Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF A CELL DIVISION AND CELL WALL BIOSYNTHESIS PROTEIN UPF0040 FROM MYCOPLASMA PNEUMONIAE: INDICATION OF A NOVEL FOLD WITH A POSSIBLE NEW CONSERVED SEQUENCE MOTIF
 
Authors :  S. Chen, J. Jancrick, H. Yokota, R. Kim, S. -H. Kim, Berkeley Structural Genomics Center (Bsgc)
Date :  13 Oct 02  (Deposition) - 21 Oct 03  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.80
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H
Keywords :  Cell Division, Cell Wall Biosynthesis Protein, Structural Genomics, Bsgc Structure Funded By Nih, Protein Structure Initiative, Psi, Berkeley Structural Genomics Center, Biosynthetic Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Chen, J. Jancrick, H. Yokota, R. Kim, S. -H. Kim
Crystal Structure Of A Protein Associated With Cell Division From Mycoplasma Pneumoniae (Gi: 13508053): A Novel Fold With A Conserved Sequence Motif.
Proteins V. 55 785 2004
PubMed-ID: 15146477  |  Reference-DOI: 10.1002/PROT.10593
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PROTEIN MRAZ
    Chains: A, B, C, D, E, F, G, H
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Scientific: MYCOPLASMA PNEUMONIAE
    Organism Taxid: 2104
    Synonym: UPF0040 PFAM PROTEIN

 Structural Features

(-) Chains, Units

  12345678
Asymmetric/Biological Unit : ABCDEFGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1N0F)

(-) Sites  (0, 0)

(no "Site" information available for 1N0F)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1N0F)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1N0F)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1N0F)

(-) PROSITE Motifs  (1, 16)

Asymmetric/Biological Unit (1, 16)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1SPOVT_ABRBPS51740 SpoVT-AbrB domain profile.MRAZ_MYCPN5-47
 
 
 
 
 
 
 
76-119
 
 
 
 
 
 
 		  16A:30-72
B:30-72
C:30-72
D:30-72
E:30-72
F:30-72
G:30-72
H:30-72
A:101-144
B:101-144
C:101-144
D:101-144
E:101-144
F:101-144
G:101-144
H:101-144

(-) Exons   (0, 0)

(no "Exon" information available for 1N0F)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:141
 aligned with MRAZ_MYCPN | P75467 from UniProtKB/Swiss-Prot  Length:141

    Alignment length:141
                                1                                                                                                                                        
                                |    6        16        26        36        46        56        66        76        86        96       106       116       126       136 
           MRAZ_MYCPN     - ----MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 137
               SCOP domains d1n0fa_ A: Hypothetical protein MraZ                                                                                                          SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeee......eee..hhhhhhh..ee..........ee.hhhhhhhhhhhhhh....hhhhhhhhhhhhh....ee.....eee.hhhhhhhh.....eeeee....eeeeehhhhhhhhhh..hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------SPOVT_ABRB  PDB: A:30-72 UniProt: 5-47     ----------------------------SPOVT_ABRB  PDB: A:101-144 UniProt: 76-119  ------------------ PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1n0f A  22 FQGHMLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 162
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161 


Chain B from PDB  Type:PROTEIN  Length:139
 aligned with MRAZ_MYCPN | P75467 from UniProtKB/Swiss-Prot  Length:141

    Alignment length:139
                              1                                                                                                                                        
                              |      8        18        28        38        48        58        68        78        88        98       108       118       128         
           MRAZ_MYCPN     - --MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 137
               SCOP domains d1n0fb_ B: Hypothetical protein MraZ                                                                                                        SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee......eee..hhhhhhh..ee..........ee.hhhhhhhhhhhhhh....hhhhhhhhhhhhh....ee.....eee.hhhhhhhh.....eeeee....eeeeehhhhhhhhhh..hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------SPOVT_ABRB  PDB: B:30-72 UniProt: 5-47     ----------------------------SPOVT_ABRB  PDB: B:101-144 UniProt: 76-119  ------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1n0f B  24 GHMLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 162
                                    33        43        53        63        73        83        93       103       113       123       133       143       153         


Chain C from PDB  Type:PROTEIN  Length:137
 aligned with MRAZ_MYCPN | P75467 from UniProtKB/Swiss-Prot  Length:141

    Alignment length:137
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       
           MRAZ_MYCPN     1 MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 137
               SCOP domains d1n0fc_ C: Hypothetical protein MraZ                                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee......eee..hhhhhhh..ee..........ee.hhhhhhhhhhhhhh....hhhhhhhhhhhhh....ee.....eee.hhhhhhhh.....eeeee....eeeeehhhhhhhhhh..hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----SPOVT_ABRB  PDB: C:30-72 UniProt: 5-47     ----------------------------SPOVT_ABRB  PDB: C:101-144 UniProt: 76-119  ------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1n0f C  26 MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 162
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       


Chain D from PDB  Type:PROTEIN  Length:137
 aligned with MRAZ_MYCPN | P75467 from UniProtKB/Swiss-Prot  Length:141

    Alignment length:137
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       
           MRAZ_MYCPN     1 MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 137
               SCOP domains d1n0fd_ D: Hypothetical protein MraZ                                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee......eee..hhhhhhh..ee..........ee.hhhhhhhhhhhhhh....hhhhhhhhhhhhh....ee.....eee.hhhhhhhh.....eeeee....eeeeehhhhhhhhhh..hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----SPOVT_ABRB  PDB: D:30-72 UniProt: 5-47     ----------------------------SPOVT_ABRB  PDB: D:101-144 UniProt: 76-119  ------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1n0f D  26 MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 162
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       


Chain E from PDB  Type:PROTEIN  Length:137
 aligned with MRAZ_MYCPN | P75467 from UniProtKB/Swiss-Prot  Length:141

    Alignment length:137
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       
           MRAZ_MYCPN     1 MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 137
               SCOP domains d1n0fe_ E: Hypothetical protein MraZ                                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee......eee..hhhhhhh..ee..........ee.hhhhhhhhhhhhhh....hhhhhhhhhhhhh....ee.....eee.hhhhhhhh.....eeeee....eeeeehhhhhhhhhh..hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----SPOVT_ABRB  PDB: E:30-72 UniProt: 5-47     ----------------------------SPOVT_ABRB  PDB: E:101-144 UniProt: 76-119  ------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1n0f E  26 MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 162
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       


Chain F from PDB  Type:PROTEIN  Length:137
 aligned with MRAZ_MYCPN | P75467 from UniProtKB/Swiss-Prot  Length:141

    Alignment length:137
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       
           MRAZ_MYCPN     1 MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 137
               SCOP domains d1n0ff_ F: Hypothetical protein MraZ                                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee......eee..hhhhhhh..ee..........ee.hhhhhhhhhhhhhh....hhhhhhhhhhhhh....ee.....eee.hhhhhhhh.....eeeee....eeeeehhhhhhhhhh..hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----SPOVT_ABRB  PDB: F:30-72 UniProt: 5-47     ----------------------------SPOVT_ABRB  PDB: F:101-144 UniProt: 76-119  ------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1n0f F  26 MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 162
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       


Chain G from PDB  Type:PROTEIN  Length:137
 aligned with MRAZ_MYCPN | P75467 from UniProtKB/Swiss-Prot  Length:141

    Alignment length:137
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       
           MRAZ_MYCPN     1 MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 137
               SCOP domains d1n0fg_ G: Hypothetical protein MraZ                                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeee......eee..hhhhhhh..ee..........ee.hhhhhhhhhhhhhh....hhhhhhhhhhhhh....ee.....eee.hhhhhhhh.....eeeee....eeeeehhhhhhhhhh..hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----SPOVT_ABRB  PDB: G:30-72 UniProt: 5-47     ----------------------------SPOVT_ABRB  PDB: G:101-144 UniProt: 76-119  ------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1n0f G  26 MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 162
                                    35        45        55        65        75        85        95       105       115       125       135       145       155       


Chain H from PDB  Type:PROTEIN  Length:137
 aligned with MRAZ_MYCPN | P75467 from UniProtKB/Swiss-Prot  Length:141

    Alignment length:137
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       
           MRAZ_MYCPN     1 MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 137
               SCOP domains d1n0fh_ H: Hypothetical protein MraZ                                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------- CATH domains
           Pfam domains (1) -----------------------------------------------------------------------MraZ-1n0fH01 H:97-162                                              Pfam domains (1)
           Pfam domains (2) -----------------------------------------------------------------------MraZ-1n0fH02 H:97-162                                              Pfam domains (2)
           Pfam domains (3) -----------------------------------------------------------------------MraZ-1n0fH03 H:97-162                                              Pfam domains (3)
           Pfam domains (4) -----------------------------------------------------------------------MraZ-1n0fH04 H:97-162                                              Pfam domains (4)
           Pfam domains (5) -----------------------------------------------------------------------MraZ-1n0fH05 H:97-162                                              Pfam domains (5)
           Pfam domains (6) -----------------------------------------------------------------------MraZ-1n0fH06 H:97-162                                              Pfam domains (6)
           Pfam domains (7) -----------------------------------------------------------------------MraZ-1n0fH07 H:97-162                                              Pfam domains (7)
           Pfam domains (8) -----------------------------------------------------------------------MraZ-1n0fH08 H:97-162                                              Pfam domains (8)
           Pfam domains (9) -----------------------------------------------------------------------MraZ-1n0fH09 H:97-162                                              Pfam domains (9)
          Pfam domains (10) -----------------------------------------------------------------------MraZ-1n0fH10 H:97-162                                              Pfam domains (10)
          Pfam domains (11) -----------------------------------------------------------------------MraZ-1n0fH11 H:97-162                                              Pfam domains (11)
          Pfam domains (12) -----------------------------------------------------------------------MraZ-1n0fH12 H:97-162                                              Pfam domains (12)
          Pfam domains (13) -----------------------------------------------------------------------MraZ-1n0fH13 H:97-162                                              Pfam domains (13)
          Pfam domains (14) -----------------------------------------------------------------------MraZ-1n0fH14 H:97-162                                              Pfam domains (14)
          Pfam domains (15) -----------------------------------------------------------------------MraZ-1n0fH15 H:97-162                                              Pfam domains (15)
          Pfam domains (16) -----------------------------------------------------------------------MraZ-1n0fH16 H:97-162                                              Pfam domains (16)
         Sec.struct. author ......................................................................................................................................... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----SPOVT_ABRB  PDB: H:30-72 UniProt: 5-47     ----------------------------SPOVT_ABRB  PDB: H:101-144 UniProt: 76-119  ------------------ PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1n0f H  26 MLLGTFNITLDAKNRISLPAKLRAFFEGSIVINRGFENCLEVRKPQDFQKYFEQFNSFPSTQKDTRTLKRLIFANANFVDVDTAGRVLIPNNLINDAKLDKEIVLIGQFDHLEIWDKKLYEDYLANSESLETVAERM 162
                                    35        45        55        65        75        85        95       105       115       125       135       145       155
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 8)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1N0F)

(-) Pfam Domains  (1, 16)

Asymmetric/Biological Unit
(-)
Clan: AbrB (11)
(-)
Family: MraZ (3)
(-)
Mycoplasma pneumoniae (3)
1aMraZ-1n0fH01H:97-162
1bMraZ-1n0fH02H:97-162
1cMraZ-1n0fH03H:97-162
1dMraZ-1n0fH04H:97-162
1eMraZ-1n0fH05H:97-162
1fMraZ-1n0fH06H:97-162
1gMraZ-1n0fH07H:97-162
1hMraZ-1n0fH08H:97-162
1iMraZ-1n0fH09H:97-162
1jMraZ-1n0fH10H:97-162
1kMraZ-1n0fH11H:97-162
1lMraZ-1n0fH12H:97-162
1mMraZ-1n0fH13H:97-162
1nMraZ-1n0fH14H:97-162
1oMraZ-1n0fH15H:97-162
1pMraZ-1n0fH16H:97-162

(-) Gene Ontology  (6, 6)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C,D,E,F,G,H   (MRAZ_MYCPN | P75467)
molecular function
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
    GO:0003700    transcription factor activity, sequence-specific DNA binding    Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
biological process
    GO:0006355    regulation of transcription, DNA-templated    Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
    GO:0006351    transcription, DNA-templated    The cellular synthesis of RNA on a template of DNA.
cellular component
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0009295    nucleoid    The region of a virus, bacterial cell, mitochondrion or chloroplast to which the nucleic acid is confined.

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 1n0f)
 
  Sites
(no "Sites" information available for 1n0f)
 
  Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 1n0f)
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  1n0f
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  MRAZ_MYCPN | P75467
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  MRAZ_MYCPN | P75467
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MRAZ_MYCPN | P75467: 1n0e 1n0g

(-) Related Entries Specified in the PDB File

1n0e CRYSTAL STRUCTURE OF A CELL DIVISION AND CELL WALL BIOSYNTHESIS PROTEIN UPF0040 FROM MYCOPLASMA PNEUMONIAE: INDICATION OF A NOVEL FOLD WITH A POSSIBLE NEW CONSERVED SEQUENCE MOTIF
1n0g CRYSTAL STRUCTURE OF A CELL DIVISION AND CELL WALL BIOSYNTHESIS PROTEIN UPF0040 FROM MYCOPLASMA PNEUMONIAE: INDICATION OF A NOVEL FOLD WITH A POSSIBLE NEW CONSERVED SEQUENCE MOTIF RELATED ID: BSGCAIR30390 RELATED DB: TARGETDB