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(-) Description

Title :  PENTAMERIC MODEL OF THE BACTERIOPHAGE PHI29 PROHEAD RNA
 
Authors :  A. A. Simpson, Y. Tao, P. G. Leiman, M. O. Badasso, Y. He, P. J. Jardine, N. H. Olson, M. C. Morais, S. Grimes, D. L. Anderson, T. S. Baker, M. G. Rossmann
Date :  28 Aug 00  (Deposition) - 22 Dec 00  (Release) - 24 Feb 09  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  20.00
Chains :  Asym./Biol. Unit :  A,B,C,D,E
Keywords :  Dsrna Oligomeric Model, Prohead Rna, Bacteriophage Phi29 (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. A. Simpson, Y. Tao, P. G. Leiman, M. O. Badasso, Y. He, P. J. Jardine, N. H. Olson, M. C. Morais, S. Grimes, D. L. Anderson, T. S. Baker, M. G. Rossmann
Structure Of The Bacteriophage Phi29 Dna Packaging Motor.
Nature V. 408 745 2000
PubMed-ID: 11130079  |  Reference-DOI: 10.1038/35047129
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - BACTERIOPHAGE PHI29 PROHEAD RNA
    ChainsA, B, C, D, E
    Fragment1-120 BASE FRAGMENT
    MutationYES
    Organism ScientificBACILLUS PHAGE PHI29
    Organism Taxid10756

 Structural Features

(-) Chains, Units

  12345
Asymmetric/Biological Unit ABCDE

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Sites  (0, 0)

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 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:RNA  Length:109
                                                                                                                                             
                 1foq A   1 UCAAGGUACGGUACUUUUGUCAUGUGUAUGUGGGGAUUAAACCCUGAUUAGUUCAGCCCACAUACUUUGUUGAUUGGUUGUCAAUCAUGGCAAAAGUGCCGUACUUUGA 117
                               ||   11     || 24        34||      45        56        66        76        86        96       107||       
                               4|         17|            35|               54|                                              105|||       
                                6          21             37                56                                               107||       
                                                                                                                              108|       
                                                                                                                               110       

Chain B from PDB  Type:RNA  Length:109
                                                                                                                                             
                 1foq B   1 UCAAGGUACGGUACUUUUGUCAUGUGUAUGUGGGGAUUAAACCCUGAUUAGUUCAGCCCACAUACUUUGUUGAUUGGUUGUCAAUCAUGGCAAAAGUGCCGUACUUUGA 117
                               ||   11     || 24        34||      45        56        66        76        86        96       107||       
                               4|         17|            35|               54|                                              105|||       
                                6          21             37                56                                               107||       
                                                                                                                              108|       
                                                                                                                               110       

Chain C from PDB  Type:RNA  Length:109
                                                                                                                                             
                 1foq C   1 UCAAGGUACGGUACUUUUGUCAUGUGUAUGUGGGGAUUAAACCCUGAUUAGUUCAGCCCACAUACUUUGUUGAUUGGUUGUCAAUCAUGGCAAAAGUGCCGUACUUUGA 117
                               ||   11     || 24        34||      45        56        66        76        86        96       107||       
                               4|         17|            35|               54|                                              105|||       
                                6          21             37                56                                               107||       
                                                                                                                              108|       
                                                                                                                               110       

Chain D from PDB  Type:RNA  Length:109
                                                                                                                                             
                 1foq D   1 UCAAGGUACGGUACUUUUGUCAUGUGUAUGUGGGGAUUAAACCCUGAUUAGUUCAGCCCACAUACUUUGUUGAUUGGUUGUCAAUCAUGGCAAAAGUGCCGUACUUUGA 117
                               ||   11     || 24        34||      45        56        66        76        86        96       107||       
                               4|         17|            35|               54|                                              105|||       
                                6          21             37                56                                               107||       
                                                                                                                              108|       
                                                                                                                               110       

Chain E from PDB  Type:RNA  Length:109
                                                                                                                                             
                 1foq E   1 UCAAGGUACGGUACUUUUGUCAUGUGUAUGUGGGGAUUAAACCCUGAUUAGUUCAGCCCACAUACUUUGUUGAUUGGUUGUCAAUCAUGGCAAAAGUGCCGUACUUUGA 117
                               ||   11     || 24        34||      45        56        66        76        86        96       107||       
                               4|         17|            35|               54|                                              105|||       
                                6          21             37                56                                               107||       
                                                                                                                              108|       
                                                                                                                               110       

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 Classification and Annotation

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