Chain A from PDB Type:PROTEIN Length:243
aligned with CHI2_HORVU | P23951 from UniProtKB/Swiss-Prot Length:266
Alignment length:243
33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263
CHI2_HORVU 24 SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPFA 266
SCOP domains d1cnsa_ A: Plant class II chitinase SCOP domains
CATH domains 1cnsA01 A:1-87,A:146-243 [code=1.10.530.10, no name defined] 1cnsA02 A:88-145 Endochitinase, domain 2 1cnsA01 A:1-87,A:146-243 [code=1.10.530.10, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhh..hhhhhhhhhh.............hhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh..........hhh........................................hhhhhhhhhhh.........hhhh.hhhhhhhhhhhhh.......hhhhhhhh.....hhhhhh.....hhhhhhhh...........hhhhhhhhhhhhhhhhh................. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------CHITINASE_19_1 -------------------------------------------------------------------------------------------------------CHITINASE_1------------------------------------------------------------------------------------ PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1cns A 1 SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFSGFGTTGSADVQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVSFKTAMWFWMTAQPPKPSSHAVIVGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPFA 243
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240
Chain B from PDB Type:PROTEIN Length:243
aligned with CHI2_HORVU | P23951 from UniProtKB/Swiss-Prot Length:266
Alignment length:243
33 43 53 63 73 83 93 103 113 123 133 143 153 163 173 183 193 203 213 223 233 243 253 263
CHI2_HORVU 24 SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVGFKTAIWFWMTAQPPKPSSHAVIAGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPFA 266
SCOP domains d1cnsb_ B: Plant class II chitinase SCOP domains
CATH domains 1cnsB01 B:1-87,B:146-243 [code=1.10.530.10, no name defined] 1cnsB02 B:88-145 Endochitinase, domain 2 1cnsB01 B:1-87,B:146-243 [code=1.10.530.10, no name defined] CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .hhh..hhhhhhhhhh.............hhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhh..........hhh........................................hhhhhhhhhhh.........hhhh.hhhhhhhhhhhhh.......hhhhhhhh.....hhhhhh.....hhhhhhhh...........hhhhhhhhhhhhhhhhh................. Sec.struct. author
SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------CHITINASE_19_1 -------------------------------------------------------------------------------------------------------CHITINASE_1------------------------------------------------------------------------------------ PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
1cns B 1 SVSSIVSRAQFDRMLLHRNDGACQAKGFYTYDAFVAAAAAFSGFGTTGSADVQKREVAAFLAQTSHETTGGWATAPDGAFAWGYCFKQERGASSDYCTPSAQWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVSFKTAMWFWMTAQPPKPSSHAVIVGQWSPSGADRAAGRVPGFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDCYSQRPFA 243
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 230 240
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |