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(-) Description

Title :  STRUCTURE OF 4-HYDROXYBENZOYL-COA REDUCTASE FROM THAUERA AROMATICA
 
Authors :  M. Unciuleac, E. Warkentin, C. C. Page, P. L. Dutton, M. Boll, U. Ermler
Date :  27 Nov 03  (Deposition) - 21 Dec 04  (Release) - 31 Mar 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Xanthine Oxidase Family, Dimer Heterotrimers, (A, B, C)2, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. Unciuleac, E. Warkentin, C. C. Page, M. Boll, U. Ermler
Structure Of A Xanthine Oxidase-Related 4-Hydroxybenzoyl-Coa Reductase With An Additional [4Fe-4S] Cluster And An Inverted Electron Flow
Structure V. 12 2249 2004
PubMed-ID: 15576037  |  Reference-DOI: 10.1016/J.STR.2004.10.008
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 4-HYDROXYBENZOYL-COA REDUCTASE ALPHA SUBUNIT
    ChainsA, D
    EC Number1.3.99.20
    Organism ScientificTHAUERA AROMATICA
    Organism Taxid59405
    StrainSTRAIN K, DSMZ 6984
 
Molecule 2 - 4-HYDROXYBENZOYL-COA REDUCTASE BETA SUBUNIT
    ChainsB, E
    EC Number1.3.99.20
    Organism ScientificTHAUERA AROMATICA
    Organism Taxid59405
    StrainSTRAIN K, DSMZ 6984
 
Molecule 3 - 4-HYDROXYBENZOYL-COA REDUCTASE GAMMA SUBUNIT
    ChainsC, F
    EC Number1.3.99.20
    Organism ScientificTHAUERA AROMATICA
    Organism Taxid59405
    StrainSTRAIN K, DSMZ 6984

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (9, 20)

Asymmetric/Biological Unit (9, 20)
No.NameCountTypeFull Name
1CL2Ligand/IonCHLORIDE ION
2EPE4Ligand/Ion4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
3FAD2Ligand/IonFLAVIN-ADENINE DINUCLEOTIDE
4FES4Ligand/IonFE2/S2 (INORGANIC) CLUSTER
5K1Ligand/IonPOTASSIUM ION
6NA2Ligand/IonSODIUM ION
7PCD2Ligand/Ion(MOLYBDOPTERIN-CYTOSINE DINUCLEOTIDE-S,S)-DIOXO-AQUA-MOLYBDENUM(V)
8SF42Ligand/IonIRON/SULFUR CLUSTER
9SO41Ligand/IonSULFATE ION

(-) Sites  (20, 20)

Asymmetric Unit (20, 20)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG D:285 , GLY D:361 , THR D:362 , VAL D:363 , ASP D:364BINDING SITE FOR RESIDUE CL D 770
02AC2SOFTWAREARG A:285 , GLY A:361 , THR A:362 , VAL A:363 , ASP A:364BINDING SITE FOR RESIDUE CL A 770
03AC3SOFTWAREALA D:142 , ALA D:144 , PRO D:152 , HOH D:6490 , HOH D:7201 , HOH D:9047BINDING SITE FOR RESIDUE K D 771
04AC4SOFTWAREGLU D:63 , LEU D:65 , VAL D:68 , HOH D:9384BINDING SITE FOR RESIDUE NA D 772
05AC5SOFTWAREGLU A:63 , LEU A:65 , VAL A:68 , HOH A:9204BINDING SITE FOR RESIDUE NA A 771
06AC6SOFTWAREILE D:34 , HOH D:7197 , HOH D:9453 , ARG F:29BINDING SITE FOR RESIDUE SO4 D 773
07AC7SOFTWAREGLN A:214 , GLY A:243 , GLY A:244 , PHE A:245 , GLY A:246 , THR A:249 , MET A:357 , ARG A:358 , ILE A:481 , GLY A:482 , GLN A:483 , GLY A:484 , SER A:485 , SER A:520 , TYR A:521 , SER A:522 , SER A:523 , ARG A:524 , VAL A:525 , THR A:526 , VAL A:650 , LYS A:652 , LEU A:654 , ASN A:655 , ALA A:658 , VAL A:659 , GLN A:662 , ALA A:721 , LYS A:722 , GLU A:723 , ALA A:724 , SER A:725 , GLU A:726 , HOH A:6027 , HOH A:6036 , HOH A:6092 , HOH A:6115 , HOH A:9066 , GLN C:99 , CYS C:137BINDING SITE FOR RESIDUE PCD A 920
08AC8SOFTWAREPRO B:29 , GLY B:31 , ALA B:32 , GLY B:33 , THR B:34 , ASP B:35 , LEU B:36 , LEU B:53 , LEU B:78 , VAL B:101 , ALA B:102 , ALA B:110 , THR B:111 , GLY B:114 , ASN B:115 , CYS B:117 , GLN B:118 , GLY B:161 , ASP B:162 , LEU B:201 , LEU B:207 , LYS B:224 , VAL B:231 , ASP B:232 , PHE B:233 , HOH B:6267 , HOH B:6289 , HOH B:6365 , HOH B:6495 , HOH B:7088 , GLY C:44BINDING SITE FOR RESIDUE FAD B 900
09AC9SOFTWARECYS B:122 , PHE B:124 , TYR B:125 , CYS B:138 , LEU B:139 , LYS B:140 , CYS B:146 , HIS B:147 , VAL B:148 , CYS B:155 , TYR B:156 , ALA B:157BINDING SITE FOR RESIDUE SF4 B 910
10BC1SOFTWAREMET A:191 , GLN C:99 , CYS C:100 , GLY C:101 , CYS C:103 , CYS C:135 , ARG C:136 , CYS C:137BINDING SITE FOR RESIDUE FES C 907
11BC2SOFTWAREGLY C:40 , CYS C:41 , GLY C:44 , GLU C:45 , CYS C:46 , GLY C:47 , CYS C:49 , CYS C:61BINDING SITE FOR RESIDUE FES C 908
12BC3SOFTWAREGLN D:214 , GLY D:243 , GLY D:244 , PHE D:245 , GLY D:246 , THR D:249 , MET D:357 , ARG D:358 , ILE D:481 , GLY D:482 , GLN D:483 , GLY D:484 , SER D:485 , SER D:520 , TYR D:521 , SER D:522 , SER D:523 , ARG D:524 , VAL D:525 , THR D:526 , VAL D:650 , LYS D:652 , LEU D:654 , ASN D:655 , ALA D:658 , VAL D:659 , GLN D:662 , ALA D:721 , LYS D:722 , GLU D:723 , ALA D:724 , SER D:725 , GLU D:726 , HOH D:6003 , HOH D:6045 , HOH D:6063 , HOH D:6079 , HOH D:6522 , GLN F:99 , CYS F:137BINDING SITE FOR RESIDUE PCD D 920
13BC4SOFTWAREPRO E:29 , GLY E:31 , ALA E:32 , GLY E:33 , THR E:34 , ASP E:35 , LEU E:36 , LEU E:53 , LEU E:78 , VAL E:101 , ALA E:102 , ALA E:110 , THR E:111 , GLY E:114 , ASN E:115 , CYS E:117 , GLN E:118 , GLY E:161 , ASP E:162 , LEU E:207 , LYS E:224 , VAL E:231 , ASP E:232 , PHE E:233 , HOH E:6542 , HOH E:6595 , HOH E:6704 , HOH E:6865 , HOH E:9160 , GLY F:44BINDING SITE FOR RESIDUE FAD E 900
14BC5SOFTWARECYS E:122 , PHE E:124 , TYR E:125 , CYS E:138 , LEU E:139 , LYS E:140 , CYS E:146 , HIS E:147 , VAL E:148 , CYS E:155 , TYR E:156 , ALA E:157BINDING SITE FOR RESIDUE SF4 E 910
15BC6SOFTWAREMET D:191 , GLN F:99 , CYS F:100 , GLY F:101 , CYS F:103 , CYS F:135 , ARG F:136 , CYS F:137BINDING SITE FOR RESIDUE FES F 907
16BC7SOFTWAREGLY F:40 , CYS F:41 , GLY F:44 , GLU F:45 , CYS F:46 , GLY F:47 , CYS F:49 , CYS F:61BINDING SITE FOR RESIDUE FES F 908
17BC8SOFTWAREPRO A:451 , TRP A:454 , THR A:455 , GLY A:456 , HIS A:459 , LYS A:608 , HOH A:7168 , HOH A:7198 , HOH A:7329 , HOH A:9088 , HOH A:9103 , HOH A:9366BINDING SITE FOR RESIDUE EPE A 930
18BC9SOFTWAREALA B:66 , GLY B:68 , ARG D:53 , LYS D:97 , ILE D:145 , HOH D:7345 , HOH D:7512 , HOH D:9007BINDING SITE FOR RESIDUE EPE D 931
19CC1SOFTWAREALA A:171 , ASP A:174 , ILE A:176 , HOH A:6291 , HOH A:6551 , LYS D:609BINDING SITE FOR RESIDUE EPE A 932
20CC2SOFTWAREGLU A:660 , GLN A:664 , ILE A:705 , GLU A:706 , VAL A:707 , HOH A:6811 , LYS C:145 , HOH C:6102 , HOH C:6769BINDING SITE FOR RESIDUE EPE A 933

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1RM6)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Ile A:396 -Pro A:397
2Phe A:751 -Pro A:752
3Ile D:396 -Pro D:397
4Phe D:751 -Pro D:752

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1RM6)

(-) PROSITE Motifs  (3, 6)

Asymmetric/Biological Unit (3, 6)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FAD_PCMHPS51387 PCMH-type FAD-binding domain profile.HCRB_THAAR2-217
 
  2B:2-217
E:2-217
22FE2S_FER_2PS51085 2Fe-2S ferredoxin-type iron-sulfur binding domain profile.HCRC_THAAR3-79
 
  2C:3-79
F:3-79
32FE2S_FER_1PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature.HCRC_THAAR41-49
 
  2C:41-49
F:41-49

(-) Exons   (0, 0)

(no "Exon" information available for 1RM6)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:761
 aligned with HCRA_THAAR | O33819 from UniProtKB/Swiss-Prot  Length:769

    Alignment length:761
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758       768 
           HCRA_THAAR     9 GTVGVRTPLVDGVEKVTGKAKYTADIAAPDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETPVPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDYEVLPAYMTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFAEADLIREKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGARTEGLHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEKVKAASGWEERKGKLPKGRGLGIALSHFVSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDNGRMVHGNILDYRVPTIVESPDIEVIIVESMDPNGPFGAKEASEGMLAGFLPAIHEAVYEAVGVRATDFPLSPDRITELLDAKEAAA 769
               SCOP domains d1rm6a1 A:9-133 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, N-terminal domain                                         d1rm6a2 A:134-769 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains --------1rm6A01                1rm6A02 A:40-131  [code=3.90.1170.50, no name defined]                                      1rm6A03 A:132-187,A:284-359                             1rm6A01 A:17-39,A:188-283 Aldehyde Oxidoreductase; domain 4                                     1rm6A03 A:132-187,A:284-359 Aldehyde Oxidoreductase; domain 4               1rm6A04 A:360-446,A:620-769 Aldehyde Oxidoreductase; domain 4                          1rm6A05 A:447-619 Aldehyde Oxidoreductase; domain 4                                                                                                                          1rm6A04 A:360-446,A:620-769 Aldehyde Oxidoreductase; domain 4                                                                                          CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhhhhh....hhhhh.....eeeeeee.....eeeeeeehhhhhhh..eeeeee.hhh...................ee.....eeeeeee.hhhhhhhhhhhheeeeee.....hhhhhhh.............eeeeeeeee.hhhhhhhh..eeeeeeeee...........eeeeeee....eeeeee...hhhhhhhhhhhhhh.hhh.eeee..............hhhhhhhhhhhhhhh.eeeee.hhhhhhhhh....eeeeeeeeee.....eeeeeeeeeee......hhhhhhhhhhhh.........eeeeeeee..............hhhhhhhhhhhhhhhhhhhh.hhhhhhhhh......ee.....ee...hhhhhhhhhhhhhhhhhhh......eeeeeeeeeee..............eeeeeee.....eeeee.......hhhhhhhhhhhhhhh.hhh.eeeee...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhh.eeee..eeee.......eehhhhhhhhhh....eeeeeee..hhhhh....hhhhhh.....eeeeeeeeeeee......eeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhh....ee..ee.................eeeeeee......hhhhh.........hhhhhhhhhhhhhhh....ee..hhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rm6 A   9 GTVGVRTPLVDGVEKVTGKAKYTADIAAPDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETPVPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDYEVLPAYMTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFAEADLIREKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGARTEALHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEKVKAASGWEERKGKLPKGRGLGIALSHFVSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDNGRMVHGNILDYRVPTIVESPDIEVIIVESMDPNGPFGAKEASEGMLAGFLPAIHEAVYEAVGVRATDFPLSPDRITELLDAKEAAA 769
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758       768 

