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(-) Description

Title :  STRUCTURE OF PSEUDOMONAS CELLULOSA ALPHA-D-GLUCURONIDASE COMPLEXED WITH GLUCURONIC ACID AND XYLOTRIOSE
 
Authors :  D. Nurizzo, T. Nagy, H. J. Gilbert, G. J. Davies
Date :  26 Nov 01  (Deposition) - 26 Sep 02  (Release) - 05 Jul 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.67
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Hydrolase, Glucuronidase, (Alpha-Beta)8 Barrel, Glycoside Hydrolase, Glucuronic Acid, Xylotriose (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  D. Nurizzo, T. Nagy, H. J. Gilbert, G. J. Davies
The Structural Basis For Catalysis And Specificity Of The Pseudomonas Cellulosa Alpha-Glucuronidase, Glca67A
Structure V. 10 547 2002
PubMed-ID: 11937059  |  Reference-DOI: 10.1016/S0969-2126(02)00742-6

(-) Compounds

Molecule 1 - ALPHA-D-GLUCURONIDASE
    ChainsA, B
    EC Number3.2.1.139
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System PlasmidPTN1
    Expression System StrainTUNER (DE3)
    Expression System Taxid562
    Organism ScientificCELLVIBRIO JAPONICUS
    Organism Taxid155077
    Other DetailsCIMB

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 25)

Asymmetric/Biological Unit (4, 25)
No.NameCountTypeFull Name
1BDP2Ligand/IonBETA-D-GLUCOPYRANURONIC ACID
2CO8Ligand/IonCOBALT (II) ION
3EDO11Ligand/Ion1,2-ETHANEDIOL
4XYP4Ligand/IonBETA-D-XYLOPYRANOSE

(-) Sites  (25, 25)

Asymmetric Unit (25, 25)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREARG A:169 , HIS A:528 , BDP A:1706 , XYP A:1713BINDING SITE FOR RESIDUE XYP A 1712
02AC2SOFTWAREGLU A:292 , PHE A:327 , TYR A:329 , ARG A:336 , ASP A:365 , HIS A:521 , GLN A:525 , HIS A:528 , TRP A:543 , BDP A:1706 , XYP A:1712BINDING SITE FOR RESIDUE XYP A 1713
03AC3SOFTWAREARG B:169 , HIS B:528 , BDP B:1705 , XYP B:1713BINDING SITE FOR RESIDUE XYP B 1712
04AC4SOFTWAREGLU B:292 , PHE B:327 , TYR B:329 , ARG B:336 , ASP B:365 , HIS B:521 , GLN B:525 , HIS B:528 , TRP B:543 , BDP B:1705 , XYP B:1712BINDING SITE FOR RESIDUE XYP B 1713
05AC5SOFTWARETRP A:160 , GLU A:168 , ARG A:169 , ASN A:211 , LYS A:288 , ARG A:325 , PHE A:327 , LYS A:360 , ASP A:365 , GLU A:393 , XYP A:1712 , XYP A:1713 , HOH A:2698BINDING SITE FOR RESIDUE BDP A 1706
