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(-) Description

Title :  SOLUTION STRUCTURE OF THE BETA DOMAIN OF MT_NC
 
Authors :  C. Capasso, V. Carginale, O. Crescenzi, D. Di Maro, E. Parisi, R. Spadaccini, P. A. Temussi
Date :  13 Jun 02  (Deposition) - 06 May 03  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
Keywords :  Cadmium Thiolate-Cluster, Metal Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Capasso, V. Carginale, O. Crescenzi, D. Di Maro, E. Parisi, R. Spadaccini, P. A. Temussi
Solution Structure Of Mt_nc, A Novel Metallothionein From The Antarctic Fish Notothenia Coriiceps.
Structure V. 11 435 2003
PubMed-ID: 12679021  |  Reference-DOI: 10.1016/S0969-2126(03)00044-3
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - METALLOTHIONEIN MT_NC
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PGEM-MT
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: BETA DOMAIN
    Organism Common: YELLOWBELLY ROCKCOD
    Organism Scientific: NOTOTHENIA CORIICEPS
    Organism Taxid: 8208
    Synonym: METALLOTHIONEIN A

 Structural Features

(-) Chains, Units

  
NMR Structure (20x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

NMR Structure (1, 3)
No.NameCountTypeFull Name
1CD3Ligand/IonCADMIUM ION

(-) Sites  (3, 3)

NMR Structure (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS A:12 , CYS A:18 , CYS A:20 , CYS A:31BINDING SITE FOR RESIDUE CD A 101
2AC2SOFTWARECYS A:20 , CYS A:24 , CYS A:29 , CYS A:34BINDING SITE FOR RESIDUE CD A 102
3AC3SOFTWARECYS A:10 , CYS A:12 , CYS A:26 , CYS A:29BINDING SITE FOR RESIDUE CD A 103

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1M0J)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1M0J)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1M0J)

(-) PROSITE Motifs  (1, 1)

NMR Structure (1, 1)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1METALLOTHIONEIN_VRTPS00203 Vertebrate metallothioneins signature.MTA_NOTNE12-30  1A:18-35

(-) Exons   (0, 0)

(no "Exon" information available for 1M0J)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:28
 aligned with MTA_NOTNE | P62339 from UniProtKB/Swiss-Prot  Length:60

    Alignment length:28
                                    11        21        
             MTA_NOTNE    2 DPCECSKSGTCNCGGSCTCTNCSCKSCK 29
               SCOP domains d1m0ja_ A: Metallothionein   SCOP domains
               CATH domains ---------------------------- CATH domains
               Pfam domains ---------------------------- Pfam domains
         Sec.struct. author ..hhhhhhh................... Sec.struct. author
                 SAPs(SNPs) ---------------------------- SAPs(SNPs)
                    PROSITE ----------METALLOTHIONEIN_VR PROSITE
                 Transcript ---------------------------- Transcript
                  1m0j A  8 DPCECSKSGTCNCGGSCTCTNCSCKSCK 35
                                    17        27
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Small proteins (3458)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 1M0J)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1M0J)

(-) Gene Ontology  (1, 1)

NMR Structure(hide GO term definitions)
Chain A   (MTA_NOTNE | P62339)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MTA_NOTNE | P62339: 1m0g

(-) Related Entries Specified in the PDB File

1m0g 1M0G CONTAINS ALPHA DOMAIN OF THE SAME PROTEIN