Chain A from PDB Type:PROTEIN Length:290
aligned with SFGH_YEAST | P40363 from UniProtKB/Swiss-Prot Length:299
Alignment length:299
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290
SFGH_YEAST 1 MKVVKEFSVCGGRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNLGLI 299
SCOP domains d1pv1a_ A: Hypothetical esterase YJL068C SCOP domains
CATH domains 1pv1A00 A:1-299 [code=3.40.50.1820, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeee..eeeeeeeee......eeeeeeee................eeeee......hhhhhhhhhhhhhhhhhh.eeee...............................hhhhhh..hhhhhhhhhhhhhhhhhhh-----.......eeeeeehhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhh..----hhhhhhhhhhhhh.......eeee.............hhhhhhhhh.......eeee.......hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: A:1-299 (gaps) UniProt: 1-299 Transcript 1
1pv1 A 1 MKVVKEFSVCGGRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFN-----KLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGE----WEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNLGLI 299
10 20 30 40 50 60 70 80 90 100 110 120 130 140 | 150 160 170 180 190 200 | - | 220 230 240 250 260 270 280 290
142 148 208 213
Chain B from PDB Type:PROTEIN Length:290
aligned with SFGH_YEAST | P40363 from UniProtKB/Swiss-Prot Length:299
Alignment length:299
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290
SFGH_YEAST 1 MKVVKEFSVCGGRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNLGLI 299
SCOP domains d1pv1b_ B: Hypothetical esterase YJL068C SCOP domains
CATH domains 1pv1B00 B:1-299 [code=3.40.50.1820, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeee..eeeeeeeeee....eeeeeeeee................eeeee......hhhhhhhhhhhhhhhhhh.eeeee......................................hhhhhhhhhhhhhhhhhhh-----.......eeeee.hhhhhhhhhhhhhhhhhh...eeeee........hhhhhhhhhhhh..----....hhhhhhhhh.......eeee.............hhhhhhhhh.......eeee.......hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: B:1-299 (gaps) UniProt: 1-299 Transcript 1
1pv1 B 1 MKVVKEFSVCGGRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFN-----KLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGE----WEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNLGLI 299
10 20 30 40 50 60 70 80 90 100 110 120 130 140 | 150 160 170 180 190 200 | - | 220 230 240 250 260 270 280 290
142 148 208 213
Chain C from PDB Type:PROTEIN Length:290
aligned with SFGH_YEAST | P40363 from UniProtKB/Swiss-Prot Length:299
Alignment length:299
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290
SFGH_YEAST 1 MKVVKEFSVCGGRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNLGLI 299
SCOP domains d1pv1c_ C: Hypothetical esterase YJL068C SCOP domains
CATH domains 1pv1C00 C:1-299 [code=3.40.50.1820, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeeee..eeeeeeeee......eeeeeeee.........hhhhhh.eeeee......hhhhhhhhhhhhhhhhhh.eeeee..............................hhhhhh..hhhhhhhhhhhhhhhhhhh-----.......eeeeeehhhhhhhhhhhhhh.......eeeee........hhhhhhhhhhh...----....hhhhhh..........eeee......hhhhhh.hhhhhhhh........eeee.......hhhhhhhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: C:1-299 (gaps) UniProt: 1-299 Transcript 1
1pv1 C 1 MKVVKEFSVCGGRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFN-----KLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGE----WEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNLGLI 299
10 20 30 40 50 60 70 80 90 100 110 120 130 140 | 150 160 170 180 190 200 | - | 220 230 240 250 260 270 280 290
142 148 208 213
Chain D from PDB Type:PROTEIN Length:290
aligned with SFGH_YEAST | P40363 from UniProtKB/Swiss-Prot Length:299
Alignment length:299
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 270 280 290
SFGH_YEAST 1 MKVVKEFSVCGGRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGEEKAQWEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNLGLI 299
SCOP domains d1pv1d_ D: Hypothetical esterase YJL068C SCOP domains
CATH domains 1pv1D00 D:1-299 [code=3.40.50.1820, no name defined] CATH domains
Pfam domains (1) --------------------Esterase-1pv1D01 D:21-291 -------- Pfam domains (1)
Pfam domains (2) --------------------Esterase-1pv1D02 D:21-291 -------- Pfam domains (2)
Pfam domains (3) --------------------Esterase-1pv1D03 D:21-291 -------- Pfam domains (3)
Pfam domains (4) --------------------Esterase-1pv1D04 D:21-291 -------- Pfam domains (4)
Sec.struct. author .eeeeeeee..eeeeeeeee......eeeeeeee................eeeee......hhhhhhhhhhhhhhhhhh.eeeee..............................hhhhhh..hhhhhhhhhhhhhhhhhhh-----.......eeeee.hhhhhhhhhhhhhhhhhh...eeee.........hhhhhhhhhhhh..----....hhhhhh..........eeee.............hhhhhhh.........eeee.......hhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript 1 Exon 1.1 PDB: D:1-299 (gaps) UniProt: 1-299 Transcript 1
1pv1 D 1 MKVVKEFSVCGGRLIKLSHNSNSTKTSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRGDEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFN-----KLDFLDNVAITGHSMGGYGAICGYLKGYSGKRYKSCSAFAPIVNPSNVPWGQKAFKGYLGE----WEAYDPCLLIKNIRHVGDDRILIHVGDSDPFLEEHLKPELLLEAVKATSWQDYVEIKKVHGFDHSYYFVSTFVPEHAEFHARNLGLI 299
10 20 30 40 50 60 70 80 90 100 110 120 130 140 | 150 160 170 180 190 200 | - | 220 230 240 250 260 270 280 290
142 148 208 213
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |