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5UND
Biol. Unit 2
Info
Asym.Unit (212 KB)
Biol.Unit 1 (106 KB)
Biol.Unit 2 (98 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF CTCF(ZNF 4-10) WITH 28-MER DNA
Authors
:
J. R. Horton, X. Cheng
Date
:
30 Jan 17 (Deposition) - 24 May 17 (Release) - 14 Jun 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.55
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,C,D (1x)
Biol. Unit 2: B,E,F (1x)
Keywords
:
Transcription Factor Zinc Finger Protein-Dna Binding Insulator/Chromatin Architecture, Transcription-Dna Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Hashimoto, D. Wang, J. R. Horton, X. Zhang, V. G. Corces, X. Cheng
Structural Basis For The Versatile And Methylation-Dependen Binding Of Ctcf To Dna.
Mol. Cell V. 66 711 2017
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Hetero Components
(2, 5)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
1c: 1,2-ETHANEDIOL (EDOc)
1d: 1,2-ETHANEDIOL (EDOd)
1e: 1,2-ETHANEDIOL (EDOe)
1f: 1,2-ETHANEDIOL (EDOf)
2a: GLYCEROL (GOLa)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
3g: ZINC ION (ZNg)
3h: ZINC ION (ZNh)
3i: ZINC ION (ZNi)
3j: ZINC ION (ZNj)
3k: ZINC ION (ZNk)
3l: ZINC ION (ZNl)
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No.
Name
Count
Type
Full Name
1
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
2
GOL
1
Ligand/Ion
GLYCEROL
3
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(10, 10)
Info
All Sites
01: AC9 (SOFTWARE)
02: AD1 (SOFTWARE)
03: AD2 (SOFTWARE)
04: AD3 (SOFTWARE)
05: AD4 (SOFTWARE)
06: AD5 (SOFTWARE)
07: AD6 (SOFTWARE)
08: AD7 (SOFTWARE)
09: AD8 (SOFTWARE)
10: AD9 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC9
SOFTWARE
CYS B:353 , CYS B:356 , HIS B:369 , HIS B:373
binding site for residue ZN B 601
02
AD1
SOFTWARE
CYS B:381 , CYS B:384 , HIS B:397 , HIS B:401
binding site for residue ZN B 602
03
AD2
SOFTWARE
CYS B:409 , CYS B:412 , HIS B:425 , HIS B:430
binding site for residue ZN B 603
04
AD3
SOFTWARE
CYS B:439 , CYS B:442 , HIS B:455 , HIS B:460
binding site for residue ZN B 604
05
AD4
SOFTWARE
CYS B:469 , CYS B:472 , HIS B:485 , HIS B:489
binding site for residue ZN B 605
06
AD5
SOFTWARE
CYS B:412 , HIS B:425 , LYS B:429
binding site for residue EDO B 606
07
AD6
SOFTWARE
HIS B:441 , HIS B:460 , GLU B:478
binding site for residue GOL B 607
08
AD7
SOFTWARE
DT E:11 , DG F:19
binding site for residue EDO E 101
09
AD8
SOFTWARE
DG F:15
binding site for residue EDO F 101
10
AD9
SOFTWARE
DG F:14
binding site for residue EDO F 102
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SAPs(SNPs)/Variants
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Asymmetric Unit 1
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Asym.Unit (212 KB)
Header - Asym.Unit
Biol.Unit 1 (106 KB)
Header - Biol.Unit 1
Biol.Unit 2 (98 KB)
Header - Biol.Unit 2
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