Chain B from PDB  Type:PROTEIN  Length:323
 aligned with HCRB_THAAR | O33820 from UniProtKB/Swiss-Prot  Length:324

    Alignment length:323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320   
           HCRB_THAAR     1 MNILTDFRTHRPATLADAVNALAAEATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDVAPALMVLDARAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPTGAWSAAYSKVRIRDAVDFPLAGVAAALQRDGDRIAGLRVAITGSNSAPLMVPVDALLGGNWDDAAAETLAQLVRKTSNVLRTTITGVKYRRRVLLAISRKVVDQLWEA 323
               SCOP domains d1rm6b2 B:1-216 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain                                                                                                                                     d1rm6b1 B:217-323 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, C-terminal domain                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1rm6B02 B:217-323  [code=3.30.390.50, no name defined]                                                      CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eee...hhhhhhhhh....eeee....hhhhhhhh......eeee.........eee.....eeee...hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh..........hhhhhhhh..........................hhhhhhhhh..eeeeee..eeeeee.hhhh..............eeeeeee......eeeeeee..........eeeeeeeeee..eeeeeeeeee......ee..hhhhh....hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -FAD_PCMH  PDB: B:2-217 UniProt: 2-217                                                                                                                                                                                   ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rm6 B   1 MNILTDFRTHRPATLADAVNALAAEATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDVAPALMVLDARAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPTGAWSAAYSKVRIRDAVDFPLAGVAAALQRDGDRIAGLRVAITGSNSAPLMVPVDALLGGNWDDAAAETLAQLVRKTSNVLRTTITGVKYRRRVLLAISRKVVDQLWEA 323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320   

Chain C from PDB  Type:PROTEIN  Length:157
 aligned with HCRC_THAAR | O33818 from UniProtKB/Swiss-Prot  Length:161

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           HCRC_THAAR     1 MKNILRLTLNGRAREDLVPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLVDDRPRLACSTLAHQVAGKKVETVESLATQGTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRKNPSPSRDEIKAALAGNLCRCTGYVRSSKSVETAAAARLCE 157
               SCOP domains d1rm6c2 C:1-81                                                                   d1rm6c1 C:82-157                                                             SCOP domains
               CATH domains 1rm6C01 C:1-78  [code=3.10.20.30, no name defined]                            1rm6C02 C:79-157  [code=1.10.150.120, no name defined]                          CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..eeeeeeee...hhhhhhhhh..................eeee..eeee.hhhhhhhhh..eeehhhhh......hhhhhhhhhh.......hhhhhhhhhhhhhhhh...hhhhhhhhh.........hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --2FE2S_FER_2  PDB: C:3-79 UniProt: 3-79                                       ------------------------------------------------------------------------------ PROSITE (2)
                PROSITE (3) ----------------------------------------2FE2S_FER------------------------------------------------------------------------------------------------------------ PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rm6 C   1 MKNILRLTLNGRAREDLVPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLVDDRPRLACSTLAHQVAGKKVETVESLATQGTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRKNPSPSRDEIKAALAGNLCRCTGYVKIIKSVETAAAARLCE 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       

Chain D from PDB  Type:PROTEIN  Length:760
 aligned with HCRA_THAAR | O33819 from UniProtKB/Swiss-Prot  Length:769

    Alignment length:760
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758       768
           HCRA_THAAR     9 GTVGVRTPLVDGVEKVTGKAKYTADIAAPDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETPVPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDYEVLPAYMTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFAEADLIREKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGARTEGLHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEKVKAASGWEERKGKLPKGRGLGIALSHFVSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDNGRMVHGNILDYRVPTIVESPDIEVIIVESMDPNGPFGAKEASEGMLAGFLPAIHEAVYEAVGVRATDFPLSPDRITELLDAKEAA 768
               SCOP domains d1rm6d1 D:9-133 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, N-terminal domain                                         d1rm6d2 D:134-768 4-hydroxybenzoyl-CoA reductase alpha subunit HrcA, C-terminal domain                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains --------1rm6D01                1rm6D02 D:40-131  [code=3.90.1170.50, no name defined]                                      1rm6D03 D:132-187,D:284-359                             1rm6D01 D:17-39,D:188-283 Aldehyde Oxidoreductase; domain 4                                     1rm6D03 D:132-187,D:284-359 Aldehyde Oxidoreductase; domain 4               1rm6D04 D:360-446,D:620-768 Aldehyde Oxidoreductase; domain 4                          1rm6D05 D:447-619 Aldehyde Oxidoreductase; domain 4                                                                                                                          1rm6D04 D:360-446,D:620-768 Aldehyde Oxidoreductase; domain 4                                                                                         CATH domains
           Pfam domains (1) ----------------Ald_Xan_dh_C-1rm6D03 D:25-131                                                                              -------Ald_Xan_dh_C2-1rm6D01 D:139-703                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ----------------------------------------------------------------- Pfam domains (1)
           Pfam domains (2) ----------------Ald_Xan_dh_C-1rm6D04 D:25-131                                                                              -------Ald_Xan_dh_C2-1rm6D02 D:139-703                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ----------------------------------------------------------------- Pfam domains (2)
         Sec.struct. author ..........hhhhhhh....hhhhh.....eeeeeee.....eeeeeeehhhhhhh..eeeeee.hhh...................ee.....eeeeeee.hhhhhhhhhhhheeeeee.....hhhhhhh.............eeeeeeeee.hhhhhhhhh.eeeeeeeee...........eeeeeee....eeeeee...hhhhhhhhhhhhhh.hhh.eeee..............hhhhhhhhhhhhhhh.eeeee.hhhhhhhhh....eeeeeeeeee.....eeeeeeeeeee......hhhhhhhhhhhh.........eeeeeeee..............hhhhhhhhhhhhhhhhhhhh.hhhhhhhhh......ee.....ee...hhhhhhhhhhhhhhhhhhh......eeeeeeeeeee..............eeeeeee.....eeeee.......hhhhhhhhhhhhhhh.hhh.eeeee...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhh.eee...eeee.......eehhhhhhhhhh....eeeeeee..hhhhh...............eeeeeeeeeeee......eeeeeeeeeee.....hhhhhhhhhhhhhhhhhhhhhh....ee..ee.................eeeeeee......hhhhh.........hhhhhhhhhhhhhhh....ee..hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rm6 D   9 GTVGVRTPLVDGVEKVTGKAKYTADIAAPDALVGRILRSPHAHARILAIDTSAAEALEGVIAVCTGAETPVPFGVLPIAENEYPLARDKVRYRGDPVAAVAAIDEVTAEKALALIKVDYEVLPAYMTPKAAMKAGAIALHDDKPNNILREVHAEFGDVAAAFAEADLIREKTYTFAEVNHVHMELNATLAEYDPVRDMLTLNTTTQVPYYVHLKVAACLQMDSARIRVIKPFLGGGFGARTEALHFEIIAGLLARKAKGTVRLLQTREETFIAHRGRPWTEVKMKIGLKKDGKIAALALEATQAGGAYAGYGIITILYTGALMHGLYHIPAIKHDAWRVYTNTPPCGAMRGHGTVDTRAAFEALLTEMGEELGIDSLKIRQINMLPQIPYVTMYAQRVMSYGVPECLEKVKAASGWEERKGKLPKGRGLGIALSHFVSGTSTPKHWTGEPHATVNLKLDFDGGITLLTGAADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFMVGNASISAAEELKGVLVKAAAKKLDAREEDIEVIDEMFMVSGSQDPGLSFQEVVKAAMVDSGTITVKGTYTCPTEFQGDKKIRGSAIGATMGFCYAAQVVEASVDEITGKVTAHKVWVAVDVGKALNPLAVEGQTQGGVWMGMGQALSEETVYDNGRMVHGNILDYRVPTIVESPDIEVIIVESMDPNGPFGAKEASEGMLAGFLPAIHEAVYEAVGVRATDFPLSPDRITELLDAKEAA 768
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638       648       658       668       678       688       698       708       718       728       738       748       758       768

Chain E from PDB  Type:PROTEIN  Length:323
 aligned with HCRB_THAAR | O33820 from UniProtKB/Swiss-Prot  Length:324

    Alignment length:323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320   
           HCRB_THAAR     1 MNILTDFRTHRPATLADAVNALAAEATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDVAPALMVLDARAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPTGAWSAAYSKVRIRDAVDFPLAGVAAALQRDGDRIAGLRVAITGSNSAPLMVPVDALLGGNWDDAAAETLAQLVRKTSNVLRTTITGVKYRRRVLLAISRKVVDQLWEA 323
               SCOP domains d1rm6e2 E:1-216 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, N-terminal domain                                                                                                                                     d1rm6e1 E:217-323 4-hydroxybenzoyl-CoA reductase beta subunit HrcB, C-terminal domain                       SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1rm6E02 E:217-323  [code=3.30.390.50, no name defined]                                                      CATH domains
           Pfam domains (1) ----FAD_binding_5-1rm6E01 E:5-215                                                                                                                                                                                      ----CO_deh_flav_C-1rm6E03 E:220-320                                                                      --- Pfam domains (1)
           Pfam domains (2) ----FAD_binding_5-1rm6E02 E:5-215                                                                                                                                                                                      ----CO_deh_flav_C-1rm6E04 E:220-320                                                                      --- Pfam domains (2)
         Sec.struct. author .......eee...hhhhhhhhh....eeee....hhhhhhhh......eeee.........eee.....eeee...hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh..........hhhhhhhh..........................hhhhhhhhh..eeeeee..eeeeee.hhhh..............eeeeeee......eeeeeee..........eeeeeeeeee..eeeeeeeeee......ee..hhhhh....hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -FAD_PCMH  PDB: E:2-217 UniProt: 2-217                                                                                                                                                                                   ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rm6 E   1 MNILTDFRTHRPATLADAVNALAAEATLPLGAGTDLLPNLRRGLGHPAALVDLTGIDGLATISTLADGSLRIGAGATLEAIAEHDAIRTTWPALAQAAESVAGPTHRAAATLGGNLCQDTRCTFYNQSEWWRSGNGYCLKYKGDKCHVIVKSDRCYATYHGDVAPALMVLDARAEIVGPAGKRTVPVAQLFRESGAEHLTLEKGELLAAIEVPPTGAWSAAYSKVRIRDAVDFPLAGVAAALQRDGDRIAGLRVAITGSNSAPLMVPVDALLGGNWDDAAAETLAQLVRKTSNVLRTTITGVKYRRRVLLAISRKVVDQLWEA 323
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320   

Chain F from PDB  Type:PROTEIN  Length:157
 aligned with HCRC_THAAR | O33818 from UniProtKB/Swiss-Prot  Length:161

    Alignment length:157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       
           HCRC_THAAR     1 MKNILRLTLNGRAREDLVPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLVDDRPRLACSTLAHQVAGKKVETVESLATQGTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRKNPSPSRDEIKAALAGNLCRCTGYVRSSKSVETAAAARLCE 157
               SCOP domains d1rm6f2 F:1-81                                                                   d1rm6f1 F:82-157                                                             SCOP domains
               CATH domains 1rm6F01 F:1-78  [code=3.10.20.30, no name defined]                            1rm6F02 F:79-157  [code=1.10.150.120, no name defined]                          CATH domains
           Pfam domains (1) ------Fer2-1rm6F01 F:7-66                                         --------Fer2_2-1rm6F03 F:75-149                                                    -------- Pfam domains (1)
           Pfam domains (2) ------Fer2-1rm6F02 F:7-66                                         --------Fer2_2-1rm6F04 F:75-149                                                    -------- Pfam domains (2)
         Sec.struct. author .eeeeeeee..eeeeeeee...hhhhhhhhh..................eeee..eeee.hhhhhhhhh..eeehhhhh......hhhhhhhhhh.......hhhhhhhhhhhhhhhh...hhhhhhhhhh........hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (2) --2FE2S_FER_2  PDB: F:3-79 UniProt: 3-79                                       ------------------------------------------------------------------------------ PROSITE (2)
                PROSITE (3) ----------------------------------------2FE2S_FER------------------------------------------------------------------------------------------------------------ PROSITE (3)
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1rm6 F   1 MKNILRLTLNGRAREDLVPDNMLLLDYLRETVGLTGTKQGCDGGECGACTVLVDDRPRLACSTLAHQVAGKKVETVESLATQGTLSKLQAAFHEKLGTQCGFCTPGMIMASEALLRKNPSPSRDEIKAALAGNLCRCTGYVKIIKSVETAAAARLCE 157
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (6, 12)

Asymmetric/Biological Unit

(-) CATH Domains  (5, 16)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (6, 12)

Asymmetric/Biological Unit
(-)
Clan: FAD_PCMH (53)
(-)
Clan: Fer2 (69)

(-) Gene Ontology  (11, 19)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,D   (HCRA_THAAR | O33819)
molecular function
    GO:0018525    4-hydroxybenzoyl-CoA reductase activity    Catalysis of the reaction: benzoyl-CoA + oxidized ferredoxin + H2O = 4-hydroxybenzoyl-CoA + reduced ferredoxin.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Chain B,E   (HCRB_THAAR | O33820)
molecular function
    GO:0051539    4 iron, 4 sulfur cluster binding    Interacting selectively and non-covalently with a 4 iron, 4 sulfur (4Fe-4S) cluster; this cluster consists of four iron atoms, with the inorganic sulfur atoms found between the irons and acting as bridging ligands.
    GO:0018525    4-hydroxybenzoyl-CoA reductase activity    Catalysis of the reaction: benzoyl-CoA + oxidized ferredoxin + H2O = 4-hydroxybenzoyl-CoA + reduced ferredoxin.
    GO:0003824    catalytic activity    Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
    GO:0050660    flavin adenine dinucleotide binding    Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
    GO:0016614    oxidoreductase activity, acting on CH-OH group of donors    Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Chain C,F   (HCRC_THAAR | O33818)
molecular function
    GO:0051537    2 iron, 2 sulfur cluster binding    Interacting selectively and non-covalently with a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.
    GO:0018525    4-hydroxybenzoyl-CoA reductase activity    Catalysis of the reaction: benzoyl-CoA + oxidized ferredoxin + H2O = 4-hydroxybenzoyl-CoA + reduced ferredoxin.
    GO:0009055    electron carrier activity    Any molecular entity that serves as an electron acceptor and electron donor in an electron transport chain. An electron transport chain is a process in which a series of electron carriers operate together to transfer electrons from donors to any of several different terminal electron acceptors to generate a transmembrane electrochemical gradient.
    GO:0051536    iron-sulfur cluster binding    Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms.
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0016491    oxidoreductase activity    Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
biological process
    GO:0055114    oxidation-reduction process    A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        HCRA_THAAR | O338191sb3
        HCRB_THAAR | O338201sb3
        HCRC_THAAR | O338181sb3

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1RM6)