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5TCJ
Biol. Unit 1
Info
Asym.Unit (820 KB)
Biol.Unit 1 (410 KB)
Biol.Unit 2 (409 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TRYPTOPHAN SYNTHASE FROM M. TUBERCULOSIS - AMINOACRYLATE AND BRD4592-BOUND FORM
Authors
:
K. Michalska, N. Maltseva, R. Jedrzejczak, S. Wellington, P. P. Nag, S. S. L. Schreiber, D. T. Hung, A. Joachimiak, Center For Structural G Of Infectious Diseases (Csgid)
Date
:
15 Sep 16 (Deposition) - 31 May 17 (Release) - 31 May 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Plp, Heterotetramer, Amino Acid Biosynthesis, Substrate Channeling, Allostery, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Michalska, N. Maltseva, R. Jedrzejczak, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
Crystal Structure Of Tryptophan Synthase From M. Tuberculosis - Ligand-Free Form
To Be Published
[
close entry info
]
Hetero Components
(4, 15)
Info
All Hetero Components
1a: (2R,3S,4R)-3-(2'-FLUORO[1,1'-BIPHE... (79Va)
1b: (2R,3S,4R)-3-(2'-FLUORO[1,1'-BIPHE... (79Vb)
1c: (2R,3S,4R)-3-(2'-FLUORO[1,1'-BIPHE... (79Vc)
1d: (2R,3S,4R)-3-(2'-FLUORO[1,1'-BIPHE... (79Vd)
2a: CESIUM ION (CSa)
2b: CESIUM ION (CSb)
2c: CESIUM ION (CSc)
2d: CESIUM ION (CSd)
2e: CESIUM ION (CSe)
2f: CESIUM ION (CSf)
2g: CESIUM ION (CSg)
2h: CESIUM ION (CSh)
2i: CESIUM ION (CSi)
3a: FORMIC ACID (FMTa)
3b: FORMIC ACID (FMTb)
3c: FORMIC ACID (FMTc)
3d: FORMIC ACID (FMTd)
3e: FORMIC ACID (FMTe)
3f: FORMIC ACID (FMTf)
3g: FORMIC ACID (FMTg)
3h: FORMIC ACID (FMTh)
3i: FORMIC ACID (FMTi)
3j: FORMIC ACID (FMTj)
3k: FORMIC ACID (FMTk)
3l: FORMIC ACID (FMTl)
3m: FORMIC ACID (FMTm)
3n: FORMIC ACID (FMTn)
3o: FORMIC ACID (FMTo)
3p: FORMIC ACID (FMTp)
3q: FORMIC ACID (FMTq)
3r: FORMIC ACID (FMTr)
3s: FORMIC ACID (FMTs)
3t: FORMIC ACID (FMTt)
3u: FORMIC ACID (FMTu)
3v: FORMIC ACID (FMTv)
4a: MALONATE ION (MLIa)
4b: MALONATE ION (MLIb)
4c: MALONATE ION (MLIc)
4d: MALONATE ION (MLId)
5a: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPH... (P1Ta)
5b: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPH... (P1Tb)
5c: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPH... (P1Tc)
5d: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPH... (P1Td)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
79V
2
Ligand/Ion
(2R,3S,4R)-3-(2'-FLUORO[1,1'-BIPHENYL]-4-YL)-4-(HYDROXYMETHYL)AZETIDINE-2-CARBONITRILE
2
CS
-1
Ligand/Ion
CESIUM ION
3
FMT
9
Ligand/Ion
FORMIC ACID
4
MLI
2
Ligand/Ion
MALONATE ION
5
P1T
2
Ligand/Ion
2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID
[
close Hetero Component info
]
Sites
(25, 25)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD4 (SOFTWARE)
13: AE1 (SOFTWARE)
14: AE5 (SOFTWARE)
15: AE9 (SOFTWARE)
16: AF3 (SOFTWARE)
17: AF8 (SOFTWARE)
18: AF9 (SOFTWARE)
19: AG1 (SOFTWARE)
20: AG2 (SOFTWARE)
21: AG3 (SOFTWARE)
22: AG4 (SOFTWARE)
23: AG5 (SOFTWARE)
24: AG6 (SOFTWARE)
25: AG7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:181 , GLY A:217 , LEU A:218 , GLY A:219 , VAL A:220 , ILE A:237 , GLY A:239 , SER A:240 , FMT A:302
binding site for residue MLI A 301
02
AC2
SOFTWARE
TYR A:30 , GLU A:57 , TYR A:181 , ILE A:237 , MLI A:301
