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Asym. Unit
Info
Asym.Unit (232 KB)
Biol.Unit 1 (60 KB)
Biol.Unit 2 (58 KB)
Biol.Unit 3 (60 KB)
Biol.Unit 4 (60 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 4D IN COMPLEX WITH A TETRAFLUORANLINE COMPOUND
Authors
:
J. S. Sack
Date
:
06 Oct 16 (Deposition) - 28 Dec 16 (Release) - 28 Dec 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.16
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Biol. Unit 4: D (1x)
Keywords
:
Phosphodiesterase, Pde4D, Alternative Splicing, Camp, Cytoplasm, Cytoskeleton, Hydrolase, Membrane, Metal- Binding, Phosphoprotein, Hydrolase-Hydrolase Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Moslin, D. Gardner, J. Santella, Y. Zhang, J. V. Duncia, C. Liu, J. Lin, J. S. Tokarski, J. Strnad, J. Pedicord, J. Chen, Y. Blat, A. Zupa-Fernandez, L. Cheng, H. Sun, C. Chaudhry, C. Huang, C. D'Arienzo, J. S. Sack, J. K. Muckelbauer, C. Chang, J. Tredup, D. Xie N. Aranibar, J. R. Burke, P. H. Carter, D. S. Weinstein
Identification Of Imidazo[1, 2-B]Pyridazine Tyk2 Pseudokinas Ligands As Potent And Selective Allosteric Inhibitors Of Tyk2 Signalling
Medchemcomm 2016
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Hetero Components
(5, 23)
Info
All Hetero Components
1a: N-[(2R)-2,3-DIHYDROXY-2-METHYLPROP... (7DJa)
1b: N-[(2R)-2,3-DIHYDROXY-2-METHYLPROP... (7DJb)
1c: N-[(2R)-2,3-DIHYDROXY-2-METHYLPROP... (7DJc)
1d: N-[(2R)-2,3-DIHYDROXY-2-METHYLPROP... (7DJd)
2a: ETHANOL (EOHa)
2b: ETHANOL (EOHb)
2c: ETHANOL (EOHc)
2d: ETHANOL (EOHd)
2e: ETHANOL (EOHe)
2f: ETHANOL (EOHf)
2g: ETHANOL (EOHg)
2h: ETHANOL (EOHh)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
5a: ZINC ION (ZNa)
5b: ZINC ION (ZNb)
5c: ZINC ION (ZNc)
5d: ZINC ION (ZNd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
7DJ
4
Ligand/Ion
N-[(2R)-2,3-DIHYDROXY-2-METHYLPROPYL]-8-(METHYLAMINO)-6-[(2,3,5,6-TETRAFLUOROPHENYL)AMINO]IMIDAZO[1,2-B]PYRIDAZINE-3-CARBOXAMIDE
2
EOH
8
Ligand/Ion
ETHANOL
3
MG
4
Ligand/Ion
MAGNESIUM ION
4
SO4
3
Ligand/Ion
SULFATE ION
5
ZN
4
Ligand/Ion
ZINC ION
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Sites
(23, 23)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:330 , HIS A:366 , ASP A:367 , ASP A:484 , HOH A:901 , HOH A:974
binding site for residue ZN A 801
02
AC2
SOFTWARE
ASP A:367 , HOH A:901 , HOH A:902 , HOH A:955 , HOH A:963 , HOH A:987
binding site for residue MG A 802
03
AC3
SOFTWARE
HIS A:271 , VAL A:272 , PHE A:273 , ARG A:274 , LEU A:494 , GLN A:497
binding site for residue SO4 A 803
04
AC4
SOFTWARE
LYS A:428 , ASP A:432 , HOH B:818
binding site for residue EOH A 804
05
AC5
SOFTWARE
THR A:314 , HIS A:318 , GLU A:409 , PHE C:377 , THR C:381
binding site for residue EOH A 805
06
AC6
SOFTWARE
PHE A:404 , ARG A:423 , HOH A:972
binding site for residue EOH A 806
07
AC7
SOFTWARE
HIS A:326 , THR A:437 , MET A:439 , ASP A:484 , LEU A:485 , ASN A:487 , ILE A:502 , MET A:523 , GLN A:535 , PHE A:538 , HOH A:919 , HOH A:1024
binding site for residue 7DJ A 807
08
AC8
SOFTWARE
HIS B:330 , HIS B:366 , ASP B:367 , ASP B:484 , HOH B:812 , HOH B:854
binding site for residue ZN B 701
09
AC9
SOFTWARE
ASP B:367 , HOH B:812 , HOH B:814 , HOH B:816 , HOH B:826 , HOH B:856
binding site for residue MG B 702
10
AD1
SOFTWARE
HIS B:271 , VAL B:272 , PHE B:273 , ARG B:274 , GLN B:493 , LEU B:494 , GLN B:497
binding site for residue SO4 B 703
11
AD2
SOFTWARE
PRO B:522
binding site for residue EOH B 704
12
AD3
SOFTWARE
HIS B:318 , GLU B:409 , HOH B:830 , THR D:381
binding site for residue EOH B 705
13
AD4
SOFTWARE
HOH A:915 , LYS B:428 , ASP B:432
binding site for residue EOH B 706
14
AD5
SOFTWARE
THR B:437 , MET B:439 , ASP B:484 , LEU B:485 , ASN B:487 , ILE B:502 , MET B:523 , GLN B:535 , PHE B:538 , HOH B:806
binding site for residue 7DJ B 707
15
AD6
SOFTWARE
HIS C:330 , HIS C:366 , ASP C:367 , ASP C:484 , HOH C:814 , HOH C:868
binding site for residue ZN C 701
16
AD7
SOFTWARE
ASP C:367 , HOH C:814 , HOH C:820 , HOH C:826 , HOH C:842 , HOH C:871
binding site for residue MG C 702
17
AD8
SOFTWARE
HIS C:271 , VAL C:272 , PHE C:273 , ARG C:274 , GLN C:493 , LEU C:494 , GLN C:497
binding site for residue SO4 C 703
18
AD9
SOFTWARE
LYS C:428 , ASP C:432 , HOH D:831
binding site for residue EOH C 704
19
AE1
SOFTWARE
THR C:437 , MET C:439 , ASP C:484 , LEU C:485 , ASN C:487 , ILE C:502 , PHE C:506 , MET C:523 , GLN C:535 , PHE C:538 , HOH C:801
binding site for residue 7DJ C 705
20
AE2
SOFTWARE
HIS D:330 , HIS D:366 , ASP D:367 , ASP D:484 , HOH D:801 , HOH D:867
binding site for residue ZN D 701
21
AE3
SOFTWARE
ASP D:367 , HOH D:801 , HOH D:806 , HOH D:835 , HOH D:849 , HOH D:891
binding site for residue MG D 702
22
AE4
SOFTWARE
HOH C:822 , LYS D:428 , ASP D:432
binding site for residue EOH D 703
23
AE5
SOFTWARE
THR D:437 , MET D:439 , ASP D:484 , LEU D:485 , ASN D:487 , ILE D:502 , PHE D:506 , MET D:523 , GLN D:535 , PHE D:538 , HOH D:805 , HOH D:941
binding site for residue 7DJ D 704
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SAPs(SNPs)/Variants
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Exons
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Pfam Domains
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Asym.Unit (232 KB)
Header - Asym.Unit
Biol.Unit 1 (60 KB)
Header - Biol.Unit 1
Biol.Unit 2 (58 KB)
Header - Biol.Unit 2
Biol.Unit 3 (60 KB)
Header - Biol.Unit 3
Biol.Unit 4 (60 KB)
Header - Biol.Unit 4
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