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(-)Asym./Biol. Unit
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(-) Description

Title :  CRYSTAL STRUCTURE OF FKBP52 C-TERMINAL DOMAIN COMPLEX WITH THE C-TERMINAL PEPTIDE MEEVD OF HSP90
 
Authors :  B. Wu, P. Li, Z. Lou, Y. Liu, Y. Ding, C. Shu, B. Shen, Z. Rao
Date :  15 Sep 03  (Deposition) - 22 Jun 04  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym./Biol. Unit :  A,B,C,G,H
Keywords :  Isomerase, Rotamase, Chaperone, Heat Shock, Isomerase/Chaperone Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  B. Wu, P. Li, Y. Liu, Z. Lou, Y. Ding, C. Shu, S. Ye, M. Bartlam, B. Shen, Z. Rao
3D Structure Of Human Fk506-Binding Protein 52: Implications For The Assembly Of The Glucocorticoid Receptor/Hsp90/Immunophilin Heterocomplex.
Proc. Natl. Acad. Sci. Usa V. 101 8348 2004
PubMed-ID: 15159550  |  Reference-DOI: 10.1073/PNAS.0305969101
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - FK506-BINDING PROTEIN 4
    ChainsA, B, C
    EC Number5.2.1.8
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentFKBP52 C-TERMINAL DOMAIN
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymFKBP52 PROTEIN, 52 KDA FK506 BINDING PROTEIN, FKBP59
 
Molecule 2 - 5-MER PEPTIDE FROM HEAT SHOCK PROTEIN HSP 90
    ChainsG, H
    EngineeredYES
    Other DetailsTHIS SEQUENCE IS OCCURS NATURALLY IN HUMAN
    SynonymHSP90
    SyntheticYES

 Structural Features

(-) Chains, Units

  12345
Asymmetric/Biological Unit ABCGH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 1QZ2)

(-) Sites  (0, 0)

(no "Site" information available for 1QZ2)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1QZ2)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1QZ2)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 1QZ2)

(-) PROSITE Motifs  (3, 15)

Asymmetric/Biological Unit (3, 15)
 PROSITEUniProtKBPDB
No.IDACDescriptionIDLocationCountLocation
1FKBP_PPIASEPS50059 FKBP-type peptidyl-prolyl cis-trans isomerase domain profile.FKBP4_HUMAN50-138
167-253
 
 
  3-
A:167-253
B:167-253
C:167-253
2TPRPS50005 TPR repeat profile.FKBP4_HUMAN270-303
 
 
319-352
 
 
353-386
 
 
  9A:270-303
B:270-303
C:270-303
A:319-352
B:319-352
C:319-352
A:353-386
B:353-386
C:353-386
3TPR_REGIONPS50293 TPR repeat region circular profile.FKBP4_HUMAN270-303
 
 
319-386
 
 
  6A:270-303
B:270-303
C:270-303
A:319-386
B:319-386
C:319-386

(-) Exons   (8, 23)

Asymmetric/Biological Unit (8, 23)
 ENSEMBLUniProtKBPDB
No.Transcript IDExonExon IDGenome LocationLengthIDLocationLengthCountLocationLength
1.1ENST000000010081ENSE00000802791chr12:2904119-2904410292FKBP4_HUMAN1-35350--
1.2ENST000000010082ENSE00000713106chr12:2906304-2906448145FKBP4_HUMAN36-84490--
1.3ENST000000010083ENSE00000713108chr12:2906895-2907037143FKBP4_HUMAN84-131480--
1.4ENST000000010084ENSE00000713109chr12:2907872-2907992121FKBP4_HUMAN132-172413A:1-172 (gaps)
B:1-172 (gaps)
C:1-172 (gaps)
34
34
34
1.5ENST000000010085ENSE00000713111chr12:2908254-2908410157FKBP4_HUMAN172-224533A:172-224
B:172-224
C:172-224
53
53
53
1.6ENST000000010086ENSE00000713114chr12:2909016-290910691FKBP4_HUMAN224-254313A:224-254
B:224-254
C:224-254
31
31
31
1.7ENST000000010087ENSE00000713116chr12:2909205-290928884FKBP4_HUMAN255-282283A:255-282
B:255-282
C:255-282
28
28
28
1.8ENST000000010088ENSE00000713118chr12:2909558-2909743186FKBP4_HUMAN283-344623A:283-344
B:283-344
C:283-344
62
62
62
1.9ENST000000010089ENSE00000713120chr12:2910283-2910522240FKBP4_HUMAN345-424803A:345-424
B:345-424
C:345-424
80
80
80
1.10ENST0000000100810ENSE00000802792chr12:2912317-2913124808FKBP4_HUMAN425-459353A:425-425
B:425-425
C:425-425
1
1
1