binding site for residue FMT A 302
03
AC3
SOFTWARE
HIS B:100 , LYS B:101 , THR B:124 , GLY B:125 , ALA B:126 , GLY B:127 , GLN B:128 , HIS B:129 , LEU B:180 , THR B:204 , CYS B:244 , GLY B:246 , GLY B:247 , GLY B:248 , SER B:249 , ASN B:250 , GLY B:317 , GLU B:364 , SER B:390 , GLY B:391 , HOH B:626
binding site for residue P1T B 501
04
AC4
SOFTWARE
GLY B:246 , ALA B:282 , THR B:284 , TYR B:320 , GLY B:322 , HOH B:613
binding site for residue CS B 502
05
AC5
SOFTWARE
GLY B:67 , PRO B:69 , HOH B:738 , HOH B:739 , GLY D:67 , PRO D:69
binding site for residue CS B 503
06
AC6
SOFTWARE
LYS B:402 , TRP B:403 , LYS H:402 , TRP H:403
binding site for residue CS B 504
07
AC7
SOFTWARE
ASP A:64 , GLY A:66 , MET A:67 , ASP A:136 , PRO B:31 , LEU B:34 , PHE B:188 , PHE B:202 , PRO B:208 , HIS B:294 , GLY B:295 , HOH B:661
binding site for residue 79V B 505
08
AC8
SOFTWARE
LYS B:47 , GLU B:48 , HOH B:658
binding site for residue FMT B 506
09
AC9
SOFTWARE
ARG B:355 , LEU D:165
binding site for residue FMT B 507
10
AD1
SOFTWARE
GLN B:80 , HOH B:709 , ARG F:119
binding site for residue FMT B 508
11
AD2
SOFTWARE
LEU B:165 , ARG D:355
binding site for residue FMT B 509
12
AD4
SOFTWARE
HOH A:418 , ARG G:223 , GLY G:258 , ALA G:262 , HOH G:447
binding site for residue FMT G 302
13
AE1
SOFTWARE
ARG D:119 , VAL D:145 , HOH D:704 , ARG H:77 , GLN H:80 , HOH H:700
binding site for residue FMT H 504
14
AE5
SOFTWARE
ASN D:194 , SER H:84
binding site for residue FMT H 508
15
AE9
SOFTWARE
HOH D:721 , LEU F:142
binding site for residue CS F 503
16
AF3
SOFTWARE
GLY D:141 , LEU D:142 , ASP D:143 , CS D:503 , GLY F:141 , LEU F:142 , ASP F:143
binding site for residue FMT F 506
17
AF8
SOFTWARE
TYR C:181 , GLY C:217 , GLY C:219 , ILE C:237 , GLY C:239 , SER C:240
binding site for residue MLI C 301
18
AF9
SOFTWARE
GLN C:144 , SER D:23
binding site for residue FMT C 302
19
AG1
SOFTWARE
HIS D:100 , LYS D:101 , THR D:124 , GLY D:125 , ALA D:126 , GLY D:127 , GLN D:128 , HIS D:129 , THR D:204 , CYS D:244 , GLY D:246 , GLY D:247 , GLY D:248 , SER D:249 , ASN D:250 , GLY D:317 , LEU D:318 , GLU D:364 , SER D:390 , GLY D:391 , HOH D:644 , HOH D:658
binding site for residue P1T D 501
20
AG2
SOFTWARE
GLY D:246 , ALA D:282 , THR D:284 , TYR D:320 , GLY D:322 , HOH D:648 , HOH D:685
binding site for residue CS D 502
21
AG3
SOFTWARE
LEU D:142 , FMT F:506 , HOH F:700
binding site for residue CS D 503
22
AG4
SOFTWARE
ASP C:64 , GLY C:66 , MET C:67 , LEU D:34 , PHE D:188 , PHE D:202 , PRO D:208 , HIS D:294 , GLY D:295
binding site for residue 79V D 504
23
AG5
SOFTWARE
LYS D:47 , GLU D:48
binding site for residue FMT D 505
24
AG6
SOFTWARE
HIS D:312 , SER D:313 , ASP D:319
binding site for residue FMT D 506
25
AG7
SOFTWARE
ALA D:36 , GLU D:40
binding site for residue FMT D 507
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(, 0)
Info
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
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Pfam Domains
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Asym.Unit (820 KB)
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Header - Biol.Unit 1
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