Chain A from PDB Type:PROTEIN Length:408
aligned with RHO_ECOLI | P0AG30 from UniProtKB/Swiss-Prot Length:419
Alignment length:417
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410
RHO_ECOLI 1 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK 417
SCOP domains d1pvoa1 A:1-47 d1pvoa2 A:48-126 Rho termination factor, RNA-binding domain d1pvoa3 A:129-417 T ranscription termination factor Rho, ATPase domain SCOP domains
CATH domains 1pvoA01 A:1-126 Nucleic acid-binding proteins 1pvoA02 A:129-417 P -loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhh..hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh.......eeeeeeee.....eeeehhhhh.......eeehhhhhhhh......eeeeeee........eeeeeeeee.......--..hhhhh........ee..----...hhhhhhhhhhhh.ee...eeeeee....hhhhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhhhh..eeeeee...hhhhhhhhhhhhhhhhhhhhh...eeeeee.hhhhhhhhhhhhh..---..........hhhhhhhhhhhee.....eeeeeeeee....hhhhhhhhhhh.....eeee.hhhhhhh......hhhhhee.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh....hhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pvo A 1 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPEN--NKILFENLTPLHANSRLRM----GSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPA---VLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK 417
10 20 30 40 50 60 70 80 90 100 110 120 | 130 140 | - | 160 170 180 190 200 210 220 230 240 250 260 270 280 | 290 300 310 320 330 340 350 360 370 380 390 400 410
126 | 147 152 280 284
129
Chain B from PDB Type:PROTEIN Length:358
aligned with RHO_ECOLI | P0AG30 from UniProtKB/Swiss-Prot Length:419
Alignment length:367
60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410
RHO_ECOLI 51 GDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK 417
SCOP domains d1pvob1 B:51-126 Rho termination factor, RNA-binding domain d1pvob2 B:129-417 T ranscription termination factor Rho, ATPase domain SCOP domains
CATH domains 1pvoB01 B:51-126 Nucleic acid-binding proteins 1pvoB02 B:129-417 P -loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ...eeee.....eeeehhhhh.......eeehhhhhh.......ee....ee.........ee.............--..hhhhh........ee..----..hhhhhhhhhhhhh.ee...eeeeee....hhhhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhhhh..eeeeee...hhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhh..---......hhhhhhhhhhhhhhhee.....eeeeeeeee....hhhhhhhhhhh.....eeee.hhhhhhh......hhhhhee.hhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pvo B 51 GDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPEN--NKILFENLTPLHANSRLRM----GSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPA---VLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK 417
60 70 80 90 100 110 120 | 130 140 | - | 160 170 180 190 200 210 220 230 240 250 260 270 280 | 290 300 310 320 330 340 350 360 370 380 390 400 410
126 | 147 152 280 284
129
Chain C from PDB Type:PROTEIN Length:408
aligned with RHO_ECOLI | P0AG30 from UniProtKB/Swiss-Prot Length:419
Alignment length:417
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410
RHO_ECOLI 1 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK 417
SCOP domains d1pvoc1 C:1-47 d1pvoc2 C:48-126 Rho termination factor, RNA-binding domain d1pvoc3 C:129-417 T ranscription termination factor Rho, ATPase domain SCOP domains
CATH domains 1pvoC01 C:1-126 Nucleic acid-binding proteins 1pvoC02 C:129-417 P -loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh.hhhhhhhhhhhh........hhhhhhhhhhhhh........eeeeeee.....eeeehhhhh.......eeehhhhhhhh......eeee.ee.........ee....ee.......--..hhhhh............----..hhhhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhhhh..eeeeee...hhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhh...---.ee..ee...hhhhhhhhhhhee.....eeeeeeeee....hhhhhhhhhhhh....eeee.hhhhhhh...........ee.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhhhhhhh. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pvo C 1 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPEN--NKILFENLTPLHANSRLRM----GSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPA---VLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK 417
10 20 30 40 50 60 70 80 90 100 110 120 | 130 140 | - | 160 170 180 190 200 210 220 230 240 250 260 270 280 | 290 300 310 320 330 340 350 360 370 380 390 400 410
126 | 147 152 280 284
129
Chain D from PDB Type:PROTEIN Length:408
aligned with RHO_ECOLI | P0AG30 from UniProtKB/Swiss-Prot Length:419
Alignment length:417
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410
RHO_ECOLI 1 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK 417
SCOP domains d1pvod1 D:1-47 d1pvod2 D:48-126 Rho termination factor, RNA-binding domain d1pvod3 D:129-417 T ranscription termination factor Rho, ATPase domain SCOP domains
CATH domains 1pvoD01 D:1-126 Nucleic acid-binding proteins 1pvoD02 D:129-417 P -loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhh.hhhhhhhhhhh.........hhhhhhhhhhhhhh......eeeeeeee.....eeeehhhhh.......eeehhhhhhhhh.....eeeeeee.........eeeeeeee.......--..hhhhh............----..hhhhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhhhh..eeeeee...hhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhh..---......hhhhhhhhhhhhhh.ee.....eeeeeeeee....hhhhhhhhhh......eeee.hhhhhhh...........ee.hhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..hhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pvo D 1 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPEN--NKILFENLTPLHANSRLRM----GSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPA---VLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK 417
