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(-) Description

Title :  STRUCTURE OF RNA DUPLEXES (CIGCGICG)2
 
Authors :  X. Chen, R. Kierzek, D. H. Turner
Date :  23 Oct 00  (Deposition) - 01 Aug 01  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B
Keywords :  Double Helix, Rna (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  X. Chen, R. Kierzek, D. H. Turner
Stability And Structure Of Rna Duplexes Containing Isoguanosine And Isocytidine.
J. Am. Chem. Soc. V. 123 1267 2001
PubMed-ID: 11456697  |  Reference-DOI: 10.1021/JA002623I
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 5'-R(*CP*(IG)P*CP*GP*(IC)P*G)-3'
    ChainsA, B
    EngineeredYES
    Other DetailsSOLID PHASE PHOSPHORAMIDITE CHEMISTRY
    SyntheticYES

 Structural Features

(-) Chains, Units

  
NMR Structure 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 4)

NMR Structure (2, 4)
No.NameCountTypeFull Name
1IC2Mod. ResidueISOCYTIDINE-5'-MONOPHOSPHATE
2IG2Mod. ResidueISOGUANOSINE-5'-MONOPHOSPHATE

(-) Sites  (0, 0)

(no "Site" information available for 1G3A)

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:RNA  Length:6
                                    
                   1g3a A 1 CgCGcG 6
                             |  | 
                             |  | 
                             2-IG 
                                5-IC

Chain B from PDB  Type:RNA  Length:6
                                    
                   1g3a B 1 CgCGcG 6
                             |  | 
                             |  | 
                             2-IG 
                                5-IC

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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 1G3A)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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