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5TH3
Biol. Unit 1
Info
Asym.Unit (433 KB)
Biol.Unit 1 (212 KB)
Biol.Unit 2 (214 KB)
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(1)
Title
:
RESTRICTION/MODIFICATION SYSTEM-TYPE II R.SWAI CLEAVED DNA COMPLEX
Authors
:
B. W. Shen, B. L. Stoddard
Date
:
29 Sep 16 (Deposition) - 21 Dec 16 (Release) - 21 Jun 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.33
Chains
:
Asym. Unit : A,B,C,D,H,I,J,K,h,i,j,k
Biol. Unit 1: A,B,H,I,h,i (1x)
Biol. Unit 2: C,D,J,K,j,k (1x)
Keywords
:
I-Swai, Cleaved Dna Complex, R/M System, Dna Binding Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
B. W. Shen, D. F. Heiter, K. D. Lunnen, G. G. Wilson, B. L. Stoddard
Dna Recognition By The Swai Restriction Endonuclease Involves Unusual Distortion Of An 8 Base Pair A:T-Rich Target.
Nucleic Acids Res. V. 45 1516 2017
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Hetero Components
(3, 13)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: 1,2-ETHANEDIOL (EDOa)
2b: 1,2-ETHANEDIOL (EDOb)
2c: 1,2-ETHANEDIOL (EDOc)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
3f: MAGNESIUM ION (MGf)
4a: SELENOMETHIONINE (MSEa)
4b: SELENOMETHIONINE (MSEb)
4c: SELENOMETHIONINE (MSEc)
4d: SELENOMETHIONINE (MSEd)
4e: SELENOMETHIONINE (MSEe)
4f: SELENOMETHIONINE (MSEf)
4g: SELENOMETHIONINE (MSEg)
4h: SELENOMETHIONINE (MSEh)
4i: SELENOMETHIONINE (MSEi)
4j: SELENOMETHIONINE (MSEj)
4k: SELENOMETHIONINE (MSEk)
4l: SELENOMETHIONINE (MSEl)
4m: SELENOMETHIONINE (MSEm)
4n: SELENOMETHIONINE (MSEn)
4o: SELENOMETHIONINE (MSEo)
4p: SELENOMETHIONINE (MSEp)
4q: SELENOMETHIONINE (MSEq)
4r: SELENOMETHIONINE (MSEr)
4s: SELENOMETHIONINE (MSEs)
4t: SELENOMETHIONINE (MSEt)
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No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
EDO
2
Ligand/Ion
1,2-ETHANEDIOL
3
MG
-1
Ligand/Ion
MAGNESIUM ION
4
MSE
10
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AD1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:76 , ASP A:93 , PHE A:94 , MG A:302 , HOH A:414 , HOH A:424 , DA h:25
binding site for residue MG A 301
2
AC2
SOFTWARE
ASP A:76 , ASP A:93 , MG A:301 , HOH A:424 , DT H:14 , DA h:25 , HOH h:104
binding site for residue MG A 302
3
AC3
SOFTWARE
GLY A:65 , ALA A:66 , PRO A:67 , TYR D:61 , ASP D:62
binding site for residue EDO A 303
4
AC4
SOFTWARE
ASP B:76 , ASP B:93 , PHE B:94 , HOH B:406 , HOH B:417 , DA i:25 , HOH i:202
binding site for residue MG B 301
5
AC5
SOFTWARE
PHE B:141 , TYR B:148
binding site for residue ACT B 302
6
AD1
SOFTWARE
DC I:7 , DG I:8 , DG I:9 , DG h:29
binding site for residue EDO I 101
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SAPs(SNPs)/Variants
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Exons
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SCOP Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (433 KB)
Header - Asym.Unit
Biol.Unit 1 (212 KB)
Header - Biol.Unit 1
Biol.Unit 2 (214 KB)
Header - Biol.Unit 2
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