1LZL - JenaLib

Asym./Biol. Unit - manually (Jmol Viewer)

Asym./Biol. Unit (Jmol Viewer)

Title :   BACTERIAL HEROIN ESTERASE

Authors :   X. Zhu, N. A. Larsen, A. Basran, N. C. Bruce, I. A. Wilson

Date :   10 Jun 02 (Deposition) - 28 Jan 03 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.30

Chains :   Asym./Biol. Unit : A

Keywords :   Alpha/Beta Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   X. Zhu, N. A. Larsen, A. Basran, N. C. Bruce, I. A. Wilson
Observation Of An Arsenic Adduct In An Acetyl Esterase Crystal Structure
J. Biol. Chem. V. 278 2008 2003
PubMed-ID: 12421810 | Reference-DOI: 10.1074/JBC.M210103200
(for further references see the PDB file header)

Molecule 1 - HEROIN ESTERASE
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET28A(+)
	Expression System Strain	:	BL21-GOLD(DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Organism Scientific	:	RHODOCOCCUS SP.
	Organism Taxid	:	1831
	Strain	:	H1

		1
Asymmetric/Biological Unit	:	A

Summary Information (see also Sequences/Alignments below)

(no "Ligand,Modified Residues,Ions" information available for 1LZL)

(no "Site" information available for 1LZL)

(no "SS Bond" information available for 1LZL)

Asymmetric/Biological Unit

No.	Residues
1	Gly A:77	-	Pro A:78
2	Ala A:121	-	Pro A:122
3	Phe A:126	-	Pro A:127

(no "SAP(SNP)/Variant" information available for 1LZL)

(no "PROSITE Motif" information available for 1LZL)

(no "Exon" information available for 1LZL)

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:317
 aligned with O06441_RHOSO | O06441 from UniProtKB/TrEMBL  Length:322

    Alignment length:317
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       
         O06441_RHOSO     2 TTFPTLDPELAAALTMLPKVDFADLPNARATYDALIGAMLADLSFDGVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGESAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAGVRERGAAKPHCDPERVAFA 318
               SCOP domains d1lzla_ A: Heroin esterase                                                                                                                                                                                                                                                                                                    SCOP domains
               CATH domains 1lzlA00 A:2-318  [code=3.40.50.1820, no name defined]                                                                                                                                                                                                                                                                         CATH domains
               Pfam domains --------------------------------------------------------------------------------Abhydrolase_3-1lzlA01 A:82-294                                                                                                                                                                                       ------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhh.........hhhhhhhhhhhhhhhhhh......eeeeeeee........eeeeeeee......eeeeeee........hhhhhhhhhhhhhhhhh.eeeee..........hhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhh.....eeeee.........hhhhhhh......hhhhhhhhhhhhhh...............hhhhh........eeeeee....hhhhhhhhhhhhhhh...eeeeee.....hhhhh..hhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1lzl A   2 TTFPTLDPELAAALTMLPKVDFADLPNARATYDALIGAMLADLSFDGVSLRELSAPGLDGDPEVKIRFVTPDNTAGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELDDRLETVSMTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDLTGLPPTYLSTMELDPLRDEGIEYALRLLQAGVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRS 318
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric/Biological Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: Alpha and beta proteins (a/b) (23833)

Fold: alpha/beta-Hydrolases (971)

Superfamily: alpha/beta-Hydrolases (971)

Family: Carboxylesterase (24)

Protein domain: Heroin esterase (2)

Rhodococcus sp. [TaxId: 1831] (2)

d1lzla_

Asymmetric/Biological Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Alpha Beta (26913)

Architecture: 3-Layer(aba) Sandwich (12045)

Topology: Rossmann fold (7312)

Homologous Superfamily: [code=3.40.50.1820, no name defined] (692)

Rhodococcus sp.. Organism_taxid: 1831. Strain: h1. (2)

1lzlA00

A:2-318

Asymmetric/Biological Unit

Clans(

)

Families(

)

Organisms( (-)

)

Clan: AB_hydrolase (347)

Family: Abhydrolase_3 (15)

Rhodococcus sp (2)

Abhydrolase_3-1lzlA01

A:82-294

Asymmetric/Biological Unit(hide GO term definitions)

Chain A (O06441_RHOSO | O06441)

molecular function
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
biological process
	GO:0008152	metabolic process	The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.

Asymmetric/Biological Unit
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	Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 1lzl)

	Sites
(no "Sites" information available for 1lzl)

	Cis Peptide Bonds
		Ala A:121 - Pro A:122	[ RasMol ]
		Gly A:77 - Pro A:78	[ RasMol ]
		Phe A:126 - Pro A:127	[ RasMol ]

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	1lzl
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	O06441_RHOSO \| O06441	:	1lzk

1lzk	THE SAME PROTEIN

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (3, 3)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

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SCOP Domains (1, 1)

CATH Domains (1, 1)

Pfam Domains (1, 1)

Gene Ontology (2, 2)

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