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5TCH
Asym. Unit
Info
Asym.Unit (823 KB)
Biol.Unit 1 (412 KB)
Biol.Unit 2 (411 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TRYPTOPHAN SYNTHASE FROM M. TUBERCULOSIS - LIGAND-FREE FORM, TRPA-G66V MUTANT
Authors
:
K. Michalska, N. Maltseva, R. Jedrzejczak, S. Wellington, P. P. Nag, S. S. L. Schreiber, D. T. Hung, A. Joachimiak, Center For Structural G Of Infectious Diseases (Csgid)
Date
:
15 Sep 16 (Deposition) - 31 May 17 (Release) - 31 May 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.35
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Plp, Heterotetramer, Amino Acid Biosynthesis, Substrate Channeling, Allostery, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Lyase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Michalska, N. Maltseva, R. Jedrzejczak, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
Crystal Structure Of Tryptophan Synthase From M. Tuberculosis - Ligand-Free Form
To Be Published
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Hetero Components
(3, 32)
Info
All Hetero Components
1a: FORMIC ACID (FMTa)
1b: FORMIC ACID (FMTb)
1c: FORMIC ACID (FMTc)
1d: FORMIC ACID (FMTd)
1e: FORMIC ACID (FMTe)
1f: FORMIC ACID (FMTf)
1g: FORMIC ACID (FMTg)
1h: FORMIC ACID (FMTh)
1i: FORMIC ACID (FMTi)
1j: FORMIC ACID (FMTj)
1k: FORMIC ACID (FMTk)
1l: FORMIC ACID (FMTl)
1m: FORMIC ACID (FMTm)
1n: FORMIC ACID (FMTn)
1o: FORMIC ACID (FMTo)
1p: FORMIC ACID (FMTp)
1q: FORMIC ACID (FMTq)
1r: FORMIC ACID (FMTr)
1s: FORMIC ACID (FMTs)
1t: FORMIC ACID (FMTt)
2a: (2S)-2-AMINO-6-[[3-HYDROXY-2-METHY... (LLPa)
2b: (2S)-2-AMINO-6-[[3-HYDROXY-2-METHY... (LLPb)
2c: (2S)-2-AMINO-6-[[3-HYDROXY-2-METHY... (LLPc)
2d: (2S)-2-AMINO-6-[[3-HYDROXY-2-METHY... (LLPd)
3a: MALONATE ION (MLIa)
3b: MALONATE ION (MLIb)
3c: MALONATE ION (MLIc)
3d: MALONATE ION (MLId)
3e: MALONATE ION (MLIe)
3f: MALONATE ION (MLIf)
3g: MALONATE ION (MLIg)
3h: MALONATE ION (MLIh)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FMT
20
Ligand/Ion
FORMIC ACID
2
LLP
4
Mod. Amino Acid
(2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL]METHYLIDENEAMINO]HEXANOIC ACID
3
MLI
8
Ligand/Ion
MALONATE ION
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Sites
(28, 28)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:181 , GLY A:217 , LEU A:218 , GLY A:219 , GLY A:239 , SER A:240 , FMT A:302 , HOH A:405 , HOH A:416
binding site for residue MLI A 301
02
AC2
SOFTWARE
TYR A:30 , GLU A:57 , MET A:106 , TYR A:181 , ILE A:237 , MLI A:301
binding site for residue FMT A 302
03
AC3
SOFTWARE
THR B:124 , GLY B:125 , ALA B:126 , GLN B:128 , HIS B:129 , LEU B:180 , ALA B:316
binding site for residue MLI B 501
04
AC4
SOFTWARE
LYS B:47 , GLU B:48
binding site for residue FMT B 502
05
AC5
SOFTWARE
ARG B:265 , ASP B:337 , GLU B:378
binding site for residue FMT B 503
06
AC6
SOFTWARE
GLN A:144 , SER B:23 , TYR B:29
binding site for residue FMT B 504
07
AC7
SOFTWARE
TYR G:181 , GLY G:217 , GLY G:219 , GLY G:239 , SER G:240 , FMT G:302 , HOH G:406
binding site for residue MLI G 301
08
AC8
SOFTWARE
TYR G:30 , GLU G:57 , MET G:106 , TYR G:181 , MLI G:301
binding site for residue FMT G 302
09
AC9
SOFTWARE
GLN G:144 , SER H:23 , TYR H:29
binding site for residue FMT G 303
10
AD1
SOFTWARE
THR H:124 , GLY H:125 , ALA H:126 , GLN H:128 , HIS H:129 , LEU H:180
binding site for residue MLI H 501
11
AD2
SOFTWARE
LYS H:47 , GLU H:48 , ARG H:114 , HOH H:703
binding site for residue FMT H 502
12
AD3
SOFTWARE
LYS B:402 , GLY B:405 , GLY B:408 , TRP H:403
binding site for residue FMT H 503
13
AD4
SOFTWARE
ASP H:337 , GLU H:378
binding site for residue FMT H 504
14
AD5
SOFTWARE
HOH B:628 , ARG D:164 , HOH D:605 , ARG H:355 , PHE H:404 , HOH H:630
binding site for residue FMT H 505
15
AD6
SOFTWARE
TYR E:181 , GLY E:217 , GLY E:219 , GLY E:239 , SER E:240 , FMT E:303
binding site for residue MLI E 301
16
AD7
SOFTWARE
GLN E:144
binding site for residue FMT E 302
17
AD8
SOFTWARE
TYR E:30 , GLU E:57 , ILE E:72 , MET E:106 , TYR E:181 , MLI E:301
binding site for residue FMT E 303
18
AD9
SOFTWARE
LLP F:101 , THR F:124 , GLY F:125 , ALA F:126 , GLN F:128 , HIS F:129 , LEU F:180 , ALA F:316
binding site for residue MLI F 501
19
AE1
SOFTWARE
LYS F:47 , GLU F:48 , ARG F:114
binding site for residue FMT F 502
20
AE2
SOFTWARE
SER D:84 , ARG F:236
binding site for residue FMT F 503
21
AE3
SOFTWARE
TYR C:181 , GLY C:217 , GLY C:219 , GLY C:239 , SER C:240
binding site for residue MLI C 301
22
AE4
SOFTWARE
GLU C:57 , TYR C:181 , ILE C:237
binding site for residue FMT C 302
23
AE5
SOFTWARE
THR D:124 , GLY D:125 , ALA D:126 , GLN D:128 , HIS D:129 , LEU D:180 , ALA D:316 , HOH D:653 , HOH D:689
binding site for residue MLI D 501
24
AE6
SOFTWARE
ALA D:36 , GLU D:40 , ALA D:195 , ASP D:196
binding site for residue FMT D 502
25
AE7
SOFTWARE
GLU D:48 , ARG D:114
binding site for residue FMT D 503
26
AE8
SOFTWARE
HIS D:11 , LEU D:259 , ASP D:260 , ARG D:335
binding site for residue FMT D 504
27
AE9
SOFTWARE
GLN C:144 , SER D:23
binding site for residue FMT D 505
28
AF1
SOFTWARE
ARG D:119 , HOH D:667 , GLN H:80
binding site for residue FMT D 506
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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Exons
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (823 KB)
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Biol.Unit 1 (412 KB)
Header - Biol.Unit 1
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