Chain A from PDB Type:PROTEIN Length:158
aligned with CAPSD_TMV | P69687 from UniProtKB/Swiss-Prot Length:159
Alignment length:158
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
CAPSD_TMV 2 SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT 159
SCOP domains d1ei7a_ A: Tobacco mosaic virus coat protein SCOP domains
CATH domains 1ei7A00 A:1-158 [code=1.20.120.70, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee..hhhhhhh....eehhhhhhhhhhhhh.....hhhhhhhhhhhhhhh................eee....hhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eehhhhhhhhhh.ee...... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ei7 A 1 SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT 158
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain A from PDB Type:PROTEIN Length:158
aligned with CAPSD_TMVB | P69688 from UniProtKB/Swiss-Prot Length:159
Alignment length:158
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
CAPSD_TMVB 2 SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT 159
SCOP domains d1ei7a_ A: Tobacco mosaic virus coat protein SCOP domains
CATH domains 1ei7A00 A:1-158 [code=1.20.120.70, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee..hhhhhhh....eehhhhhhhhhhhhh.....hhhhhhhhhhhhhhh................eee....hhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eehhhhhhhhhh.ee...... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ei7 A 1 SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT 158
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain A from PDB Type:PROTEIN Length:158
aligned with CAPSD_TMVKR | P69689 from UniProtKB/Swiss-Prot Length:159
Alignment length:158
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
CAPSD_TMVKR 2 SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT 159
SCOP domains d1ei7a_ A: Tobacco mosaic virus coat protein SCOP domains
CATH domains 1ei7A00 A:1-158 [code=1.20.120.70, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee..hhhhhhh....eehhhhhhhhhhhhh.....hhhhhhhhhhhhhhh................eee....hhhhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eehhhhhhhhhh.ee...... Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ei7 A 1 SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT 158
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150
Chain B from PDB Type:PROTEIN Length:158
aligned with CAPSD_TMV | P69687 from UniProtKB/Swiss-Prot Length:159
Alignment length:158
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
CAPSD_TMV 2 SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT 159
SCOP domains d1ei7b_ B: Tobacco mosaic virus coat protein SCOP domains
CATH domains 1ei7B00 B:201-358 [code=1.20.120.70, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee..hhhhhhhhh..eehhhhhhhhhhhhh.....hhhhhhhhhhhhhhh................eee....hhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eehhhhhhhhhh.ee...... Sec.struct. author
SAPs(SNPs) ---------------------------I-------------------------------------------------S----------------D-------M---------------------------------R----------Y---------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ei7 B 201 SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT 358
210 220 230 240 250 260 270 280 290 300 310 320 330 340 350
Chain B from PDB Type:PROTEIN Length:158
aligned with CAPSD_TMVB | P69688 from UniProtKB/Swiss-Prot Length:159
Alignment length:158
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
CAPSD_TMVB 2 SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT 159
SCOP domains d1ei7b_ B: Tobacco mosaic virus coat protein SCOP domains
CATH domains 1ei7B00 B:201-358 [code=1.20.120.70, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee..hhhhhhhhh..eehhhhhhhhhhhhh.....hhhhhhhhhhhhhhh................eee....hhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eehhhhhhhhhh.ee...... Sec.struct. author
SAPs(SNPs) ---------------------------I-------------------------------------------------S----------------D-------M---------------------------------R----------Y---------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ei7 B 201 SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT 358
210 220 230 240 250 260 270 280 290 300 310 320 330 340 350
Chain B from PDB Type:PROTEIN Length:158
aligned with CAPSD_TMVKR | P69689 from UniProtKB/Swiss-Prot Length:159
Alignment length:158
11 21 31 41 51 61 71 81 91 101 111 121 131 141 151
CAPSD_TMVKR 2 SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT 159
SCOP domains d1ei7b_ B: Tobacco mosaic virus coat protein SCOP domains
CATH domains 1ei7B00 B:201-358 [code=1.20.120.70, no name defined] CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .ee..hhhhhhhhh..eehhhhhhhhhhhhh.....hhhhhhhhhhhhhhh................eee....hhhhhhhhhhhhhh...................hhhhhhhhhhhhhhhhhhhhhhhhhhhh..eehhhhhhhhhh.ee...... Sec.struct. author
SAPs(SNPs) ---------------------------I-------------------------------------------------S----------------D-------M---------------------------------R----------Y---------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1ei7 B 201 SYSITTPSQFVFLSSAWADPIELINLCTNALGNQFQTQQARTVVQRQFSEVWKPSPQVTVRFPDSDFKVYRYNAVLDPLVTALLGAFDTRNRIIEVENQANPTTAETLDATRRVDDATVAIRSAINNLIVELIRGTGSYNRSSFESSSGLVWTSGPAT 358
210 220 230 240 250 260 270 280 290 300 310 320 330 340 350
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |