Chain A from PDB Type:PROTEIN Length:240
aligned with NUSG_AQUAE | O67757 from UniProtKB/Swiss-Prot Length:248
Alignment length:240
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248
NUSG_AQUAE 9 LEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKYRLSLKGNARDISVLGKKGVTTFRIENGEVKVVESVEGDTCVNAPPISKPGQKITCKENKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNILNQIKRGVKPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI 248
SCOP domains d1m1ga3 A:9-50,A:132-190 d1m1ga1 A:51-131 N-utilization substance G protein NusG, insert domain d1m1ga3 A:9-50,A:132-190 d1m1ga2 A:191-248 SCOP domains
CATH domains 1m1gA01 A:9-49,A:132-185 1m1gA02 A:50-131 NusG, domain 2 1m1gA01 A:9-49,A:132-185 1m1gA03 A:186-247 [code=2.30.30.30, no name defined] - CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ...eeeeeee...hhhhhhhhhhhhhhhhh....eeeee...eeeeeeee...eeeeee.....eeeeee....eeeeeee..eeeeee....hhhhhh........eeee....eeeeeeee......eeeeee..hhhhhhhhhhh..eeee.ee..ee.eehhhhhhhhhhhhhh.............eeee........eeeeeeee....eeeeeeee..eeeeeeee...eeee Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NUSG -------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1m1g A 9 LEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKYRLSLKGNARDISVLGKKGVTTFRIENGEVKVVESVEGDTCVNAPPISKPGQKITCKENKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNILNQIKRGVKPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI 248
18 28 38 48 58 68 78 88 98 108 118 128 138 148 158 168 178 188 198 208 218 228 238 248
Chain B from PDB Type:PROTEIN Length:242
aligned with NUSG_AQUAE | O67757 from UniProtKB/Swiss-Prot Length:248
Alignment length:242
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246
NUSG_AQUAE 7 QELEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKYRLSLKGNARDISVLGKKGVTTFRIENGEVKVVESVEGDTCVNAPPISKPGQKITCKENKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNILNQIKRGVKPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI 248
SCOP domains d1m1gb3 B:7-50,B:132-190 d1m1gb1 B:51-131 N-utilization substance G protein NusG, insert domain d1m1gb3 B:7-50,B:132-190 d1m1gb2 B:191-248 SCOP domains
CATH domains --1m1gB01 B:9-49,B:132-185 1m1gB02 B:50-131 NusG, domain 2 1m1gB01 B:9-49,B:132-185 1m1gB03 B:186-248 [code=2.30.30.30, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eeeeeee...hhhhhhhhhhhhhhhhhhhh.eeeee...eeeeeeee...eeeeee.....eeeeee....eeeeee....eeeee....hhhhh.........eeee....eeeeeeee......eeeeee..hhhhhhhhhh...eeee.ee..ee.eehhhhhhhhhh.................eeee........eeee.........eeeeeee..eeeeeeehhh.eee. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NUSG -------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m1g B 7 QELEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKYRLSLKGNARDISVLGKKGVTTFRIENGEVKVVESVEGDTCVNAPPISKPGQKITCKENKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNILNQIKRGVKPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI 248
16 26 36 46 56 66 76 86 96 106 116 126 136 146 156 166 176 186 196 206 216 226 236 246
Chain C from PDB Type:PROTEIN Length:244
aligned with NUSG_AQUAE | O67757 from UniProtKB/Swiss-Prot Length:248
Alignment length:244
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244
NUSG_AQUAE 5 QVQELEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKYRLSLKGNARDISVLGKKGVTTFRIENGEVKVVESVEGDTCVNAPPISKPGQKITCKENKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNILNQIKRGVKPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI 248
SCOP domains d1m1gc3 C:5-50,C:132-190 d1m1gc1 C:51-131 N-utilization substance G protein NusG, insert domain d1m1gc3 C:5-50,C:132-190 d1m1gc2 C:191-248 SCOP domains
CATH domains ----1m1gC01 C:9-49,C:132-185 1m1gC02 C:50-131 NusG, domain 2 1m1gC01 C:9-49,C:132-185 1m1gC03 C:186-247 [code=2.30.30.30, no name defined] - CATH domains
Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .......eeeeeee...hhhhhhhhhhhhhhhhhhhh.eeeee...eeeeeeee...eeeeee.....eeeeee....eeeeee....eeeee.....hhhhh........eeee....eeeeeeee......eeeeee..hhhhhhhhhh...eeee.ee..ee...hhhhhhhhhhhhh..............eeee........eeeeeeee....eeeeeeee..eeeeeeee...eee. Sec.struct. author
SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NUSG -------- PROSITE
Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m1g C 5 QVQELEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKYRLSLKGNARDISVLGKKGVTTFRIENGEVKVVESVEGDTCVNAPPISKPGQKITCKENKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNILNQIKRGVKPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI 248
14 24 34 44 54 64 74 84 94 104 114 124 134 144 154 164 174 184 194 204 214 224 234 244
Chain D from PDB Type:PROTEIN Length:239
aligned with NUSG_AQUAE | O67757 from UniProtKB/Swiss-Prot Length:248
Alignment length:239
19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239
NUSG_AQUAE 10 EKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKYRLSLKGNARDISVLGKKGVTTFRIENGEVKVVESVEGDTCVNAPPISKPGQKITCKENKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNILNQIKRGVKPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI 248
SCOP domains d1m1gd3 D:10-50,D:132-190 d1m1gd1 D:51-131 N-utilization substance G protein NusG, insert domain d1m1gd3 D:10-50,D:132-190 d1m1gd2 D:191-248 SCOP domains
CATH domains 1m1gD01 D:10-49,D:132-185 1m1gD02 D:50-131 NusG, domain 2 1m1gD01 D:10-49,D:132-185 1m1gD03 D:186-248 [code=2.30.30.30, no name defined] CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ..eeeeeee...hhhhhhhhhhhhhhhh.hhh.eeeee...eeeeeeee...eeeeee......eeeee....eeeeee....eeeee....hhhhh.........eeee....eeeeeeee......eeeeee..hhhhhhhhhhh..eeee.ee..ee...hhhhhhhhhhhhhhh............................................................. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NUSG -------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1m1g D 10 EKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKYRLSLKGNARDISVLGKKGVTTFRIENGEVKVVESVEGDTCVNAPPISKPGQKITCKENKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMVGGKPVPLKEEEVQNILNQIKRGVKPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI 248
19 29 39 49 59 69 79 89 99 109 119 129 139 149 159 169 179 189 199 209 219 229 239
Legend: |
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(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |