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5UU9
Asym. Unit
Info
Asym.Unit (120 KB)
Biol.Unit 1 (113 KB)
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(1)
Title
:
TETRAGONAL THERMOLYSIN CRYOCOOLED TO 100 K WITH 40% XYLOSE AS CRYOPROTECTANT
Authors
:
D. H. Juers
Date
:
16 Feb 17 (Deposition) - 08 Mar 17 (Release) - 08 Mar 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Zinc Protease, Alpha/Beta, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. H. Juers, C. A. Farley, C. Saxby, R. Cotter, J. Cahn, C. Holton-Burke
Tetragonal Thermolysin Cryocooled To 100 K With 40% Xylose As Cryoprotectant
To Be Published
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Hetero Components
(4, 16)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
2a: DIMETHYL SULFOXIDE (DMSa)
3a: BETA-D-XYLOPYRANOSE (XYPa)
3b: BETA-D-XYLOPYRANOSE (XYPb)
3c: BETA-D-XYLOPYRANOSE (XYPc)
3d: BETA-D-XYLOPYRANOSE (XYPd)
3e: BETA-D-XYLOPYRANOSE (XYPe)
3f: BETA-D-XYLOPYRANOSE (XYPf)
3g: BETA-D-XYLOPYRANOSE (XYPg)
3h: BETA-D-XYLOPYRANOSE (XYPh)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
4c: ZINC ION (ZNc)
4d: ZINC ION (ZNd)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CA
3
Ligand/Ion
CALCIUM ION
2
DMS
1
Ligand/Ion
DIMETHYL SULFOXIDE
3
XYP
8
Ligand/Ion
BETA-D-XYLOPYRANOSE
4
ZN
4
Ligand/Ion
ZINC ION
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASP A:138 , GLU A:177 , ASP A:185 , GLU A:187 , GLU A:190 , ZN A:402 , HOH A:642
binding site for residue CA A 401
02
AC2
SOFTWARE
GLU A:177 , ASN A:183 , ASP A:185 , GLU A:190 , CA A:401 , HOH A:538 , HOH A:568
binding site for residue ZN A 402
03
AC3
SOFTWARE
ASP A:57 , ASP A:59 , GLN A:61 , HOH A:591 , HOH A:629 , HOH A:788
binding site for residue CA A 403
04
AC4
SOFTWARE
TYR A:193 , THR A:194 , ILE A:197 , ASP A:200 , HOH A:546 , HOH A:779
binding site for residue CA A 404
05
AC5
SOFTWARE
HIS A:142 , GLU A:143 , HIS A:146 , GLU A:166 , ZN A:406 , ZN A:407 , HOH A:731
binding site for residue ZN A 405
06
AC6
SOFTWARE
TYR A:157 , GLU A:166 , HIS A:231 , ZN A:405 , ZN A:407 , HOH A:710 , HOH A:731 , HOH A:783 , HOH A:821
binding site for residue ZN A 406
07
AC7
SOFTWARE
GLU A:143 , ZN A:405 , ZN A:406 , HOH A:598 , HOH A:684 , HOH A:731 , HOH A:821
binding site for residue ZN A 407
08
AC8
SOFTWARE
TYR A:274 , GLN A:283 , ALA A:287 , HOH A:610 , HOH A:656 , HOH A:760
binding site for residue XYP A 408
09
AC9
SOFTWARE
ASN A:159 , GLU A:160 , ARG A:220 , TYR A:221 , THR A:222 , GLY A:228 , ASN A:233 , HOH A:539 , HOH A:626
binding site for residue XYP A 409
10
AD1
SOFTWARE
ASP A:150 , TRP A:186 , SER A:206 , TYR A:242 , HOH A:509 , HOH A:513 , HOH A:520 , HOH A:616 , HOH A:754
binding site for residue XYP A 410
11
AD2
SOFTWARE
HIS A:216 , SER A:218 , HOH A:502 , HOH A:507 , HOH A:543 , HOH A:602 , HOH A:775
binding site for residue XYP A 411
12
AD3
SOFTWARE
LEU A:175 , PHE A:178 , TYR A:179 , ARG A:260 , ASP A:261 , GLN A:273 , HOH A:504 , HOH A:537 , HOH A:732
binding site for residue XYP A 412
13
AD4
SOFTWARE
ARG A:11 , GLY A:12 , VAL A:13 , GLY A:15 , PHE A:63 , SER A:65 , ALA A:68 , HOH A:536 , HOH A:713
binding site for residue XYP A 413
14
AD5
SOFTWARE
ILE A:1 , TYR A:29 , SER A:53 , LEU A:54 , ALA A:209 , GLY A:212 , HOH A:514
binding site for residue XYP A 414
15
AD6
SOFTWARE
ILE A:1 , THR A:2 , GLY A:3 , SER A:5 , GLN A:31 , ASN A:33 , HOH A:751
binding site for residue XYP A 415
16
AD7
SOFTWARE
SER A:206 , LYS A:239 , HOH A:525 , HOH A:679 , HOH A:785
binding site for residue DMS A 416
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (120 KB)
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