06AC6SOFTWARETRP B:160 , GLU B:168 , ARG B:169 , ASN B:211 , LYS B:288 , ARG B:325 , PHE B:327 , LYS B:360 , ASP B:365 , GLU B:393 , XYP B:1712 , XYP B:1713 , HOH B:2707BINDING SITE FOR RESIDUE BDP B 1705
07AC7SOFTWAREALA A:625 , THR A:629BINDING SITE FOR RESIDUE CO A 1714
08AC8SOFTWAREGLY A:7 , ASN A:452 , PRO A:457 , HOH A:2489 , HOH A:2652BINDING SITE FOR RESIDUE CO A 1715
09AC9SOFTWAREASN A:607 , TRP A:609 , ARG A:673BINDING SITE FOR RESIDUE CO A 1716
10BC1SOFTWAREASN A:162 , ASN A:164BINDING SITE FOR RESIDUE CO A 1717
11BC2SOFTWARETHR B:629 , HOH B:2621BINDING SITE FOR RESIDUE CO B 1714
12BC3SOFTWAREGLY B:7 , ASN B:452 , PRO B:457 , GLN B:460 , ARG B:641 , HOH B:2481 , HOH B:2654BINDING SITE FOR RESIDUE CO B 1715
13BC4SOFTWAREASN B:162 , ASN B:164 , HOH B:2715BINDING SITE FOR RESIDUE CO B 1716
14BC5SOFTWAREASN B:607 , TRP B:609 , ARG B:673BINDING SITE FOR RESIDUE CO B 1717
15BC6SOFTWARETYR A:101 , HIS A:130 , ARG A:133 , SER A:199 , LEU A:200 , TRP A:471 , HOH A:2699BINDING SITE FOR RESIDUE EDO A 1707
16BC7SOFTWAREARG A:51 , PRO A:188 , ASP A:192 , HOH A:2247 , HOH A:2700 , HOH A:2701BINDING SITE FOR RESIDUE EDO A 1708
17BC8SOFTWAREHIS A:130 , ARG A:133 , SER A:148 , ARG A:468 , TRP A:471 , ILE A:475 , HOH A:2492BINDING SITE FOR RESIDUE EDO A 1709
18BC9SOFTWARETYR A:8 , ASP A:9 , LEU A:12 , ASP A:192 , ARG A:195 , ILE A:196 , HOH A:2020 , HOH A:2702BINDING SITE FOR RESIDUE EDO A 1710
19CC1SOFTWAREASP A:631 , LYS A:646 , GLN A:650 , HOH A:2703BINDING SITE FOR RESIDUE EDO A 1711
20CC2SOFTWARETYR B:101 , HIS B:130 , ARG B:133 , SER B:199 , LEU B:200 , TRP B:471 , HOH B:2708BINDING SITE FOR RESIDUE EDO B 1706
21CC3SOFTWAREARG B:51 , ASP B:192 , HOH B:2248 , HOH B:2709BINDING SITE FOR RESIDUE EDO B 1707
22CC4SOFTWAREASN B:559 , THR B:561 , HIS B:594 , HIS B:595 , HOH B:2710 , HOH B:2711BINDING SITE FOR RESIDUE EDO B 1708
23CC5SOFTWARETYR B:8 , ASP B:9 , LEU B:12 , ASP B:192 , ARG B:195 , ILE B:196 , HOH B:2020 , HOH B:2712BINDING SITE FOR RESIDUE EDO B 1709
24CC6SOFTWAREGLY A:349 , LYS A:350 , PHE A:351 , GLY B:420 , GLU B:421 , HOH B:2713BINDING SITE FOR RESIDUE EDO B 1710
25CC7SOFTWAREHIS B:130 , ARG B:133 , SER B:148 , ARG B:468 , TRP B:471 , ILE B:475 , HOH B:2484BINDING SITE FOR RESIDUE EDO B 1711