2.1aENST000003716461aENSE00001361028chr6:44214824-44214932109HS90B_HUMAN-00--
2.3bENST000003716463bENSE00002201694chr6:44216367-44216513147HS90B_HUMAN1-49490--
2.4bENST000003716464bENSE00002189486chr6:44217114-44217320207HS90B_HUMAN50-118690--
2.5aENST000003716465aENSE00002183060chr6:44217412-44217571160HS90B_HUMAN119-172540--
2.6ENST000003716466ENSE00002150570chr6:44217758-44217891134HS90B_HUMAN172-216450--
2.7ENST000003716467ENSE00002189784chr6:44218028-44218336309HS90B_HUMAN217-3191030--
2.8ENST000003716468ENSE00002147387chr6:44218785-44218950166HS90B_HUMAN320-375560--
2.9ENST000003716469ENSE00001140344chr6:44219155-44219345191HS90B_HUMAN375-438640--
2.10ENST0000037164610ENSE00001140336chr6:44219474-44219621148HS90B_HUMAN439-488500--
2.11dENST0000037164611dENSE00000974672chr6:44219736-44220004269HS90B_HUMAN488-577900--
2.12ENST0000037164612ENSE00000974673chr6:44220782-44221115334HS90B_HUMAN578-6891120--
2.13aENST0000037164613aENSE00001427294chr6:44221226-44221620395HS90B_HUMAN689-724362G:1-5
H:1-5
5
5

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:285
 aligned with FKBP4_HUMAN | Q02790 from UniProtKB/Swiss-Prot  Length:459

    Alignment length:287
                                   148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       
          FKBP4_HUMAN   139 GEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKA 425
               SCOP domains ------d1qz2a2 A:145-257 FKBP52, N-terminal domains                                                                     d1qz2a1 A:258-425 FKBP52 (FKBP4), C-terminal domain                                                                                                                      SCOP domains
               CATH domains 1qz2  A01 A:1-261  [code=3.10.50.40, no name defined]                                                                      1qz2A02 A:262-425  [code=1.25.40.10, no name defined]                                                                                                                CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....--.....eeeeeee............eeeeeeeeee..eeeeee..eee..hhhhhh.hhhhhhhhh......eeeeee.hhhh................eeeeeeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----------------------------FKBP_PPIASE  PDB: A:167-253 UniProt: 167-253                                           ----------------TPR_REGION  PDB: A:270-303        ---------------TPR_REGION  PDB: A:319-386 UniProt: 319-386                         --------------------------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------TPR  PDB: A:270-303               ---------------TPR  PDB: A:319-352               TPR  PDB: A:353-386               --------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.4  PDB: A:1-172 (gaps)     ---------------------------------------------------Exon 1.6  PDB: A:224-254       Exon 1.7  PDB: A:255-282    Exon 1.8  PDB: A:283-344 UniProt: 283-344                     Exon 1.9  PDB: A:345-424 UniProt: 345-424                                       1 Transcript 1 (1)
           Transcript 1 (2) ---------------------------------Exon 1.5  PDB: A:172-224 UniProt: 172-224            --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1qz2 A   1 GSHM--EEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKA 425
                               |  |148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       
                               4  |                                                                                                                                                                                                                                                                                        
                                145                                                                                                                                                                                                                                                                                        

Chain B from PDB  Type:PROTEIN  Length:285
 aligned with FKBP4_HUMAN | Q02790 from UniProtKB/Swiss-Prot  Length:459

    Alignment length:287
                                   148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       
          FKBP4_HUMAN   139 GEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKA 425
               SCOP domains ------d1qz2b2 B:145-257 FKBP52, N-terminal domains                                                                     d1qz2b1 B:258-425 FKBP52 (FKBP4), C-terminal domain                                                                                                                      SCOP domains
               CATH domains 1qz2  B01 B:1-261  [code=3.10.50.40, no name defined]                                                                      1qz2B02 B:262-425  [code=1.25.40.10, no name defined]                                                                                                                CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....--.....eeee...............eee....ee....eee....eee..hhhhhh.hhhhhhhhh......eeeeee.hhhh.....hhhhh......eeeeee...ee...hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----------------------------FKBP_PPIASE  PDB: B:167-253 UniProt: 167-253                                           ----------------TPR_REGION  PDB: B:270-303        ---------------TPR_REGION  PDB: B:319-386 UniProt: 319-386                         --------------------------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------TPR  PDB: B:270-303               ---------------TPR  PDB: B:319-352               TPR  PDB: B:353-386               --------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.4  PDB: B:1-172 (gaps)     ---------------------------------------------------Exon 1.6  PDB: B:224-254       Exon 1.7  PDB: B:255-282    Exon 1.8  PDB: B:283-344 UniProt: 283-344                     Exon 1.9  PDB: B:345-424 UniProt: 345-424                                       1 Transcript 1 (1)
           Transcript 1 (2) ---------------------------------Exon 1.5  PDB: B:172-224 UniProt: 172-224            --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1qz2 B   1 GSHM--EEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKA 425
                               |  |148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       
                               4  |                                                                                                                                                                                                                                                                                        
                                145                                                                                                                                                                                                                                                                                        

Chain C from PDB  Type:PROTEIN  Length:285
 aligned with FKBP4_HUMAN | Q02790 from UniProtKB/Swiss-Prot  Length:459

    Alignment length:287
                                   148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       
          FKBP4_HUMAN   139 GEDLTEEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKA 425
               SCOP domains ------d1qz2c2 C:145-257 FKBP52, N-terminal domains                                                                     d1qz2c1 C:258-425 FKBP52 (FKBP4), C-terminal domain                                                                                                                      SCOP domains
               CATH domains 1qz2  C01 C:1-261  [code=3.10.50.40, no name defined]                                                                      1qz2C02 C:262-425  [code=1.25.40.10, no name defined]                                                                                                                CATH domains
           Pfam domains (1) ---------------------FKBP_C-1qz2C10 C:160-250                                                                   ------------------------------------------------------------------------------------------------------TPR_1-1qz2C01 C:353-386           --------------------------------------- Pfam domains (1)
           Pfam domains (2) ---------------------FKBP_C-1qz2C11 C:160-250                                                                   ------------------------------------------------------------------------------------------------------TPR_1-1qz2C02 C:353-386           --------------------------------------- Pfam domains (2)
           Pfam domains (3) ---------------------FKBP_C-1qz2C12 C:160-250                                                                   ------------------------------------------------------------------------------------------------------TPR_1-1qz2C03 C:353-386           --------------------------------------- Pfam domains (3)
           Pfam domains (4) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPR_1-1qz2C04 C:353-386           --------------------------------------- Pfam domains (4)
           Pfam domains (5) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPR_1-1qz2C05 C:353-386           --------------------------------------- Pfam domains (5)
           Pfam domains (6) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPR_1-1qz2C06 C:353-386           --------------------------------------- Pfam domains (6)
           Pfam domains (7) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPR_1-1qz2C07 C:353-386           --------------------------------------- Pfam domains (7)
           Pfam domains (8) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPR_1-1qz2C08 C:353-386           --------------------------------------- Pfam domains (8)
           Pfam domains (9) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TPR_1-1qz2C09 C:353-386           --------------------------------------- Pfam domains (9)
         Sec.struct. author ....--.....eee................eeeeeeeee....eeeeeeeeee..hhhhhh.hhhhhhhhhh........eee.....................eee..eeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                PROSITE (1) ----------------------------FKBP_PPIASE  PDB: C:167-253 UniProt: 167-253                                           ----------------TPR_REGION  PDB: C:270-303        ---------------TPR_REGION  PDB: C:319-386 UniProt: 319-386                         --------------------------------------- PROSITE (1)
                PROSITE (2) -----------------------------------------------------------------------------------------------------------------------------------TPR  PDB: C:270-303               ---------------TPR  PDB: C:319-352               TPR  PDB: C:353-386               --------------------------------------- PROSITE (2)
           Transcript 1 (1) Exon 1.4  PDB: C:1-172 (gaps)     ---------------------------------------------------Exon 1.6  PDB: C:224-254       Exon 1.7  PDB: C:255-282    Exon 1.8  PDB: C:283-344 UniProt: 283-344                     Exon 1.9  PDB: C:345-424 UniProt: 345-424                                       1 Transcript 1 (1)
           Transcript 1 (2) ---------------------------------Exon 1.5  PDB: C:172-224 UniProt: 172-224            --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (2)
                 1qz2 C   1 GSHM--EEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYYKDKLFDQRELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFERLAEEENKA 425
                               |  |148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398       408       418       
                               4  |                                                                                                                                                                                                                                                                                        
                                145                                                                                                                                                                                                                                                                                        

