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5VTU
Biol. Unit 4
Info
Asym.Unit (506 KB)
Biol.Unit 1 (169 KB)
Biol.Unit 2 (168 KB)
Biol.Unit 3 (168 KB)
Biol.Unit 4 (493 KB)
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Title
:
CRYSTAL STRUCTURE OF THE A/HONG KONG/1/1968 (H3N2) INFLUENZA VIRUS HEMAGGLUTININ G225L/L226S MUTANT APO FORM
Authors
:
N. C. Wu, I. A. Wilson
Date
:
18 May 17 (Deposition) - 28 Jun 17 (Release) - 28 Jun 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.45
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Biol. Unit 4: A,B,C,D,E,F (1x)
Keywords
:
Influenza A Virus, Hemagglutinin, Mutant, Receptor Binding, Viral Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
N. C. Wu, J. Xie, T. Zheng, C. M. Nycholat, G. Grande, J. C. Paulson, R. A. Lerner, I. A. Wilson
Diversity Of Functionally Permissive Sequences In The Receptor-Binding Site Of Influenza Hemagglutinin.
Cell Host Microbe V. 21 742 2017
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Hetero Components
(3, 24)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
1c: BETA-D-MANNOSE (BMAc)
2a: ALPHA-D-MANNOSE (MANa)
2b: ALPHA-D-MANNOSE (MANb)
3a: N-ACETYL-D-GLUCOSAMINE (NAGa)
3b: N-ACETYL-D-GLUCOSAMINE (NAGb)
3c: N-ACETYL-D-GLUCOSAMINE (NAGc)
3d: N-ACETYL-D-GLUCOSAMINE (NAGd)
3e: N-ACETYL-D-GLUCOSAMINE (NAGe)
3f: N-ACETYL-D-GLUCOSAMINE (NAGf)
3g: N-ACETYL-D-GLUCOSAMINE (NAGg)
3h: N-ACETYL-D-GLUCOSAMINE (NAGh)
3i: N-ACETYL-D-GLUCOSAMINE (NAGi)
3j: N-ACETYL-D-GLUCOSAMINE (NAGj)
3k: N-ACETYL-D-GLUCOSAMINE (NAGk)
3l: N-ACETYL-D-GLUCOSAMINE (NAGl)
3m: N-ACETYL-D-GLUCOSAMINE (NAGm)
3n: N-ACETYL-D-GLUCOSAMINE (NAGn)
3o: N-ACETYL-D-GLUCOSAMINE (NAGo)
3p: N-ACETYL-D-GLUCOSAMINE (NAGp)
3q: N-ACETYL-D-GLUCOSAMINE (NAGq)
3r: N-ACETYL-D-GLUCOSAMINE (NAGr)
3s: N-ACETYL-D-GLUCOSAMINE (NAGs)
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No.
Name
Count
Type
Full Name
1
BMA
3
Ligand/Ion
BETA-D-MANNOSE
2
MAN
2
Ligand/Ion
ALPHA-D-MANNOSE
3
NAG
19
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:38 , ALA A:39 , THR A:40 , HOH A:501
binding site for Mono-Saccharide NAG A 401 bound to ASN A 38
02
AC2
SOFTWARE
GLN A:80 , ASN A:81 , GLU A:119 , PHE A:120
binding site for Mono-Saccharide NAG A 402 bound to ASN A 81
03
AC3
SOFTWARE
ASN A:165 , HOH A:505 , HOH A:512 , SER C:219 , PRO C:221 , TRP C:222
binding site for Poly-Saccharide residues NAG A 403 through BMA A 405 bound to ASN A 165
04
AC4
SOFTWARE
SER A:45 , ASN A:285 , VAL A:297 , GLU B:69
binding site for Poly-Saccharide residues NAG A 406 through NAG A 407 bound to ASN A 285
05
AC5
SOFTWARE
ASN C:38 , HOH C:614
binding site for Mono-Saccharide NAG C 501 bound to ASN C 38
06
AC6
SOFTWARE
ASN C:165 , THR C:167 , HOH C:605 , HOH C:608 , SER E:219 , PRO E:221 , TRP E:222
binding site for Poly-Saccharide residues NAG C 502 through MAN C 505 bound to ASN C 165
07
AC7
SOFTWARE
SER C:45 , ASN C:285 , VAL C:297 , GLU D:69
binding site for Poly-Saccharide residues NAG C 506 through NAG C 507 bound to ASN C 285
08
AC8
SOFTWARE
ASN E:38 , THR E:318 , HOH E:606 , HOH E:648 , LEU F:52
binding site for Mono-Saccharide NAG E 501 bound to ASN E 38
09
AC9
SOFTWARE
ASN E:81 , PHE E:120 , ILE E:121 , THR E:122
binding site for Poly-Saccharide residues NAG E 508 through NAG E 509 bound to ASN E 81
10
AD1
SOFTWARE
SER A:219 , PRO A:221 , TRP A:222 , ASN E:165 , THR E:167 , HOH E:637 , HOH E:655
binding site for Poly-Saccharide residues NAG E 502 through MAN E 505 bound to ASN E 165
11
AD2
SOFTWARE
SER E:45 , ASN E:285 , VAL E:297 , HOH E:601 , HOH E:611
binding site for Poly-Saccharide residues NAG E 506 through NAG E 507 bound to ASN E 285
12
AD3
SOFTWARE
ALA F:147 , GLU F:150 , ASN F:154 , HOH F:302
binding site for Mono-Saccharide NAG F 201 bound to ASN F 154
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (506 KB)
Header - Asym.Unit
Biol.Unit 1 (169 KB)
Header - Biol.Unit 1
Biol.Unit 2 (168 KB)
Header - Biol.Unit 2
Biol.Unit 3 (168 KB)
Header - Biol.Unit 3
Biol.Unit 4 (493 KB)
Header - Biol.Unit 4
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