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(-) Description

Title :  CRYSTAL STRUCTURE OF TOP7: A COMPUTATIONALLY DESIGNED PROTEIN WITH A NOVEL FOLD
 
Authors :  B. Kuhlman, G. Dantas, G. C. Ireton, G. Varani, B. L. Stoddard, D. Baker
Date :  11 Sep 03  (Deposition) - 25 Nov 03  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Alpha-Beta, Computationally Designed, Novel Fold, De Novo Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  B. Kuhlman, G. Dantas, G. C. Ireton, G. Varani, B. L. Stoddard, D. Baker
Design Of A Novel Globular Protein Fold With Atomic-Level Accuracy
Science V. 302 1364 2003
PubMed-ID: 14631033  |  Reference-DOI: 10.1126/SCIENCE.1089427
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - TOP7
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPET29B(+)
    Expression System StrainBL21(DE3) PLYSS
    Expression System Taxid562
    Expression System Vector TypePLASMID
    Organism ScientificCOMPUTATIONALLY DESIGNED SEQUENCE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1MSE1Mod. Amino AcidSELENOMETHIONINE

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(no "SS Bond" information available for 1QYS)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:92
                                                                                                                           
               SCOP domains d1qysa_ A: Top7                                                                              SCOP domains
               CATH domains 1qysA00 A:3-94 top7, de novo designed protein                                                CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee....eeeeeeee...hhhhhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhhhhhhhhhh...eeeeeee..eeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------- Transcript
                  1qys A  3 DIQVQVNIDDNGKNFDYTYTVTTESELQKVLNELmDYIKKQGAKRVRISITARTKKEAEKFAAILIKVFAELGYNDINVTFDGDTVTVEGQL 94
                                    12        22        32    |   42        52        62        72        82        92  
                                                             37-MSE                                                     

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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

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