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1GQL)

(-) Cis Peptide Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1Leu A:182 -Pro A:183
2Gln A:525 -Gly A:526
3Leu B:182 -Pro B:183
4Gln B:525 -Gly B:526

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1GQL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1GQL)

(-) Exons   (0, 0)

(no "Exon" information available for 1GQL)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:701
 aligned with AGUA_CELJU | B3PC73 from UniProtKB/Swiss-Prot  Length:732

    Alignment length:701
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724 
           AGUA_CELJU    25 EDGYDMWLRYQPIADQTLLKTYQKQIRHLHVAGDSPTINAAAAELQRGLSGLLNKPIVARDEKLKDYSLVIGTPDNSPLIASLNLGERLQALGAEGYLLEQTRINKRHVVIVAANSDVGVLYGSFHLLRLIQTQHALEKLSLSSAPRLQHRVVNHWDNLNRVVERGYAGLSLWDWGSLPNYLAPRYTDYARINASLGINGTVINNVNADPRVLSDQFLQKIAALADAFRPYGIKMYLSINFNSPRAFGDVDTADPLDPRVQQWWKTRAQKIYSYIPDFGGFLVKADSEGQPGPQGYGRDHAEGANMLAAALKPFGGVVFWRAFVYHPDIEDRFRGAYDEFMPLDGKFADNVILQIKNGPIDFQPREPFSALFAGMSRTNMMMEFQITQEYFGFATHLAYQGPLFEESLKTETHARGEGSTIGNILEGKVFKTRHTGMAGVINPGTDRNWTGHPFVQSSWYAFGRMAWDHQISAATAADEWLRMTFSNQPAFIEPVKQMMLVSREAGVNYRSPLGLTHLYSQGDHYGPAPWTDDLPRADWTAVYYHRASKTGIGFNRTKTGSNALAQYPEPIAKAWGDLNSVPEDLILWFHHLSWDHRMQSGRNLWQELVHKYYQGVEQVRAMQRTWDQQEAYVDAARFAQVKALLQVQEREAVRWRNSCVLYFQSVAGRPIPANYEQPEHDLEYYKMLARTTYVPEPWHPA 725
               SCOP domains d1gqla2 A:5-151 alpha-D-glucuronidase, N-terminal domain                                                                                           d1gqla1 A:152-705 alpha-D-glucuronidase catalytic domain                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   SCOP domains
               CATH domains 1gqlA01 A:5-150 Chitobiase, domain 2                                                                                                              1gqlA02 A:151-474 Glycosidases                                                                                                                                                                                                                                                                                                      1gqlA03 A:475-705 Alpha-d-glucuronidase, C-terminal Domain                                                                                                                                                                              CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhh.eeee...hhhhhhhhhhhhhhhhhhhh....ee.......eeeee....hhhhhhh..hhhhhh.....eeeeeeee..eeeeeeee.hhhhhhhhhhhhhhhhhh.......eeee.....eeeee...................hhhhh....hhhhhhhhhhhhh....eee......hhhhhhhhhhhhhhhhhhhhhhhh.eeeeee..hhhhhh.........hhhhhhhhhhhhhhhhhhh....eeee........hhhhhh.hhhhhhhhhhhhhhhhh.eeeee.........hhhhhhhhhhhhhh......eeeeee.............hhhhhh....eeeeee..............hhhhhhhhhh..........hhhhhhh.........eeeee.............hhhhhhhhhhhhhhh...hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh..........................hhhhhhhhhhh....ee.........hhhhhhhhhhhhhhhh....hhhhhhhh..ee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gql A   5 EDGYDMWLRYQPIADQTLLKTYQKQIRHLHVAGDSPTINAAAAELQRGLSGLLNKPIVARDEKLKDYSLVIGTPDNSPLIASLNLGERLQALGAEGYLLEQTRINKRHVVIVAANSDVGVLYGSFHLLRLIQTQHALEKLSLSSAPRLQHRVVNHWDNLNRVVERGYAGLSLWDWGSLPNYLAPRYTDYARINASLGINGTVINNVNADPRVLSDQFLQKIAALADAFRPYGIKMYLSINFNSPRAFGDVDTADPLDPRVQQWWKTRAQKIYSYIPDFGGFLVKADSEGQPGPQGYGRDHAEGANMLAAALKPFGGVVFWRAFVYHPDIEDRFRGAYDEFMPLDGKFADNVILQIKNGPIDFQPREPFSALFAGMSRTNMMMEFQITQEYFGFATHLAYQGPLFEESLKTETHARGEGSTIGNILEGKVFKTRHTGMAGVINPGTDRNWTGHPFVQSSWYAFGRMAWDHQISAATAADEWLRMTFSNQPAFIEPVKQMMLVSREAGVNYRSPLGLTHLYSQGDHYGPAPWTDDLPRADWTAVYYHRASKTGIGFNRTKTGSNALAQYPEPIAKAWGDLNSVPEDLILWFHHLSWDHRMQSGRNLWQELVHKYYQGVEQVRAMQRTWDQQEAYVDAARFAQVKALLQVQEREAVRWRNSCVLYFQSVAGRPIPANYEQPEHDLEYYKMLARTTYVPEPWHPA 705
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704 

Chain B from PDB  Type:PROTEIN  Length:700
 aligned with AGUA_CELJU | B3PC73 from UniProtKB/Swiss-Prot  Length:732

    Alignment length:700
                                    34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724
           AGUA_CELJU    25 EDGYDMWLRYQPIADQTLLKTYQKQIRHLHVAGDSPTINAAAAELQRGLSGLLNKPIVARDEKLKDYSLVIGTPDNSPLIASLNLGERLQALGAEGYLLEQTRINKRHVVIVAANSDVGVLYGSFHLLRLIQTQHALEKLSLSSAPRLQHRVVNHWDNLNRVVERGYAGLSLWDWGSLPNYLAPRYTDYARINASLGINGTVINNVNADPRVLSDQFLQKIAALADAFRPYGIKMYLSINFNSPRAFGDVDTADPLDPRVQQWWKTRAQKIYSYIPDFGGFLVKADSEGQPGPQGYGRDHAEGANMLAAALKPFGGVVFWRAFVYHPDIEDRFRGAYDEFMPLDGKFADNVILQIKNGPIDFQPREPFSALFAGMSRTNMMMEFQITQEYFGFATHLAYQGPLFEESLKTETHARGEGSTIGNILEGKVFKTRHTGMAGVINPGTDRNWTGHPFVQSSWYAFGRMAWDHQISAATAADEWLRMTFSNQPAFIEPVKQMMLVSREAGVNYRSPLGLTHLYSQGDHYGPAPWTDDLPRADWTAVYYHRASKTGIGFNRTKTGSNALAQYPEPIAKAWGDLNSVPEDLILWFHHLSWDHRMQSGRNLWQELVHKYYQGVEQVRAMQRTWDQQEAYVDAARFAQVKALLQVQEREAVRWRNSCVLYFQSVAGRPIPANYEQPEHDLEYYKMLARTTYVPEPWHP 724
               SCOP domains d1gqlb2 B:5-151 alpha-D-glucuronidase, N-terminal domain                                                                                           d1gqlb1 B:152-704 alpha-D-glucuronidase catalytic domain                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  SCOP domains
               CATH domains -------------1gqlB01 B:18-148 Chitobiase, domain 2                                                                                              ----1gqlB02 B:153-472 Glycosidases                                                                                                                                                                                                                                                                                                  ---1gqlB03 B:476-704 Alpha-d-glucuronidase, C-terminal Domain                                                                                                                                                                            CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhhhhhhhh.eeee...hhhhhhhhhhhhhhhhhhhh....ee.......eeeee....hhhhhhh..hhhhhh.....eeeeeeee..eeeeeeee.hhhhhhhhhhhhhhhhhh.......eeee.....eeeee...................hhhhh....hhhhhhhhhhhhh....eee......hhhhhhhhhhhhhhhhhhhhhhhh.eeeeee..hhhhhh.........hhhhhhhhhhhhhhhhhhh....eeee........hhhhhh.hhhhhhhhhhhhhhhhh.eeeee.........hhhhhhhhhhhhhh......eeeeee.............hhhhhh....eeeeee..............hhhhhhhhhh..........hhhhhhh.........eeeee.............hhhhhhhhhhhhhhh...hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh..........................hhhhhhhhhhh....ee.........hhhhhhhhhhhhhhhh....hhhhhhhh..ee.........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 1gql B   5 EDGYDMWLRYQPIADQTLLKTYQKQIRHLHVAGDSPTINAAAAELQRGLSGLLNKPIVARDEKLKDYSLVIGTPDNSPLIASLNLGERLQALGAEGYLLEQTRINKRHVVIVAANSDVGVLYGSFHLLRLIQTQHALEKLSLSSAPRLQHRVVNHWDNLNRVVERGYAGLSLWDWGSLPNYLAPRYTDYARINASLGINGTVINNVNADPRVLSDQFLQKIAALADAFRPYGIKMYLSINFNSPRAFGDVDTADPLDPRVQQWWKTRAQKIYSYIPDFGGFLVKADSEGQPGPQGYGRDHAEGANMLAAALKPFGGVVFWRAFVYHPDIEDRFRGAYDEFMPLDGKFADNVILQIKNGPIDFQPREPFSALFAGMSRTNMMMEFQITQEYFGFATHLAYQGPLFEESLKTETHARGEGSTIGNILEGKVFKTRHTGMAGVINPGTDRNWTGHPFVQSSWYAFGRMAWDHQISAATAADEWLRMTFSNQPAFIEPVKQMMLVSREAGVNYRSPLGLTHLYSQGDHYGPAPWTDDLPRADWTAVYYHRASKTGIGFNRTKTGSNALAQYPEPIAKAWGDLNSVPEDLILWFHHLSWDHRMQSGRNLWQELVHKYYQGVEQVRAMQRTWDQQEAYVDAARFAQVKALLQVQEREAVRWRNSCVLYFQSVAGRPIPANYEQPEHDLEYYKMLARTTYVPEPWHP 704
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 4)

Asymmetric/Biological Unit

(-) CATH Domains  (3, 6)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1GQL)

(-) Gene Ontology  (12, 12)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B   (AGUA_CELJU | B3PC73)
molecular function
    GO:0046559    alpha-glucuronidase activity    Catalysis of the reaction: an alpha-D-glucuronoside + H2O = an alcohol + D-glucuronate.
    GO:0016787    hydrolase activity    Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
    GO:0016798    hydrolase activity, acting on glycosyl bonds    Catalysis of the hydrolysis of any glycosyl bond.
    GO:0033939    xylan alpha-1,2-glucuronosidase activity    Catalysis of the hydrolysis of alpha-D-(1->2)-(4-O-methyl)glucuronosyl links in the main chain of hardwood xylans.
biological process
    GO:0005975    carbohydrate metabolic process    The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
    GO:2000886    glucuronoxylan catabolic process    The chemical reactions and pathways resulting in the breakdown of a glucuronoxylan.
    GO:0008152    metabolic process    The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
    GO:0000272    polysaccharide catabolic process    The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
    GO:0045493    xylan catabolic process    The chemical reactions and pathways resulting in the breakdown of xylan, a polymer containing a beta-1,4-linked D-xylose backbone.
cellular component
    GO:0009279    cell outer membrane    A lipid bilayer that forms the outermost membrane of the cell envelope; enriched in polysaccharide and protein; the outer leaflet of the membrane contains specific lipopolysaccharide structures.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.

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  AGUA_CELJU | B3PC73
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        AGUA_CELJU | B3PC731gqi 1gqj 1gqk 1h41

(-) Related Entries Specified in the PDB File

1gqi PSEUDOMONAS CELLULOSA ALPHA-D-GLUCURONIDASE.
1gqj PSEUDOMONAS CELLULOSA ALPHA-D-GLUCURONIDASE. COMPLEXED WITH XYLOBIOSE
1gqk PSEUDOMONAS CELLULOSA ALPHA-D-GLUCURONIDASE. COMPLEXED WITH GLUCURONIC ACID