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6TLI
Asym. Unit
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Asym.Unit (60 KB)
Biol.Unit 1 (54 KB)
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(1)
Title
:
THERMOLYSIN (60% ISOPROPANOL SOAKED CRYSTALS)
Authors
:
A. C. English, S. H. Done, C. R. Groom, R. E. Hubbard
Date
:
29 Oct 98 (Deposition) - 13 Mar 00 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Hydrolase, Metalloproteinase, Organic Solvent
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. C. English, S. H. Done, L. S. Caves, C. R. Groom, R. E. Hubbard
Locating Interaction Sites On Proteins: The Crystal Structure Of Thermolysin Soaked In 2% To 100% Isopropanol.
Proteins V. 37 628 1999
(for further references see the
PDB file header
)
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Hetero Components
(4, 9)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
2a: DIMETHYL SULFOXIDE (DMSa)
3a: ISOPROPYL ALCOHOL (IPAa)
3b: ISOPROPYL ALCOHOL (IPAb)
3c: ISOPROPYL ALCOHOL (IPAc)
4a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
4
Ligand/Ion
CALCIUM ION
2
DMS
1
Ligand/Ion
DIMETHYL SULFOXIDE
3
IPA
3
Ligand/Ion
ISOPROPYL ALCOHOL
4
ZN
1
Ligand/Ion
ZINC ION
[
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Sites
(9, 9)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
9: AC9 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:142 , HIS A:146 , GLU A:166 , HOH A:1002
BINDING SITE FOR RESIDUE ZN A 321
2
AC2
SOFTWARE
ASP A:138 , GLU A:177 , ASP A:185 , GLU A:187 , GLU A:190 , HOH A:1014
BINDING SITE FOR RESIDUE CA A 322
3
AC3
SOFTWARE
GLU A:177 , ASN A:183 , ASP A:185 , GLU A:190 , HOH A:1013 , HOH A:1030
BINDING SITE FOR RESIDUE CA A 323
4
AC4
SOFTWARE
ASP A:57 , ASP A:59 , GLN A:61 , HOH A:1016 , HOH A:1027 , HOH A:1047
BINDING SITE FOR RESIDUE CA A 324
5
AC5
SOFTWARE
TYR A:193 , THR A:194 , ILE A:197 , ASP A:200 , HOH A:1038 , HOH A:1065
BINDING SITE FOR RESIDUE CA A 325
6
AC6
SOFTWARE
HIS A:216 , SER A:218 , TYR A:251
BINDING SITE FOR RESIDUE DMS A 2000
7
AC7
SOFTWARE
GLU A:143 , ARG A:203 , HOH A:1067
BINDING SITE FOR RESIDUE IPA A 2001
8
AC8
SOFTWARE
TYR A:81 , TYR A:84 , SER A:92 , VAL A:148 , HOH A:1021
BINDING SITE FOR RESIDUE IPA A 2002
9
AC9
SOFTWARE
LEU A:202 , TYR A:211 , ASP A:213
BINDING SITE FOR RESIDUE IPA A 2003
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d6tlia_ (A:)
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Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Zincin-like
(701)
Superfamily
:
Metalloproteases (zincins), catalytic domain
(647)
Family
:
Thermolysin-like
(130)
Protein domain
:
Thermolysin
(121)
Bacillus thermoproteolyticus [TaxId: 1427]
(121)
1a
d6tlia_
A:
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CATH Domains
(2, 2)
Info
all CATH domains
1a: CATH_6tliA01 (A:6-154)
2a: CATH_6tliA02 (A:155-315)
View:
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Classes
(
)
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)
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)
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)
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)
Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
Elastase; domain 1
(68)
Homologous Superfamily
:
[code=3.10.170.10, no name defined]
(67)
Bacillus thermoproteolyticus. Organism_taxid: 1427
(53)
1a
6tliA01
A:6-154
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Neutral Protease; domain 2
(68)
Homologous Superfamily
:
Neutral Protease Domain 2
(68)
Bacillus thermoproteolyticus. Organism_taxid: 1427
(54)
2a
6tliA02
A:155-315
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Atom Selection
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Chain A
Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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Asym.Unit (60 KB)
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