Chain A from PDB Type:PROTEIN Length:212
aligned with TSN_MOUSE | Q62348 from UniProtKB/Swiss-Prot Length:228
Alignment length:218
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
TSN_MOUSE 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLKAREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFN 218
SCOP domains d1keya_ A: Translin SCOP domains
CATH domains 1keyA01 A:1-132 Translin; domain 1 1keyA02 A:133-218 Translin; domain 2 CATH domains
Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..------hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh............hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1key A 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVH------DIPKRCLKAREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFN 218
10 20 30 40 | - | 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
46 53
Chain B from PDB Type:PROTEIN Length:221
aligned with TSN_MOUSE | Q62348 from UniProtKB/Swiss-Prot Length:228
Alignment length:221
1
| 7 17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217
TSN_MOUSE - ---MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLKAREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFN 218
SCOP domains d1keyb_ B: Translin SCOP domains
CATH domains 1keyB01 B:-3-132 Translin; domain 1 1keyB02 B:133-218 Translin; domain 2 CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh............hhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1key B -3 FATMSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLKAREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFN 218
|| 7 17 27 37 47 57 67 77 87 97 107 117 127 137 147 157 167 177 187 197 207 217
-1|
1
Chain C from PDB Type:PROTEIN Length:210
aligned with TSN_MOUSE | Q62348 from UniProtKB/Swiss-Prot Length:228
Alignment length:217
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
TSN_MOUSE 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLKAREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGF 217
SCOP domains d1keyc_ C: Translin SCOP domains
CATH domains 1keyC01 C:1-132 Translin; domain 1 1keyC02 C:133-217 Translin; domain 2 CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
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SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1key C 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGV-------DIPKRCLKAREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGF 217
10 20 30 40 | - | 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
45 53
Chain D from PDB Type:PROTEIN Length:211
aligned with TSN_MOUSE | Q62348 from UniProtKB/Swiss-Prot Length:228
Alignment length:216
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
TSN_MOUSE 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGTGFQDIPKRCLKAREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRG 216
SCOP domains d1keyd_ D: Translin SCOP domains
CATH domains 1keyD01 D:1-132 Translin; domain 1 1keyD02 D:133-216 Translin; domain 2 CATH domains
Pfam domains (1) -----------------Translin-1keyD01 D:18-216 Pfam domains (1)
Pfam domains (2) -----------------Translin-1keyD02 D:18-216 Pfam domains (2)
Pfam domains (3) -----------------Translin-1keyD03 D:18-216 Pfam domains (3)
Pfam domains (4) -----------------Translin-1keyD04 D:18-216 Pfam domains (4)
Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..-----.hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhh............hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
1key D 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVH-----QDIPKRCLKAREHFSTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRG 216
10 20 30 40 | - | 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210
46 52
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |