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(-)NMR Structure - model 1
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(-) Description

Authors :  P. J. A. Erbel, Y. Karimi-Nejad, T. De Beer, R. Boelens, J. P. Kamerling, J. F. G. Vliegenthart
Date :  18 Feb 00  (Deposition) - 29 Feb 00  (Release) - 24 Feb 09  (Revision)
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (27x)
Keywords :  Glycoprotein, Chorionic Gonadotropin, Chorionic Gonadotropin Free A Subunit, Glycoprotein Structure, Cystine Knot, Nmr, Xplor (Keyword Search: [Gene Ontology, PubMed, Web (Google))
Reference :  P. J. A. Erbel, Y. Karimi-Nejad, T. De Beer, R. Boelens, J. P. Kamerling, J. F. G. Vliegenthart
Solution Structure Of The A-Subunit Of Human Chorionic Gonadotropin
Eur. J. Biochem. V. 260 490 1999
PubMed-ID: 10095786  |  Reference-DOI: 10.1046/J.1432-1327.1999.00188.X

(-) Compounds

    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606

 Structural Features

(-) Chains, Units

NMR Structure (27x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1DZ7)

(-) Sites  (0, 0)

(no "Site" information available for 1DZ7)

(-) SS Bonds  (5, 5)

NMR Structure
1A:7 -A:31
2A:10 -A:60
3A:28 -A:82
4A:32 -A:84
5A:59 -A:87

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1DZ7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1DZ7)

(-) PROSITE Motifs  (3, 3)

NMR Structure (3, 3)
1GLYCO_HORMONE_ALPHA_3PS50277 Glycoprotein hormones alpha chain family profile.GLHA_HUMAN31-116  1A:7-92
2GLYCO_HORMONE_ALPHA_1PS00779 Glycoprotein hormones alpha chain signature 1.GLHA_HUMAN52-64  1A:28-40
3GLYCO_HORMONE_ALPHA_2PS00780 Glycoprotein hormones alpha chain signature 2.GLHA_HUMAN102-115  1A:78-91

(-) Exons   (3, 3)

NMR Structure (3, 3)
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:92
 aligned with GLHA_HUMAN | P01215 from UniProtKB/Swiss-Prot  Length:116

    Alignment length:92
                                    34        44        54        64        74        84        94       104       114  
               SCOP domains d1dz7a_ A: Glycoprotein hormones alpha chain (Gonadotropin A, Follitropin alpha)             SCOP domains
               CATH domains 1dz7A00 A:1-92 Cystine-knot cytokines                                                        CATH domains
               Pfam domains -------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............................................................................................ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ------GLYCO_HORMONE_ALPHA_3  PDB: A:7-92 UniProt: 31-116                                     PROSITE (1)
                PROSITE (2) ---------------------------GLYCO_HORMONE-------------------------------------GLYCO_HORMONE_- PROSITE (2)
           Transcript 1 (1) 1.2   -------------------------------------------------------------Exon 1.4  PDB: A:68-92    Transcript 1 (1)
           Transcript 1 (2) -----Exon 1.3  PDB: A:6-67 UniProt: 30-91                          ------------------------- Transcript 1 (2)
                                    10        20        30        40        50        60        70        80        90  

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure

(-) CATH Domains  (1, 1)

NMR Structure
Class: Mainly Beta (13760)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 1DZ7)

(-) Gene Ontology  (10, 10)

NMR Structure(hide GO term definitions)
Chain A   (GLHA_HUMAN | P01215)
molecular function
    GO:0005179    hormone activity    The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects; all bind receptors and trigger some biological process.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
biological process
    GO:0007267    cell-cell signaling    Any process that mediates the transfer of information from one cell to another. This process includes signal transduction in the receiving cell and, where applicable, release of a ligand and any processes that actively facilitate its transport and presentation to the receiving cell. Examples include signaling via soluble ligands, via cell adhesion molecules and via gap junctions.
    GO:0016486    peptide hormone processing    The generation of a mature peptide hormone by posttranslational processing of a prohormone.
    GO:0030335    positive regulation of cell migration    Any process that activates or increases the frequency, rate or extent of cell migration.
    GO:0008284    positive regulation of cell proliferation    Any process that activates or increases the rate or extent of cell proliferation.
    GO:0045944    positive regulation of transcription from RNA polymerase II promoter    Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter.
    GO:0007165    signal transduction    The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
cellular component
    GO:0005796    Golgi lumen    The volume enclosed by the membranes of any cisterna or subcompartment of the Golgi apparatus, including the cis- and trans-Golgi networks.
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.


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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

        GLHA_HUMAN | P012151e9j 1fl7 1hcn 1hd4 1hrp 1qfw 1xul 1xwd 4ay9 4mqw

(-) Related Entries Specified in the PDB File

1hcn 1hrp 1xul