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5WV3
Asym. Unit
Info
Asym.Unit (229 KB)
Biol.Unit 1 (221 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF BOVINE LACTOPEROXIDASE WITH A PARTIAL GLU258-HEME LINKAGE AT 2.07 A RESOLUTION.
Authors
:
P. K. Singh, H. V. Sirohi, P. Kaur, S. Sharma, T. P. Singh
Date
:
21 Dec 16 (Deposition) - 15 Feb 17 (Release) - 08 Mar 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.07
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. K. Singh, H. V. Sirohi, P. Kaur, S. Sharma, T. P. Singh
Crystal Structure Of Bovine Lactoperoxidase With A Partial Glu258-Heme Linkage At 2. 07 A Resolution
To Be Published
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Hetero Components
(8, 24)
Info
All Hetero Components
1a: BROMIDE ION (BRa)
2a: CALCIUM ION (CAa)
3a: GLYCEROL (GOLa)
3b: GLYCEROL (GOLb)
4a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
5a: IODIDE ION (IODa)
5b: IODIDE ION (IODb)
5c: IODIDE ION (IODc)
6a: N-ACETYL-D-GLUCOSAMINE (NAGa)
6b: N-ACETYL-D-GLUCOSAMINE (NAGb)
6c: N-ACETYL-D-GLUCOSAMINE (NAGc)
6d: N-ACETYL-D-GLUCOSAMINE (NAGd)
6e: N-ACETYL-D-GLUCOSAMINE (NAGe)
7a: 1-(OXIDOSULFANYL)METHANAMINE (OSMa)
7b: 1-(OXIDOSULFANYL)METHANAMINE (OSMb)
7c: 1-(OXIDOSULFANYL)METHANAMINE (OSMc)
7d: 1-(OXIDOSULFANYL)METHANAMINE (OSMd)
7e: 1-(OXIDOSULFANYL)METHANAMINE (OSMe)
7f: 1-(OXIDOSULFANYL)METHANAMINE (OSMf)
7g: 1-(OXIDOSULFANYL)METHANAMINE (OSMg)
7h: 1-(OXIDOSULFANYL)METHANAMINE (OSMh)
7i: 1-(OXIDOSULFANYL)METHANAMINE (OSMi)
7j: 1-(OXIDOSULFANYL)METHANAMINE (OSMj)
8a: PHOSPHOSERINE (SEPa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
BR
1
Ligand/Ion
BROMIDE ION
2
CA
1
Ligand/Ion
CALCIUM ION
3
GOL
2
Ligand/Ion
GLYCEROL
4
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
5
IOD
3
Ligand/Ion
IODIDE ION
6
NAG
5
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
7
OSM
10
Ligand/Ion
1-(OXIDOSULFANYL)METHANAMINE
8
SEP
1
Mod. Amino Acid
PHOSPHOSERINE
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Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:110 , THR A:184 , PHE A:186 , ASP A:188 , SER A:190
binding site for residue CA A 601
02
AC2
SOFTWARE
MET A:101 , GLY A:104 , GLN A:105 , ASP A:108 , ASP A:112 , PHE A:113 , ALA A:114 , ARG A:255 , GLU A:258 , GLN A:259 , THR A:344 , PHE A:347 , ARG A:348 , GLY A:350 , HIS A:351 , PHE A:380 , ILE A:436 , ARG A:440 , BR A:620 , HOH A:713 , HOH A:811 , HOH A:815
binding site for residue HEM A 602
03
AC3
SOFTWARE
TRP A:46 , VAL A:342 , TRP A:452 , HOH A:853
binding site for residue IOD A 608
04
AC4
SOFTWARE
TYR A:85 , LEU A:86 , ASP A:87
binding site for residue OSM A 609
05
AC5
SOFTWARE
HIS A:377 , THR A:378 , HIS A:429 , HOH A:907
binding site for residue OSM A 610
06
AC6
SOFTWARE
HIS A:565 , ALA A:566 , PHE A:567 , GLN A:568
binding site for residue OSM A 611
07
AC7
SOFTWARE
ASN A:95 , ARG A:96 , ARG A:504 , ARG A:506 , NAG A:603
binding site for residue OSM A 612
08
AC8
SOFTWARE
ASN A:80 , LYS A:81 , PRO A:145
binding site for residue OSM A 613
09
AC9
SOFTWARE
PRO A:11 , LEU A:12 , LYS A:462 , THR A:463 , GLY A:466
binding site for residue OSM A 614
10
AD1
SOFTWARE
ARG A:76 , LYS A:150 , ASN A:419 , HOH A:716 , HOH A:803 , HOH A:890
binding site for residue OSM A 615
11
AD2
SOFTWARE
ASN A:68
binding site for residue OSM A 616
12
AD3
SOFTWARE
GLU A:363 , TYR A:365 , ARG A:397 , HIS A:558 , ILE A:559 , THR A:560 , LYS A:561
binding site for residue OSM A 617
13
AD4
SOFTWARE
THR A:23 , ILE A:24 , THR A:25 , PRO A:197 , HOH A:909
binding site for residue GOL A 618
14
AD5
SOFTWARE
HIS A:109 , GLU A:258 , HEM A:602 , HOH A:811
binding site for residue BR A 620
15
AD6
SOFTWARE
OSM A:622
binding site for residue IOD A 621
16
AD7
SOFTWARE
VAL A:215 , ASN A:216 , GLN A:217 , GLU A:218 , PRO A:228 , IOD A:621
binding site for residue OSM A 622
17
AD8
SOFTWARE
SEP A:198 , LEU A:199 , ARG A:202 , LYS A:474
binding site for residue GOL A 623
18
AD9
SOFTWARE
ASN A:95 , ILE A:315 , OSM A:612 , HOH A:722 , HOH A:927
binding site for Mono-Saccharide NAG A 603 bound to ASN A 95
19
AE1
SOFTWARE
ASN A:205 , SER A:208 , ALA A:214 , VAL A:215 , GLN A:217
binding site for Poly-Saccharide residues NAG A 604 through NAG A 605 bound to ASN A 205
20
AE2
SOFTWARE
ASN A:241 , ALA A:244 , TRP A:384
binding site for Mono-Saccharide NAG A 606 bound to ASN A 241
21
AE3
SOFTWARE
ASN A:332 , VAL A:335 , HOH A:708
binding site for Mono-Saccharide NAG A 607 bound to ASN A 332
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SAPs(SNPs)/Variants
(0, 0)
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CATH Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (229 KB)
Header - Asym.Unit
Biol.Unit 1 (221 KB)
Header - Biol.Unit 1
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