10 20 30 40 50 60 70 80 90 100 110 120 | 130 140 | - | 160 170 180 190 200 210 220 230 240 250 260 270 280 | 290 300 310 320 330 340 350 360 370 380 390 400 410
126 | 147 152 280 284
129
Chain E from PDB Type:PROTEIN Length:407
aligned with RHO_ECOLI | P0AG30 from UniProtKB/Swiss-Prot Length:419
Alignment length:417
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410
RHO_ECOLI 1 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK 417
SCOP domains d1pvoe1 E:1-47 d1pvoe2 E:48-126 Rho termination factor, RNA-binding domain d1pvoe3 E:129-417 T ranscription termination factor Rho, ATPase domain SCOP domains
CATH domains 1pvoE01 E:1-126 Nucleic acid-binding proteins 1pvoE02 E:129-417 P -loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhh..hhhhhhhhhhh....hhhhhhhhhhhhhhhhh........eeeeeeee.....eeeehhhhh.......eeehhhhhhhh......eeeeeee.........eeeeeeee.......--..hhhhh........ee..----...hhhhhhhhhhhh.ee...eeeeee....hhhhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh....eeeeee...hhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhh..----.........hhhhhhhhhh.ee.....eeeeeeeee....hhhhhhhhhh......eeee.hhhhhhh......hhhhhee.hhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh....hhhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pvo E 1 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPEN--NKILFENLTPLHANSRLRM----GSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPA----LTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK 417
10 20 30 40 50 60 70 80 90 100 110 120 | 130 140 | - | 160 170 180 190 200 210 220 230 240 250 260 270 280 | 290 300 310 320 330 340 350 360 370 380 390 400 410
126 | 147 152 280 285
129
Chain F from PDB Type:PROTEIN Length:408
aligned with RHO_ECOLI | P0AG30 from UniProtKB/Swiss-Prot Length:419
Alignment length:417
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290 300 310 320 330 340 350 360 370 380 390 400 410
RHO_ECOLI 1 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK 417
SCOP domains d1pvof1 F:1-47 d1pvof2 F:48-126 Rho termination factor, RNA-binding domain d1pvof3 F:129-417 T ranscription termination factor Rho, ATPase domain SCOP domains
CATH domains 1pvoF01 F:1-126 Nucleic acid-binding proteins 1pvoF02 F:129-417 P -loop containing nucleotide triphosphate hydrolases CATH domains
Pfam domains (1) ----Rho_N-1pvoF01 F:5-47 -Rho_RNA_bind-1pvoF06 F:49-126 ------------------- -----ATP-synt_ab-1pvoF12 F:157-365 ---------------------------------------------------- Pfam domains (1)
Pfam domains (2) ----Rho_N-1pvoF02 F:5-47 -Rho_RNA_bind-1pvoF07 F:49-126 ------------------- -----ATP-synt_ab-1pvoF13 F:157-365 ---------------------------------------------------- Pfam domains (2)
Pfam domains (3) ----Rho_N-1pvoF03 F:5-47 -Rho_RNA_bind-1pvoF08 F:49-126 ------------------- -----ATP-synt_ab-1pvoF14 F:157-365 ---------------------------------------------------- Pfam domains (3)
Pfam domains (4) ----Rho_N-1pvoF04 F:5-47 -Rho_RNA_bind-1pvoF09 F:49-126 ------------------- -----ATP-synt_ab-1pvoF15 F:157-365 ---------------------------------------------------- Pfam domains (4)
Pfam domains (5) ----Rho_N-1pvoF05 F:5-47 -Rho_RNA_bind-1pvoF10 F:49-126 ------------------- -----ATP-synt_ab-1pvoF16 F:157-365 ---------------------------------------------------- Pfam domains (5)
Pfam domains (6) ------------------------------------------------Rho_RNA_bind-1pvoF11 F:49-126 ------------------- -----ATP-synt_ab-1pvoF17 F:157-365 ---------------------------------------------------- Pfam domains (6)
Sec.struct. author .hhhhhhh.hhhhhhhhhhh.........hhhhhhhhhhhhhh......eeeeeeee.....eeee............eeehhhhhhhhh.....eeeeeee.........ee.............--...................----..hhhhhhhhhhhhh......eeeeee....hhhhhhhhhhhhhhhhh...eeeeeeeeehhhhhhhhhh....eeeeee...hhhhhhhhhhhhhhhhhhhhhh..eeeeeeehhhhhhhhhhhhh..---..........hhhhhhhhh..ee.....eeeeeeeee....hhhhhhhhhh......eeee.hhhhhhh......hhhhhee.hhhhh.hhhhhhhhhhhhhh....hhhhhhhhhhhhhh.....hhhhhh.. Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1pvo F 1 MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVNFDKPEN--NKILFENLTPLHANSRLRM----GSTEDLTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPA---VLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFEMMK 417
10 20 30 40 50 60 70 80 90 100 110 120 | 130 140 | - | 160 170 180 190 200 210 220 230 240 250 260 270 280 | 290 300 310 320 330 340 350 360 370 380 390 400 410
126 | 147 152 280 284
129
Chain G from PDB Type:RNA Length:2
1pvo G 1 UC 2
Chain H from PDB Type:RNA Length:2
1pvo H 1 UC 2
Chain J from PDB Type:RNA Length:2
1pvo J 1 UC 2
Chain K from PDB Type:RNA Length:2
1pvo K 1 UC 2
Chain L from PDB Type:RNA Length:2
1pvo L 1 UC 2
Legend: |
|
→ Mismatch |
(orange background) |
|
- |
→ Gap |
(green background, '-', border residues have a numbering label) |
|
|
→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
|
x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
|
extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |