eeeeeeee..............hhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.....ee.....ee...hhhhhhhhhhhhhhhhhhh......eeeeeeeeeee..............eeeeeee.....eeeee.......hhhhhhhhhhhhhhh.hhh.eeeee...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeee..eeee.......eehhhhhhhhhh....eeeeeee..hhhhh...............eeeeeeeeeeee......eeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhh....ee..ee.................eeeeeee......hhhhh.........hhhhhhhhhhhhhhh....ee..hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1sb3 A   9 GTVGVRTPLVDGVEKVTGKAKYTADIAAPDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETPVPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDYEVLPAYMTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFAEADLIREKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGARTEALHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEKVKAASGWEERKGKLPKGRGLGIALSHFVSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDNGRMVHGNILDYRVPTIVESPDIEVIIVESMDPNGPFGAKEASEGMLAGFLPAIHEAVYEAVGVRATDFPLSPDRITELLDAKEAAA 769
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758       768 


Chain B from PDB  Type:PROTEIN  Length:323
 aligned with HCRB_THAAR | O33820 from UniProtKB/Swiss-Prot  Length:324

    Alignment length:323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320   
           HCRB_THAAR     1 MNILTDFRTHRPATLADAVNALAAEATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDVAPALMVLDARAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPTGAWSAAYSKVRIRDAVDFPLAGVAAALQRDGDRIAGLRVAITGSNSAPLMVPVDALLGGNWDDAAAETLAQLVRKTSNVLRTTITGVKYRRRVLLAISRKVVDQLWEA 323
               SCOP domains d1sb3b2 B:1-216 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain                                                                                                                                     d1sb3b1 B:217-323 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, C-terminal domain                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1sb3B02 B:217-323  [code=3.30.390.50, no name defined]                                                      CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eee...hhhhhhhhh....eeee....hhhhhhhh......eeee.........eee.....eeee...hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhh..hhhhhhh..........hhhhhhhh..........................hhhhhhhhh..eeeeee..eeeeee.hhhh..............eeeeeee......eeeeeee..........eeeeeeeeee..eeeeeeeeee......ee..hhhhh....hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -FAD_PCMH  PDB: B:2-217 UniProt: 2-217                                                                                                                                                                                   ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1sb3 B   1 MNILTDFRTHRPATLADAVNALAAEATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDVAPALMVLDARAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPTGAWSAAYSKVRIRDAVDFPLAGVAAALQRDGDRIAGLRVAITGSNSAPLMVPVDALLGGNWDDAAAETLAQLVRKTSNVLRTTITGVKYRRRVLLAISRKVVDQLWEA 323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320   


Chain C from PDB  Type:PROTEIN  Length:161
 aligned with HCRC_THAAR | O33818 from UniProtKB/Swiss-Prot  Length:161

    Alignment length:161
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160 
           HCRC_THAAR     1 MKNILRLTLNGRAREDLVPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLVDDRPRLACSTLAHQVAGKKVETVESLATQGTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRKNPSPSRDEIKAALAGNLCRCTGYVRSSKSVETAAAARLCEEGAR 161
               SCOP domains d1sb3c2 C:1-81                                                                   d1sb3c1 C:82-157                                                            ---- SCOP domains
               CATH domains 1sb3C01 C:1-78  [code=3.10.20.30, no name defined]                            1sb3C02 C:79-161  [code=1.10.150.120, no name defined]                              CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..eeeeeeee...hhhhhhhhh..................eeee..eeee.hhhhhhhhh..eeehhhhh......hhhhhhhhhh.......hhhhhhhhhhhhhhhh...hhhhhhhhh.........hhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --2FE2S_FER_2  PDB: C:3-79 UniProt: 3-79                                       ---------------------------------------------------------------------------------- PROSITE (2)
                PROSITE (3) ----------------------------------------2FE2S_FER---------------------------------------------------------------------------------------------------------------- PROSITE (3)
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1sb3 C   1 MKNILRLTLNGRAREDLVPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLVDDRPRLACSTLAHQVAGKKVETVESLATQGTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRKNPSPSRDEIKAALAGNLCRCTGYVKIIKSVETAAAARLCEEGAR 161
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160 


Chain D from PDB  Type:PROTEIN  Length:760
 aligned with HCRA_THAAR | O33819 from UniProtKB/Swiss-Prot  Length:769

    Alignment length:760
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758       768
           HCRA_THAAR     9 GTVGVRTPLVDGVEKVTGKAKYTADIAAPDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETPVPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDYEVLPAYMTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFAEADLIREKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGARTEGLHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEKVKAASGWEERKGKLPKGRGLGIALSHFVSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDNGRMVHGNILDYRVPTIVESPDIEVIIVESMDPNGPFGAKEASEGMLAGFLPAIHEAVYEAVGVRATDFPLSPDRITELLDAKEAA 768
               SCOP domains d1sb3d1 D:9-133 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, N-terminal domain                                         d1sb3d2 D:134-768 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains --------1sb3D01                1sb3D02 D:40-131  [code=3.90.1170.50, no name defined]                                      1sb3D03 D:132-187,D:284-359                             1sb3D01 D:17-39,D:188-283 Aldehyde Oxidoreductase; domain 4                                     1sb3D03 D:132-187,D:284-359 Aldehyde Oxidoreductase; domain 4               1sb3D04 D:360-446,D:620-768 Aldehyde Oxidoreductase; domain 4                          1sb3D05 D:447-619 Aldehyde Oxidoreductase; domain 4                                                                                                                          1sb3D04 D:360-446,D:620-768 Aldehyde Oxidoreductase; domain 4                                                                                         CATH domains
           Pfam domains (1) ----------------Ald_Xan_dh_C-1sb3D03 D:25-131                                                                              -------Ald_Xan_dh_C2-1sb3D01 D:139-703                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ----------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ----------------Ald_Xan_dh_C-1sb3D04 D:25-131                                                                              -------Ald_Xan_dh_C2-1sb3D02 D:139-703                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ----------------------------------------------------------------- Pfam domains (2)
         Sec.struct. author ..........hhhhhhh....hhhhh.....eeeeeee.....eeeeeeehhhhhhh..eeeeee.hhh...................ee.....eeeeeee.hhhhhhhhhhh.eeeeee.....hhhhhhh.............eeeeeeeee.hhhhhhhh..eeeeeeeee...........eeeeeee....eeeeee...hhhhhhhhhhhhhh.hhh.eeee..............hhhhhhhhhhhhhhh.eeeee.hhhhhhhhh....eeeeeeeeee.....eeeeeeeeeee......hhhhhhhhhhhh.........eeeeeeee..............hhhhhhhhhhhhhhhhhhh..hhhhhhhhhh.....ee.....ee...hhhhhhhhhhhhhhhhhhh......eeeeeeeeeee..............eeeeeee.....eeeee.......hhhhhhhhhhhhhhh.hhh.eeeee...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eeee..eeee.......eehhhhhhhhhh....eeeeeee..hhhhh...............eeeeeeeeeeee......eeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhh....ee..ee.................eeeeeee......hhhhh.........hhhhhhhhhhhhhhh....ee..hhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1sb3 D   9 GTVGVRTPLVDGVEKVTGKAKYTADIAAPDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETPVPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDYEVLPAYMTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFAEADLIREKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGARTEALHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEKVKAASGWEERKGKLPKGRGLGIALSHFVSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDNGRMVHGNILDYRVPTIVESPDIEVIIVESMDPNGPFGAKEASEGMLAGFLPAIHEAVYEAVGVRATDFPLSPDRITELLDAKEAA 768
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758       768


Chain E from PDB  Type:PROTEIN  Length:323
 aligned with HCRB_THAAR | O33820 from UniProtKB/Swiss-Prot  Length:324

    Alignment length:323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320   
           HCRB_THAAR     1 MNILTDFRTHRPATLADAVNALAAEATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDVAPALMVLDARAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPTGAWSAAYSKVRIRDAVDFPLAGVAAALQRDGDRIAGLRVAITGSNSAPLMVPVDALLGGNWDDAAAETLAQLVRKTSNVLRTTITGVKYRRRVLLAISRKVVDQLWEA 323
               SCOP domains d1sb3e2 E:1-216 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain                                                                                                                                     d1sb3e1 E:217-323 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, C-terminal domain                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1sb3E02 E:217-323  [code=3.30.390.50, no name defined]                                                      CATH domains
           Pfam domains (1) ----FAD_binding_5-1sb3E01 E:5-215                                                                                                                                                                                      ----CO_deh_flav_C-1sb3E03 E:220-320                                                                      --- Pfam domains (1)
           Pfam domains (2) ----FAD_binding_5-1sb3E02 E:5-215                                                                                                                                                                                      ----CO_deh_flav_C-1sb3E04 E:220-320                                                                      --- Pfam domains (2)
         Sec.struct. author .......eee...hhhhhhhhh....eeee....hhhhhhhh......eeee.........eee.....eeee...hhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh..........hhhhhhhh..........................hhhhhhhhh..eeeeee..eeeeee.hhhh..............eeeeeee......eeeeeee..........eeeeeeeeee..eeeeeeeeee......ee..hhhhh....hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -FAD_PCMH  PDB: E:2-217 UniProt: 2-217                                                                                                                                                                                   ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1sb3 E   1 MNILTDFRTHRPATLADAVNALAAEATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDVAPALMVLDARAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPTGAWSAAYSKVRIRDAVDFPLAGVAAALQRDGDRIAGLRVAITGSNSAPLMVPVDALLGGNWDDAAAETLAQLVRKTSNVLRTTITGVKYRRRVLLAISRKVVDQLWEA 323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320   


Chain F from PDB  Type:PROTEIN  Length:157
 aligned with HCRC_THAAR | O33818 from UniProtKB/Swiss-Prot  Length:161

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           HCRC_THAAR     1 MKNILRLTLNGRAREDLVPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLVDDRPRLACSTLAHQVAGKKVETVESLATQGTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRKNPSPSRDEIKAALAGNLCRCTGYVRSSKSVETAAAARLCE 157
               SCOP domains d1sb3f2 F:1-81                                                                   d1sb3f1 F:82-157                                                             SCOP domains
               CATH domains 1sb3F01 F:1-78  [code=3.10.20.30, no name defined]                            1sb3F02 F:79-157  [code=1.10.150.120, no name defined]                          CATH domains
           Pfam domains (1) ------Fer2-1sb3F01 F:7-66                                         --------Fer2_2-1sb3F03 F:75-149                                                    -------- Pfam domains (1)
           Pfam domains (2) ------Fer2-1sb3F02 F:7-66                                         --------Fer2_2-1sb3F04 F:75-149                                                    -------- Pfam domains (2)
         Sec.struct. author .eeeeeeee..eeeeeeee...hhhhhhhhh..................eeee..eeee.hhhhhhhhh..eeehhhhh......hhhhhhhhhhh......hhhhhhhhhhhhhhhh...hhhhhhhhh.........hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --2FE2S_FER_2  PDB: F:3-79 UniProt: 3-79                                       ------------------------------------------------------------------------------ PROSITE (2)
                PROSITE (3) ----------------------------------------2FE2S_FER------------------------------------------------------------------------------------------------------------ PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1sb3 F   1 MKNILRLTLNGRAREDLVPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLVDDRPRLACSTLAHQVAGKKVETVESLATQGTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRKNPSPSRDEIKAALAGNLCRCTGYVKIIKSVETAAAARLCE 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (6, 12)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Alpha and beta proteins (a+b) (23004)
(-)
Fold: alpha/beta-Hammerhead (191)
(-)
Fold: beta-Grasp (ubiquitin-like) (1032)
(-)
Fold: CO dehydrogenase flavoprotein C-domain-like (111)
(-)
Fold: FAD-binding/transporter-associated domain-like (99)
(-)
Fold: Molybdenum cofactor-binding domain (44)

(-) CATH Domains  (5, 16)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (6, 12)

Asymmetric/Biological Unit
(-)
Clan: FAD_PCMH (53)
(-)
Clan: Fer2 (69)
(-)
Clan: no clan defined [family: Ald_Xan_dh_C2] (24)
(-)
Clan: no clan defined [family: Ald_Xan_dh_C] (24)
(-)
Clan: no clan defined [family: CO_deh_flav_C] (22)

(-) Gene Ontology  (11, 19)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,D   (HCRA_THAAR | O33819)
molecular function
    GO:0018525    4-hydroxybenzoyl-CoA reductase activity    Catalysis of the reaction: benzoyl-CoA + oxidized ferredoxin + H2O = 4-hydroxybenzoyl-CoA + reduced ferredoxin.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Chain B,E   (HCRB_THAAR | O33820)
molecular function
    GO:0051539    4 iron, 4 sulfur cluster binding    Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
    GO:0018525    4-hydroxybenzoyl-CoA reductase activity    Catalysis of the reaction: benzoyl-CoA + oxidized ferredoxin + H2O = 4-hydroxybenzoyl-CoA + reduced ferredoxin.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0050660    flavin adenine dinucleotide binding    Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016614    oxidoreductase activity, acting on CH-OH group of donors    Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Chain C,F   (HCRC_THAAR | O33818)
molecular function
    GO:0051537    2 iron, 2 sulfur cluster binding    Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
    GO:0018525    4-hydroxybenzoyl-CoA reductase activity    Catalysis of the reaction: benzoyl-CoA + oxidized ferredoxin + H2O = 4-hydroxybenzoyl-CoA + reduced ferredoxin.
    GO:0009055    electron carrier activity    Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HCRA_THAAR | O33819: 1rm6
        HCRB_THAAR | O33820: 1rm6
        HCRC_THAAR | O33818: 1rm6

(-) Related Entries Specified in the PDB File

1rm6 STRUCTURE OF 4-HYDROXYBENZOYL-COA REDUCTASE FROM THAUERA AROMATICA