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6HBW
Asym. Unit
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Asym.Unit (106 KB)
Biol.Unit 1 (100 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF DEOXY-HUMAN HEMOGLOBIN BETA6 GLU->TRP
Authors
:
D. J. Harrington, K. Adachi, W. E. Royer Jr.
Date
:
10 Sep 98 (Deposition) - 16 Sep 98 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Oxygen Transport, Hemoglobin, Oxygen Storage/Transport Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. J. Harrington, K. Adachi, W. E. Royer Jr.
Crystal Structure Of Deoxy-Human Hemoglobin Beta6 Glu --> Trp. Implications For The Structure And Formation Of The Sickle Cell Fiber.
J. Biol. Chem. V. 273 32690 1998
(for further references see the
PDB file header
)
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
1b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
1c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
1d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
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No.
Name
Count
Type
Full Name
1
HEM
4
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: MUT (AUTHOR)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR A:42 , PHE A:43 , HIS A:45 , PHE A:46 , HIS A:58 , LYS A:61 , LEU A:83 , LEU A:86 , HIS A:87 , LEU A:91 , VAL A:93 , ASN A:97 , PHE A:98 , LEU A:101 , LEU A:136 , HOH A:257 , HOH A:273
BINDING SITE FOR RESIDUE HEM A 153
2
AC2
SOFTWARE
HIS B:63 , LYS B:66 , VAL B:67 , LEU B:91 , HIS B:92 , LEU B:96 , ASN B:102 , PHE B:103 , LEU B:141 , HOH B:352
BINDING SITE FOR RESIDUE HEM B 153
3
AC3
SOFTWARE
TYR C:42 , PHE C:43 , HIS C:45 , PHE C:46 , HIS C:58 , LYS C:61 , LEU C:83 , LEU C:86 , HIS C:87 , LEU C:91 , VAL C:93 , ASN C:97 , PHE C:98 , LEU C:136 , HOH C:207
BINDING SITE FOR RESIDUE HEM C 153
4
AC4
SOFTWARE
HOH B:521 , PHE D:41 , PHE D:42 , HIS D:63 , LYS D:66 , VAL D:67 , PHE D:85 , LEU D:91 , HIS D:92 , LEU D:96 , ASN D:102 , PHE D:103 , LEU D:141
BINDING SITE FOR RESIDUE HEM D 153
5
MUT
AUTHOR
TRP B:6 , TRP D:6
MUTATED RESIDUE
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d6hbwa_ (A:)
1b: SCOP_d6hbwc_ (C:)
2a: SCOP_d6hbwb_ (B:)
2b: SCOP_d6hbwd_ (D:)
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Class
:
All alpha proteins
(14657)
Fold
:
Globin-like
(1351)
Superfamily
:
Globin-like
(1308)
Family
:
Globins
(1157)
Protein domain
:
Hemoglobin, alpha-chain
(292)
Human (Homo sapiens) [TaxId: 9606]
(217)
1a
d6hbwa_
A:
1b
d6hbwc_
C:
Protein domain
:
Hemoglobin, beta-chain
(292)
Human (Homo sapiens) [TaxId: 9606]
(210)
2a
d6hbwb_
B:
2b
d6hbwd_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_6hbwB00 (B:1-146)
1b: CATH_6hbwD00 (D:1-146)
1c: CATH_6hbwA00 (A:1-141)
1d: CATH_6hbwC00 (C:1-141)
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Organisms
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(
)
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Globin-like
(786)
Homologous Superfamily
:
Globins
(743)
Human (Homo sapiens)
(198)
1a
6hbwB00
B:1-146
1b
6hbwD00
D:1-146
1c
6hbwA00
A:1-141
1d
6hbwC00
C:1-141
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Pfam Domains
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