Chain G from PDB  Type:PROTEIN  Length:5
 aligned with HS90B_HUMAN | P08238 from UniProtKB/Swiss-Prot  Length:724

    Alignment length:5
          HS90B_HUMAN   720 MEEVD 724
               SCOP domains ----- SCOP domains
               CATH domains ----- CATH domains
               Pfam domains ----- Pfam domains
         Sec.struct. author ..... Sec.struct. author
                 SAPs(SNPs) ----- SAPs(SNPs)
                    PROSITE ----- PROSITE
               Transcript 2 2.13a Transcript 2
                 1qz2 G   1 MEEVD   5

Chain H from PDB  Type:PROTEIN  Length:5
 aligned with HS90B_HUMAN | P08238 from UniProtKB/Swiss-Prot  Length:724

    Alignment length:5
          HS90B_HUMAN   720 MEEVD 724
               SCOP domains ----- SCOP domains
               CATH domains ----- CATH domains
               Pfam domains ----- Pfam domains
         Sec.struct. author ..... Sec.struct. author
                 SAPs(SNPs) ----- SAPs(SNPs)
                    PROSITE ----- PROSITE
               Transcript 2 2.13a Transcript 2
                 1qz2 H   1 MEEVD   5

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 6)

Asymmetric/Biological Unit

(-) CATH Domains  (2, 6)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (2, 12)

Asymmetric/Biological Unit
(-)
Clan: TPR (230)
(-)
Family: TPR_1 (18)
1aTPR_1-1qz2C01C:353-386
1bTPR_1-1qz2C02C:353-386
1cTPR_1-1qz2C03C:353-386
1dTPR_1-1qz2C04C:353-386
1eTPR_1-1qz2C05C:353-386
1fTPR_1-1qz2C06C:353-386
1gTPR_1-1qz2C07C:353-386
1hTPR_1-1qz2C08C:353-386
1iTPR_1-1qz2C09C:353-386
(-)
Family: FKBP_C (58)
2aFKBP_C-1qz2C10C:160-250
2bFKBP_C-1qz2C11C:160-250
2cFKBP_C-1qz2C12C:160-250

(-) Gene Ontology  (89, 99)

Asymmetric/Biological Unit(hide GO term definitions)
Chain A,B,C   (FKBP4_HUMAN | Q02790)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0005528    FK506 binding    Interacting selectively and non-covalently with the 23-membered macrolide lactone FK506.
    GO:0005525    GTP binding    Interacting selectively and non-covalently with GTP, guanosine triphosphate.
    GO:0032767    copper-dependent protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules), in the presence of copper.
    GO:0035259    glucocorticoid receptor binding    Interacting selectively and non-covalently with a glucocorticoid receptor.
    GO:0031072    heat shock protein binding    Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
    GO:0016853    isomerase activity    Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.
    GO:0003755    peptidyl-prolyl cis-trans isomerase activity    Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
    GO:0051219    phosphoprotein binding    Interacting selectively and non-covalently with a phosphorylated protein.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0030674    protein binding, bridging    The binding activity of a molecule that brings together two or more protein molecules, or a protein and another macromolecule or complex, through a selective, non-covalent, often stoichiometric interaction, permitting those molecules to function in a coordinated way.
    GO:0048156    tau protein binding    Interacting selectively and non-covalently with tau protein. tau is a microtubule-associated protein, implicated in Alzheimer's disease, Down Syndrome and ALS.
biological process
    GO:0030521    androgen receptor signaling pathway    Any series of molecular signals generated as a consequence of an androgen binding to its receptor.
    GO:0061077    chaperone-mediated protein folding    The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone.
    GO:0006825    copper ion transport    The directed movement of copper (Cu) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
    GO:0007566    embryo implantation    Attachment of the blastocyst to the uterine lining.
    GO:0046661    male sex differentiation    The establishment of the sex of a male organism by physical differentiation.
    GO:0031115    negative regulation of microtubule polymerization    Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization.
    GO:0031111    negative regulation of microtubule polymerization or depolymerization    Any process that stops, prevents, or reduces the frequency, rate or extent of microtubule polymerization or depolymerization.
    GO:0010977    negative regulation of neuron projection development    Any process that decreases the rate, frequency or extent of neuron projection development. Neuron projection development is the process whose specific outcome is the progression of a neuron projection over time, from its formation to the mature structure. A neuron projection is any process extending from a neural cell, such as axons or dendrites (collectively called neurites).
    GO:0030850    prostate gland development    The process whose specific outcome is the progression of the prostate gland over time, from its formation to the mature structure. The prostate gland is a partly muscular, partly glandular body that is situated near the base of the mammalian male urethra and secretes an alkaline viscid fluid which is a major constituent of the ejaculatory fluid.
    GO:0031503    protein complex localization    A localization process that acts on a protein complex; the complex is transported to, or maintained in, a specific location.
    GO:0006457    protein folding    The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
    GO:0000413    protein peptidyl-prolyl isomerization    The modification of a protein by cis-trans isomerization of a proline residue.
    GO:1900034    regulation of cellular response to heat    Any process that modulates the frequency, rate or extent of cellular response to heat.
    GO:0048608    reproductive structure development    The reproductive developmental process whose specific outcome is the progression of structures that will be used in the process of creating new individuals from one or more parents, from their formation to the mature structures.
    GO:0006463    steroid hormone receptor complex assembly    The aggregation, arrangement and bonding together of a set of components to form a steroid hormone receptor complex, an intracellular receptor that binds steroid hormones. The complex is often a dimer, and forms after the steroid has bound the receptor.
cellular component
    GO:0030424    axon    The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
    GO:0044295    axonal growth cone    The migrating motile tip of a growing nerve cell axon.
    GO:0042995    cell projection    A prolongation or process extending from a cell, e.g. a flagellum or axon.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005856    cytoskeleton    Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0005789    endoplasmic reticulum membrane    The lipid bilayer surrounding the endoplasmic reticulum.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0005874    microtubule    Any of the long, generally straight, hollow tubes of internal diameter 12-15 nm and external diameter 24 nm found in a wide variety of eukaryotic cells; each consists (usually) of 13 protofilaments of polymeric tubulin, staggered in such a manner that the tubulin monomers are arranged in a helical pattern on the microtubular surface, and with the alpha/beta axes of the tubulin subunits parallel to the long axis of the tubule; exist in equilibrium with pool of tubulin monomers and can be rapidly assembled or disassembled in response to physiological stimuli; concerned with force generation, e.g. in the spindle.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0043005    neuron projection    A prolongation or process extending from a nerve cell, e.g. an axon or dendrite.
    GO:0043025    neuronal cell body    The portion of a neuron that includes the nucleus, but excludes cell projections such as axons and dendrites.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0048471    perinuclear region of cytoplasm    Cytoplasm situated near, or occurring around, the nucleus.
    GO:0043234    protein complex    A stable macromolecular complex composed (only) of two or more polypeptide subunits along with any covalently attached molecules (such as lipid anchors or oligosaccharide) or non-protein prosthetic groups (such as nucleotides or metal ions). Prosthetic group in this context refers to a tightly bound cofactor. The component polypeptide subunits may be identical.

Chain G,H   (HS90B_HUMAN | P08238)
molecular function
    GO:0005524    ATP binding    Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
    GO:0002135    CTP binding    Interacting selectively and non-covalently with CTP, cytidine 5'-triphosphate.
    GO:0005525    GTP binding    Interacting selectively and non-covalently with GTP, guanosine triphosphate.
    GO:0023026    MHC class II protein complex binding    Interacting selectively and non-covalently with the class II major histocompatibility complex.
    GO:0030911    TPR domain binding    Interacting selectively and non-covalently with a tetratricopeptide repeat (TPR) domain of a protein, the consensus sequence of which is defined by a pattern of small and large hydrophobic amino acids and a structure composed of helices.
    GO:0002134    UTP binding    Interacting selectively and non-covalently with UTP, uridine 5'-triphosphate.
    GO:0032564    dATP binding    Interacting selectively and non-covalently with dATP, deoxyadenosine triphosphate.
    GO:0003725    double-stranded RNA binding    Interacting selectively and non-covalently with double-stranded RNA.
    GO:0042826    histone deacetylase binding    Interacting selectively and non-covalently with the enzyme histone deacetylase.
    GO:0044325    ion channel binding    Interacting selectively and non-covalently with one or more specific sites on an ion channel, a protein complex that spans a membrane and forms a water-filled channel across the phospholipid bilayer allowing selective ion transport down its electrochemical gradient.
    GO:0019900    kinase binding    Interacting selectively and non-covalently with a kinase, any enzyme that catalyzes the transfer of a phosphate group.
    GO:0030235    nitric-oxide synthase regulator activity    Modulates the activity of nitric oxide synthase.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0005515    protein binding    Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
    GO:0019901    protein kinase binding    Interacting selectively and non-covalently with a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.
    GO:0019887    protein kinase regulator activity    Modulates the activity of a protein kinase, an enzyme which phosphorylates a protein.
    GO:0017098    sulfonylurea receptor binding    Interacting selectively and non-covalently with the sulfonylurea receptor, a regulatory subunit of the ATP-sensitive potassium ion channel.
    GO:0051082    unfolded protein binding    Interacting selectively and non-covalently with an unfolded protein.
biological process
    GO:0038096    Fc-gamma receptor signaling pathway involved in phagocytosis    An Fc-gamma receptor signaling pathway that contributes to the endocytic engulfment of external particulate material by phagocytes.
    GO:0071353    cellular response to interleukin-4    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-4 stimulus.
    GO:0071407    cellular response to organic cyclic compound    Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic cyclic compound stimulus.
    GO:0043066    negative regulation of apoptotic process    Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process.
    GO:0043524    negative regulation of neuron apoptotic process    Any process that stops, prevents, or reduces the frequency, rate or extent of cell death by apoptotic process in neurons.
    GO:0032435    negative regulation of proteasomal ubiquitin-dependent protein catabolic process    Any process that stops, prevents, or reduces the frequency, rate or extent of the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, and mediated by the proteasome.
    GO:0001890    placenta development    The process whose specific outcome is the progression of the placenta over time, from its formation to the mature structure. The placenta is an organ of metabolic interchange between fetus and mother, partly of embryonic origin and partly of maternal origin.
    GO:0045793    positive regulation of cell size    Any process that increases cell size.
    GO:0045429    positive regulation of nitric oxide biosynthetic process    Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of nitric oxide.
    GO:0032092    positive regulation of protein binding    Any process that activates or increases the frequency, rate or extent of protein binding.
    GO:0033160    positive regulation of protein import into nucleus, translocation    Any process that activates or increases the vectorial transfer of a protein from the cytoplasm into the nucleus, across the nuclear membrane.
