Chain A from PDB Type:PROTEIN Length:391
aligned with Q50245_METMZ | Q50245 from UniProtKB/TrEMBL Length:491
Alignment length:391
52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432
Q50245_METMZ 43 STFAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPS 433
SCOP domains d1l0qa2 A:1-301 Surface layer protein d1l0qa1 A:302-391 Surface layer protein SCOP domains
CATH domains 1l0qA01 A:1-301 YVTN repeat-like/Quinoprotein amine dehydrogenase 1l0qA02 A:302-391 [code=2.60.40.670, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee....eeeeee....eeeeeee........ee.....eeeeeehhh.eeeeee.....eeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee...eeeeeee.....eeeeeee.....eeeeee.....eeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee....ee.....eee...........eee.....eee....eeeee......eeeee.....ee.....ee.....eeeeeeeeeee..eeeeeeeeeeee........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1l0q A 1 STFAYIANSESDNISVIDVTSNKVTATIPVGSNPmGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNmASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSmSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSmIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFcNTVSVIDTATNTITATmAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPS 391
10 20 30 | 40 50 60 70 80 90 | 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 | 270 280 | 290 300 310 320 330 340 350 360 370 380 390
35-MSE 93-MSE 180-MSE 228-MSE 265-YCM 282-MSE
Chain B from PDB Type:PROTEIN Length:391
aligned with Q50245_METMZ | Q50245 from UniProtKB/TrEMBL Length:491
Alignment length:391
52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432
Q50245_METMZ 43 STFAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPS 433
SCOP domains d1l0qb2 B:1-301 Surface layer protein d1l0qb1 B:302-391 Surface layer protein SCOP domains
CATH domains 1l0qB01 B:1-301 YVTN repeat-like/Quinoprotein amine dehydrogenase 1l0qB02 B:302-391 [code=2.60.40.670, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee....eeeeee....eeeeeee....eeeeee.....eeeeee....eeeeee.....eeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee...eeeeeee.....eeeeeee.....eeeeee.....eeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee....ee.....eee...........ee......eee....ee.ee......eeeee.....ee.....ee.....eeeeeeeeeee..eeeeeeeeeeee........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1l0q B 1 STFAYIANSESDNISVIDVTSNKVTATIPVGSNPmGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNmASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSmSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSmIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFcNTVSVIDTATNTITATmAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPS 391
10 20 30 | 40 50 60 70 80 90 | 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 | 270 280 | 290 300 310 320 330 340 350 360 370 380 390
35-MSE 93-MSE 180-MSE 228-MSE 265-YCM 282-MSE
Chain C from PDB Type:PROTEIN Length:391
aligned with Q50245_METMZ | Q50245 from UniProtKB/TrEMBL Length:491
Alignment length:391
52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432
Q50245_METMZ 43 STFAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPS 433
SCOP domains d1l0qc2 C:1-301 Surface layer protein d1l0qc1 C:302-391 Surface layer protein SCOP domains
CATH domains 1l0qC01 C:1-301 YVTN repeat-like/Quinoprotein amine dehydrogenase 1l0qC02 C:302-391 [code=2.60.40.670, no name defined] CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeeee....eeeeee....eeeeeee........ee.....eeeeee....eeeeee.....eeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee...eeeeeee.....eeeeeee.....eeeeee....eeeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee...........eee...........ee......eee....ee.ee......eeeee.....ee.....ee.....eeeeeeeeeee..eeeeeeeeeeee........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1l0q C 1 STFAYIANSESDNISVIDVTSNKVTATIPVGSNPmGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNmASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSmSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSmIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFcNTVSVIDTATNTITATmAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPS 391
10 20 30 | 40 50 60 70 80 90 | 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 | 270 280 | 290 300 310 320 330 340 350 360 370 380 390
35-MSE 93-MSE 180-MSE 228-MSE 265-YCM 282-MSE
Chain D from PDB Type:PROTEIN Length:391
aligned with Q50245_METMZ | Q50245 from UniProtKB/TrEMBL Length:491
Alignment length:391
52 62 72 82 92 102 112 122 132 142 152 162 172 182 192 202 212 222 232 242 252 262 272 282 292 302 312 322 332 342 352 362 372 382 392 402 412 422 432
Q50245_METMZ 43 STFAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPS 433
SCOP domains d1l0qd2 D:1-301 Surface layer protein d1l0qd1 D:302-391 Surface layer protein SCOP domains
CATH domains 1l0qD01 D:1-301 YVTN repeat-like/Quinoprotein amine dehydrogenase 1l0qD02 D:302-391 [code=2.60.40.670, no name defined] CATH domains
Pfam domains (1) ---------------------------------------------------------------------------------------------------Lactonase-1l0qD01 D:100-240 --------------------------------------------------------------------PKD-1l0qD09 D:309-376 --------------- Pfam domains (1)
Pfam domains (2) ---------------------------------------------------------------------------------------------------Lactonase-1l0qD02 D:100-240 --------------------------------------------------------------------PKD-1l0qD10 D:309-376 --------------- Pfam domains (2)
Pfam domains (3) ---------------------------------------------------------------------------------------------------Lactonase-1l0qD03 D:100-240 --------------------------------------------------------------------PKD-1l0qD11 D:309-376 --------------- Pfam domains (3)
Pfam domains (4) ---------------------------------------------------------------------------------------------------Lactonase-1l0qD04 D:100-240 --------------------------------------------------------------------PKD-1l0qD12 D:309-376 --------------- Pfam domains (4)
Pfam domains (5) ---------------------------------------------------------------------------------------------------Lactonase-1l0qD05 D:100-240 ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (5)
Pfam domains (6) ---------------------------------------------------------------------------------------------------Lactonase-1l0qD06 D:100-240 ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (6)
Pfam domains (7) ---------------------------------------------------------------------------------------------------Lactonase-1l0qD07 D:100-240 ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (7)
Pfam domains (8) ---------------------------------------------------------------------------------------------------Lactonase-1l0qD08 D:100-240 ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains (8)
Sec.struct. author .eeeeeee....eeeeee.....eeeeee........ee.....eeeeee....eeeeee.....eeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee...eeeeeee.....eeeeeee.....eeeeee....eeeeeee....eeeeee.....eeeeee....eeeeee....eeeeeee...........eee...........eee......ee....eeeee......eeeee.....ee.....ee.....eeeeeeeeee....eeeeeeeeeee........ Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1l0q D 1 STFAYIANSESDNISVIDVTSNKVTATIPVGSNPmGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNmASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSmSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSmIDTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFcNTVSVIDTATNTITATmAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSSSKKQNPTHTYSETGIYTVRLTVSNSNGTDSQISTVNVVLKGSPTPS 391
10 20 30 | 40 50 60 70 80 90 | 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240 250 260 | 270 280 | 290 300 310 320 330 340 350 360 370 380 390
35-MSE 93-MSE 180-MSE 228-MSE 265-YCM 282-MSE
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |