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(-) Description

Title :  STEROID TETHERED DNA, NMR, MINIMIZED AVERAGE STRUCTURE
 
Authors :  A. Denisov, A. Sandstrom, T. Maltseva, D. Pyshnyi, E. Ivanova, V. Zarytova, J. Chattopadhyaya
Date :  17 Jun 97  (Deposition) - 17 Sep 97  (Release) - 24 Feb 09  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A,B,C
Keywords :  Deoxyribonucleic Acid, Estrone, Dna, Nmr, Steroid Tethered (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  A. Y. Denisov, A. Sandstrom, T. V. Maltseva, D. V. Pyshnyi, E. M. Ivanova, V. F. Zarytova, J. Chattopadhyaya
The Nmr Structure Of Estrone (Es)-Tethered Tandem Dna Duplex: [D(5'Pcagcp3')-Es] + [Es-D(5'Ptcca3')]: D(5'Ptggagctg3').
J. Biomol. Struct. Dyn. V. 15 499 1997
PubMed-ID: 9439997
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - DNA (5'-D(P*TP*GP*GP*AP*GP*CP*TP*G)-3')
    ChainsA
    EngineeredYES
    SyntheticYES
 
Molecule 2 - DNA (5'-D(P*CP*AP*GP*C)-3')
    ChainsB
    EngineeredYES
    SyntheticYES
 
Molecule 3 - DNA (5'-D(P*TP*CP*CP*A)-3')
    ChainsC
    EngineeredYES
    SyntheticYES

 Structural Features

(-) Chains, Units

  
NMR Structure 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

NMR Structure (1, 2)
No.NameCountTypeFull Name
1ESO2Ligand/IonO3-PHOSPHONOESTRONE

(-) Sites  (2, 2)

NMR Structure (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREDG A:5 , DC B:12BINDING SITE FOR RESIDUE ESO B 17
2AC2SOFTWAREDA A:4 , DT C:13BINDING SITE FOR RESIDUE ESO C 18

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 1ESS)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 1ESS)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 1ESS)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:DNA  Length:8
                                       
                  1ess A  1 TGGAGCTG  8

Chain B from PDB  Type:DNA  Length:4
                                   
                  1ess B  9 CAGC 12

Chain C from PDB  Type:DNA  Length:4
                                   
                  1ess C 13 TCCA 16

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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 1ESS)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

NMR Structure(hide GO term definitions)
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