    GO:0071902    positive regulation of protein serine/threonine kinase activity    Any process that increases the rate, frequency, or extent of protein serine/threonine kinase activity.
    GO:0006457    protein folding    The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
    GO:0050821    protein stabilization    Any process involved in maintaining the structure and integrity of a protein and preventing it from degradation or aggregation.
    GO:1900034    regulation of cellular response to heat    Any process that modulates the frequency, rate or extent of cellular response to heat.
    GO:0060334    regulation of interferon-gamma-mediated signaling pathway    Any process that modulates the rate, frequency or extent of the series of molecular events generated as a consequence of interferon-gamma binding to a cell surface receptor.
    GO:0031396    regulation of protein ubiquitination    Any process that modulates the frequency, rate or extent of the addition of ubiquitin groups to a protein.
    GO:0060338    regulation of type I interferon-mediated signaling pathway    Any process that modulates the rate, frequency or extent of a type I interferon-mediated signaling pathway. A type I interferon-mediated signaling pathway is the series of molecular events generated as a consequence of a type I interferon binding to a cell surface receptor.
    GO:0010033    response to organic substance    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organic substance stimulus.
    GO:0009651    response to salt stress    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
    GO:0006950    response to stress    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
    GO:0006986    response to unfolded protein    Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an unfolded protein stimulus.
    GO:0097435    supramolecular fiber organization    A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a supramolecular fiber, a polymer consisting of an indefinite number of protein or protein complex subunits that have polymerised to form a fiber-shaped structure.
    GO:0019062    virion attachment to host cell    The process by which a virion protein binds to molecules on the host cellular surface or host cell surface projection.
cellular component
    GO:0008180    COP9 signalosome    A protein complex that catalyzes the deneddylation of proteins, including the cullin component of SCF ubiquitin E3 ligase; deneddylation increases the activity of cullin family ubiquitin ligases. The signalosome is involved in many regulatory process, including some which control development, in many species; also regulates photomorphogenesis in plants; in many species its subunits are highly similar to those of the proteasome.
    GO:0016324    apical plasma membrane    The region of the plasma membrane located at the apical end of the cell.
    GO:0016323    basolateral plasma membrane    The region of the plasma membrane that includes the basal end and sides of the cell. Often used in reference to animal polarized epithelial membranes, where the basal membrane is the part attached to the extracellular matrix, or in plant cells, where the basal membrane is defined with respect to the zygotic axis.
    GO:0031526    brush border membrane    The portion of the plasma membrane surrounding the brush border.
    GO:0009986    cell surface    The external part of the cell wall and/or plasma membrane.
    GO:0005737    cytoplasm    All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
    GO:0005829    cytosol    The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
    GO:0070062    extracellular exosome    A vesicle that is released into the extracellular region by fusion of the limiting endosomal membrane of a multivesicular body with the plasma membrane. Extracellular exosomes, also simply called exosomes, have a diameter of about 40-100 nm.
    GO:0016234    inclusion body    A discrete intracellular part formed of aggregated molecules such as proteins or other biopolymers.
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0042470    melanosome    A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.
    GO:0016020    membrane    A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005654    nucleoplasm    That part of the nuclear content other than the chromosomes or the nucleolus.

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  HS90B_HUMAN | P08238
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FKBP4_HUMAN | Q027901n1a 1p5q 1q1c 4drj 4lav 4law 4lax 4lay 4tw8
        HS90B_HUMAN | P082381uym 2l6j 3fwv 3nmq 3pry 3uq3 5fwk 5fwl 5fwm 5fwp

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 1QZ2)