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(-) Description

Title :  NMR ENSEMBLE OF METHANOBACTERIUM THERMOAUTOTROPHICUM PROTEIN 1615
 
Authors :  D. Christendat, V. Booth, M. Gernstein, C. H. Arrowsmith, A. M. Edwards, Northeast Structural Genomics Consortium (Nesg)
Date :  25 Feb 00  (Deposition) - 03 Nov 00  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (10x)
Keywords :  Beta-Helix, Structural Genomics, Psi, Protein Structure Initiative, Northeast Structural Genomics Consortium, Nesg, Dna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Christendat, A. Yee, A. Dharamsi, Y. Kluger, A. Savchenko, J. R. Cort, V. Booth, C. D. Mackereth, V. Saridakis, I. Ekiel, G. Kozlov, K. L. Maxwell, N. Wu, L. P. Mcintosh, K. Gehring, M. A. Kennedy, A. R. Davidson, E. F. Pai, M. Gerstein, A. M. Edwards, C. H. Arrowsmith
Structural Proteomics Of An Archaeon.
Nat. Struct. Biol. V. 7 903 2000
PubMed-ID: 11017201  |  Reference-DOI: 10.1038/82823
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - HYPOTHETICAL PROTEIN MTH1615
    Chains: A
    Organism Scientific: METHANOTHERMOBACTER THERMAUTOTROPHICUS
    Organism Taxid: 145262
    Other Details: HOMOLOGOUS TO HUMAN APOPTOSIS PROTEIN TFAR19

 Structural Features

(-) Chains, Units

  
NMR Structure (10x): 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1EIJ)

(-) Sites  (0, 0)

(no "Site" information available for 1EIJ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1EIJ)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1EIJ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 1EIJ)

(-) Exons   (0, 0)

(no "Exon" information available for 1EIJ)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:72
 aligned with DNBP_METTH | O27652 from UniProtKB/Swiss-Prot  Length:111

    Alignment length:72
                                    41        51        61        71        81        91       101  
           DNBP_METTH    32 MRQQLEMQKKQIMMQILTPEARSRLANLRLTRPDFVEQIELQLIQLAQMGRVRSKITDEQLKELLKRVAGKK 103
               SCOP domains d1eija_ A: Hypothetical protein MTH1615                                  SCOP domains
               CATH domains 1eijA00 A:1-72                                                           CATH domains
               Pfam domains ------------------------------------------------------------------------ Pfam domains
     Sec.struct. author (1) ........hhhhhh.--hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.....--hhhhhhhhhhhhh... Sec.struct. author (1)
     Sec.struct. author (2) ---------------eee------------------------------------eee--------------- Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------ Transcript
                 1eij A   1 MRQQLEMQKKQIMMQILTPEARSRLANLRLTRPDFVEQIELQLIQLAQMGRVRSKITDEQLKELLKRVAGKK  72
                                    10        20        30        40        50        60        70
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: All alpha proteins (14657)

(-) CATH Domains  (1, 1)

NMR Structure
(-)
Class: Mainly Alpha (13335)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1EIJ)

(-) Gene Ontology  (1, 1)

NMR Structure(hide GO term definitions)
Chain A   (DNBP_METTH | O27652)
molecular function
    GO:0003677    DNA binding    Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).

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 Related Entries

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(-) Related Entries Specified in the PDB File

tt10