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(-) Description

Title :  BETA-CRYPTOGEIN-CHOLESTEROL COMPLEX
 
Authors :  M. -B. Lascombe, M. Ponchet, P. Venard, M. -L. Milat, J. -P. Blein, T. Prange
Date :  15 May 02  (Deposition) - 29 May 02  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.45
Chains :  Asym./Biol. Unit :  A
Keywords :  Cryptogein, Cholesterol, Sterol Carrier Protein, Toxin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. B. Lascombe, M. Ponchet, P. Venard, M. L. Milat, J. P. Blein, T. Prange
The 1. 45 A Resolution Structure Of The Cryptogein-Cholesterol Complex: A Close-Up View Of A Sterol Carrier Protein (Scp) Active Site.
Acta Crystallogr. , Sect. D V. 58 1442 2002
PubMed-ID: 12198300  |  Reference-DOI: 10.1107/S0907444902011745
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BETA-ELICITIN CRYPTOGEIN
    Chains: A
    Organism Scientific: PHYTOPHTHORA CRYPTOGEA
    Organism Taxid: 4786
    Synonym: FUNGAL ELICITOR CRYPTOGEIN, CRY

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
2CLR1Ligand/IonCHOLESTEROL

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN A:83 , HOH A:111BINDING SITE FOR RESIDUE CL A 100
2AC2SOFTWARETYR A:33 , MET A:35 , TYR A:47 , PRO A:76 , HOH A:105BINDING SITE FOR RESIDUE CLR A 99

(-) SS Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1A:3 -A:71
2A:27 -A:56
3A:51 -A:95

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1LRI)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1LRI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1LRI)

(-) Exons   (0, 0)

(no "Exon" information available for 1LRI)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:98
 aligned with ELIB_PHYCR | P15570 from UniProtKB/Swiss-Prot  Length:118

    Alignment length:98
                                    30        40        50        60        70        80        90       100       110        
           ELIB_PHYCR    21 TACTATQQTAAYKTLVSILSDASFNQCSTDSGYSMLTAKALPTTAQYKLMCASTACNTMIKKIVTLNPPNCDLTVPTSGLVLNVYSYANGFSNKCSSL 118
               SCOP domains d1lria_ A: beta-cryptogein                                                                         SCOP domains
               CATH domains 1lriA00 A:1-98 Beta-cryptogein                                                                     CATH domains
               Pfam domains Elicitin-1lriA01 A:1-96                                                                         -- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhh......ee......eehhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------- Transcript
                 1lri A   1 TACTASQQTAAYKTLVSILSDASFNQCSTDSGYSMLTAKALPTTAQYKLMCASTACNTMIKKIVTLNPPNCDLTVPTSGLVLNVYSYANGFSNKCSSL  98
                                    10        20        30        40        50        60        70        80        90
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Clan: no clan defined [family: Elicitin] (2)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A   (ELIB_PHYCR | P15570)
biological process
    GO:0006952    defense response    Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
    GO:0034053    modulation by symbiont of host defense-related programmed cell death    Any process in which an organism modulates the frequency, rate or extent of defense-related programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.
    GO:0009405    pathogenesis    The set of specific processes that generate the ability of an organism to induce an abnormal, generally detrimental state in another organism.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

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  1lri
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  ELIB_PHYCR | P15570
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ELIB_PHYCR | P15570: 1beg 1beo 1bxm

(-) Related Entries Specified in the PDB File

1beo 1BEO IS NATIVE TETRAGONAL CRYPTOGEIN
1bxm 1BXM IS MUTANT CRYPTOGEIN COMPLEXED WITH ERGOSTEROL