1F1T | UR0011 - JenaLib

Title :   CRYSTAL STRUCTURE OF THE MALACHITE GREEN APTAMER COMPLEXED WITH TETRAMETHYL-ROSAMINE

Authors :   C. Baugh, D. Grate, C. Wilson

Date :   19 May 00 (Deposition) - 04 Sep 00 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.80

Chains :   Asym./Biol. Unit : A

Keywords :   U-Turn, Base Quadruple, Base Triple, Gnra Tetraloop, 5- Bromo-Uridine, Rna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. Baugh, D. Grate, C. Wilson
2. 8 A Crystal Structure Of The Malachite Green Aptamer.
J. Mol. Biol. V. 301 117 2000
PubMed-ID: 10926496 | Reference-DOI: 10.1006/JMBI.2000.3951
(for further references see the PDB file header)

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 14)

Sites (4, 4)

Asymmetric Unit (4, 4)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	A A:16 , 5BU A:32 , G A:34	BINDING SITE FOR RESIDUE SR A 201
2	AC2	SOFTWARE	A A:31 , G A:33	BINDING SITE FOR RESIDUE SR A 205
3	AC3	SOFTWARE	G A:33 , HOH A:304	BINDING SITE FOR RESIDUE SR A 206
4	AC4	SOFTWARE	C A:7 , G A:8 , G A:24 , C A:28 , G A:29 , A A:30	BINDING SITE FOR RESIDUE ROS A 101

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Chain A from PDB  Type:RNA  Length:38
                                                                     
                  1f1t A  1 GGAuCCCGACuGGCGAGAGCCAGGuAACGAAuGGAuCC 38
                               |    10|       20    |   30 |   |  
                               |     11-5BU        25-5BU 32-5BU  
                               4-5BU                          36-5BU

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SCOP Domains (0, 0)

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Gene Ontology (0, 0)

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