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(-) Description

Title :  THE STRUCTURAL DETERMINATION OF AN INSECT (MOSQUITO) STEROL CARRIER PROTEIN-2 WITH A LIGAND BOUND C16 FATTY ACID AT 1.35 A RESOLUTION
 
Authors :  D. H. Dyer, S. Lovell, J. B. Thoden, H. M. Holden, I. Rayment, Q. Lan
Date :  09 Jul 03  (Deposition) - 30 Sep 03  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.35
Chains :  Asym./Biol. Unit :  A
Keywords :  Alpha And Beta, Lipid Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. H. Dyer, S. Lovell, J. B. Thoden, H. M. Holden, I. Rayment, Q. Lan
The Structural Determination Of An Insect Sterol Carrier Protein-2 With A Ligand-Bound C16 Fatty Acid At 1. 35A Resolution
J. Biol. Chem. V. 278 39085 2003
PubMed-ID: 12855689  |  Reference-DOI: 10.1074/JBC.M306214200
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - STEROL CARRIER PROTEIN 2
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21
    Expression System Strain: BL21
    Expression System Taxid: 511693
    Expression System Vector Type: PGEX-4T-2 GST
    Organism Common: YELLOW FEVER MOSQUITO
    Organism Scientific: AEDES AEGYPTI
    Organism Taxid: 7159

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1PLM1Ligand/IonPALMITIC ACID

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:24 , GLN A:25 , VAL A:26 , ILE A:99 , PHE A:105 , HOH A:412 , HOH A:422BINDING SITE FOR RESIDUE PLM A 200

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1PZ4)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1PZ4)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 1PZ4)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:113
 aligned with Q86PR3_AEDAE | Q86PR3 from UniProtKB/TrEMBL  Length:110

    Alignment length:113
                               1                                                                                                             
                               |     7        17        27        37        47        57        67        77        87        97       107   
         Q86PR3_AEDAE     - ---MSLKSDEVFAKIAKRLESIDPANRQVEHVYKFRITQGGKVVKNWVMDLKNVKLVESDDAAEATLTMEDDIMFAIGTGALPAKEAMAQDKMEVDGQVELIFLLEPFIASLK 110
               SCOP domains d1pz4a_ A: Sterol carrier protein 2 (SCP2)                                                                        SCOP domains
               CATH domains 1pz4A00 A:-2-110 Nonspecific Lipid-transfer Protein; Chain A                                                      CATH domains
               Pfam domains -----------SCP2-1pz4A01 A:9-106                                                                              ---- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhh...........eeeeeeee..eeeeeeeee....eeee......eeeeeehhhhhhhhh...hhhhhhhh..eeeee.hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
                 1pz4 A  -2 GIRMSLKSDEVFAKIAKRLESIDPANRQVEHVYKFRITQGGKVVKNWVMDLKNVKLVESDDAAEATLTMEDDIMFAIGTGALPAKEAMAQDKMEVDGQVELIFLLEPFIASLK 110
                                     7        17        27        37        47        57        67        77        87        97       107
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: SCP2 (6)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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 Related Entries

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UniProtKB/TrEMBL
        Q86PR3_AEDAE | Q86PR3: 2ksh 2ksi

(-) Related Entries Specified in the PDB File

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