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5VB8
Asym. Unit
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Asym.Unit (117 KB)
Biol.Unit 1 (434 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE NAVAB VOLTAGE-GATED SODIUM CHANNEL IN AN OPEN STATE
Authors
:
M. J. Lenaeus, W. A. Catterall
Date
:
28 Mar 17 (Deposition) - 05 Apr 17 (Release) - 19 Apr 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.85
Chains
:
Asym. Unit : A
Biol. Unit 1: A (4x)
Keywords
:
Voltage-Gated Sodium Channel, Transport Protein
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Reference
:
M. J. Lenaeus, T. M. Gamal El-Din, C. Ing, K. Ramanadane, R. Pomes, N. Zheng, W. A. Catterall
Structures Of Closed And Open States Of A Voltage-Gated Sodium Channel.
Proc. Natl. Acad. Sci. V. 114 E3051 2017 U. S. A.
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Hetero Components
(3, 6)
Info
All Hetero Components
1a: SODIUM ION (NAa)
2a: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4a)
2b: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4b)
2c: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4c)
2d: 1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSP... (PX4d)
3a: SULFATE ION (SO4a)
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No.
Name
Count
Type
Full Name
1
NA
1
Ligand/Ion
SODIUM ION
2
PX4
4
Ligand/Ion
1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
3
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(5, 5)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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Residues
Description
1
AC1
SOFTWARE
ILE A:1097 , TYR A:1191 , TYR A:1193 , ALA A:1194 , VAL A:1196 , HOH A:1410
binding site for residue PX4 A 1302
2
AC2
SOFTWARE
GLY A:1164 , GLU A:1165 , PHE A:1167 , TYR A:1168 , MET A:1188 , PRO A:1192 , TRP A:1195 , PX4 A:1304 , HOH A:1401
binding site for residue PX4 A 1303
3
AC3
SOFTWARE
ILE A:1027 , GLY A:1030 , SER A:1034 , THR A:1036 , THR A:1138 , TYR A:1142 , THR A:1162 , GLY A:1164 , PX4 A:1303
binding site for residue PX4 A 1304
4
AC4
SOFTWARE
PRO A:1075 , TRP A:1076 , SER A:1121
binding site for residue PX4 A 1305
5
AC5
SOFTWARE
PHE A:1156 , PRO A:1157 , GLU A:1158 , TRP A:1159
binding site for residue SO4 A 1306
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SAPs(SNPs)/Variants
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