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(-) Description

Title :  SOLUTION NMR STRUCTURE OF THE IMMUNODOMINANT REGION OF PROTEIN G OF BOVINE RESPIRATORY SYNCYTIAL VIRUS, 48 STRUCTURES
 
Authors :  J. F. Doreleijers, J. P. M. Langedijk, K. Hard, J. A. C. Rullmann, R. Boelens, W. M. Schaaper, J. T. Van Oirschot, R. Kaptein
Date :  29 Mar 96  (Deposition) - 05 Jun 97  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (48x)
Keywords :  Attachment Protein G Of Bovine Respiratory Syncytial Virus, Immunoglobulin-Binding Protein, Transmembrane, Glycoprotein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  J. F. Doreleijers, J. P. Langedijk, K. Hard, R. Boelens, J. A. Rullmann, W. M. Schaaper, J. T. Van Oirschot, R. Kaptein
Solution Structure Of The Immunodominant Region Of Protein G Of Bovine Respiratory Syncytial Virus.
Biochemistry V. 35 14684 1996
PubMed-ID: 8942628  |  Reference-DOI: 10.1021/BI9621627
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PROTEIN G
    ChainsA
    EngineeredYES
    FragmentIMMUNODOMINANT REGION, RESIDUES 158 - 189
    Organism ScientificBOVINE RESPIRATORY SYNCYTIAL VIRUS (STRAIN 391-2)
    Organism Taxid31611
    Strain391-2
    SynonymBRSV-G REGION

 Structural Features

(-) Chains, Units

  
NMR Structure (48x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Sites  (0, 0)

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(-) SS Bonds  (2, 2)

NMR Structure
No.Residues
1A:173 -A:186
2A:176 -A:182

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:19
 aligned with GLYC_BRSVC | P22261 from UniProtKB/Swiss-Prot  Length:257

    Alignment length:19
                                   180         
           GLYC_BRSVC   171 VPCSTCEGNLACLSLCHIE 189
               SCOP domains d1brva_ A:          SCOP domains
               CATH domains ------------------- CATH domains
               Pfam domains ------------------- Pfam domains
         Sec.struct. author ..hhhh...hhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------- SAPs(SNPs)
                    PROSITE ------------------- PROSITE
                 Transcript ------------------- Transcript
                 1brv A 171 VPCSTCEGNLACLSLCHIE 189
                                   180         

   Legend:   → Mismatch (orange background)
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

NMR Structure
(-)
Class: Peptides (792)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (10, 10)

NMR Structure(hide GO term definitions)
Chain A   (GLYC_BRSVC | P22261)
biological process
    GO:0030683    evasion or tolerance by virus of host immune response    Any process, either active or passive, by which a virus avoids the effects of the host organism's immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.
    GO:0046718    viral entry into host cell    The process that occurs after viral attachment by which a virus, or viral nucleic acid, breaches the plasma membrane or cell envelope and enters the host cell. The process ends when the viral nucleic acid is released into the host cell cytoplasm.
    GO:0016032    viral process    A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
    GO:0019062    virion attachment to host cell    The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.
cellular component
    GO:0005576    extracellular region    The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.
    GO:0044228    host cell surface    The external part of the host cell wall and/or host plasma membrane.
    GO:0016021    integral component of membrane    The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0019012    virion    The complete fully infectious extracellular virus particle.
    GO:0055036    virion membrane    The lipid bilayer surrounding a virion.

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