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5TCG
Asym. Unit
Info
Asym.Unit (818 KB)
Biol.Unit 1 (410 KB)
Biol.Unit 2 (407 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF TRYPTOPHAN SYNTHASE FROM M. TUBERCULOSIS - AMINOACRYLATE-BOUND FORM
Authors
:
K. Michalska, N. Maltseva, R. Jedrzejczak, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
Date
:
15 Sep 16 (Deposition) - 31 May 17 (Release) - 31 May 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D (1x)
Biol. Unit 2: E,F,G,H (1x)
Keywords
:
Plp, Heterotetramer, Amino Acid Biosynthesis, Substrate Channeling, Allostery, Structural Genomics, Center For Structural Genomics Of Infectious Diseases, Csgid, Lyase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Michalska, N. Maltseva, R. Jedrzejczak, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
Crystal Structure Of Tryptophan Synthase From M. Tuberculosis - Ligand-Free Form
To Be Published
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Hetero Components
(4, 42)
Info
All Hetero Components
1a: CESIUM ION (CSa)
1b: CESIUM ION (CSb)
1c: CESIUM ION (CSc)
1d: CESIUM ION (CSd)
1e: CESIUM ION (CSe)
1f: CESIUM ION (CSf)
1g: CESIUM ION (CSg)
1h: CESIUM ION (CSh)
1i: CESIUM ION (CSi)
2a: FORMIC ACID (FMTa)
2b: FORMIC ACID (FMTb)
2c: FORMIC ACID (FMTc)
2d: FORMIC ACID (FMTd)
2e: FORMIC ACID (FMTe)
2f: FORMIC ACID (FMTf)
2g: FORMIC ACID (FMTg)
2h: FORMIC ACID (FMTh)
2i: FORMIC ACID (FMTi)
2j: FORMIC ACID (FMTj)
2k: FORMIC ACID (FMTk)
2l: FORMIC ACID (FMTl)
2m: FORMIC ACID (FMTm)
2n: FORMIC ACID (FMTn)
2o: FORMIC ACID (FMTo)
2p: FORMIC ACID (FMTp)
2q: FORMIC ACID (FMTq)
2r: FORMIC ACID (FMTr)
2s: FORMIC ACID (FMTs)
2t: FORMIC ACID (FMTt)
2u: FORMIC ACID (FMTu)
2v: FORMIC ACID (FMTv)
2w: FORMIC ACID (FMTw)
2x: FORMIC ACID (FMTx)
2y: FORMIC ACID (FMTy)
3a: MALONATE ION (MLIa)
3b: MALONATE ION (MLIb)
3c: MALONATE ION (MLIc)
3d: MALONATE ION (MLId)
4a: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPH... (P1Ta)
4b: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPH... (P1Tb)
4c: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPH... (P1Tc)
4d: 2-[({3-HYDROXY-2-METHYL-5-[(PHOSPH... (P1Td)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CS
9
Ligand/Ion
CESIUM ION
2
FMT
25
Ligand/Ion
FORMIC ACID
3
MLI
4
Ligand/Ion
MALONATE ION
4
P1T
4
Ligand/Ion
2-[({3-HYDROXY-2-METHYL-5-[(PHOSPHONOOXY)METHYL]PYRIDIN-4-YL}METHYL)AMINO]ACRYLIC ACID
[
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Sites
(42, 42)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
26: AE8 (SOFTWARE)
27: AE9 (SOFTWARE)
28: AF1 (SOFTWARE)
29: AF2 (SOFTWARE)
30: AF3 (SOFTWARE)
31: AF4 (SOFTWARE)
32: AF5 (SOFTWARE)
33: AF6 (SOFTWARE)
34: AF7 (SOFTWARE)
35: AF8 (SOFTWARE)
36: AF9 (SOFTWARE)
37: AG1 (SOFTWARE)
38: AG2 (SOFTWARE)
39: AG3 (SOFTWARE)
40: AG4 (SOFTWARE)
41: AG5 (SOFTWARE)
42: AG6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
TYR A:181 , GLY A:217 , LEU A:218 , GLY A:219 , ILE A:237 , GLY A:239 , SER A:240
binding site for residue MLI A 301
02
AC2
SOFTWARE
TYR A:30 , GLU A:57 , TYR A:181 , ILE A:237
binding site for residue FMT A 302
03
AC3
SOFTWARE
HIS B:100 , LYS B:101 , THR B:124 , GLY B:125 , ALA B:126 , GLY B:127 , GLN B:128 , HIS B:129 , THR B:204 , CYS B:244 , GLY B:246 , GLY B:247 , GLY B:248 , SER B:249 , ASN B:250 , GLY B:317 , GLU B:364 , SER B:390 , GLY B:391 , HOH B:639
binding site for residue P1T B 501
04
AC4
SOFTWARE
GLY B:246 , ALA B:282 , THR B:284 , TYR B:320 , GLY B:322 , HOH B:644
binding site for residue CS B 502
05
AC5
SOFTWARE
LYS B:402 , TRP B:403 , LYS H:402 , TRP H:403
binding site for residue CS B 503
06
AC6
SOFTWARE
LYS B:47 , GLU B:48 , ARG B:114 , HOH B:693
binding site for residue FMT B 504
07
AC7
SOFTWARE
ARG B:355 , PHE B:404 , LEU D:165
binding site for residue FMT B 505
08
AC8
SOFTWARE
GLN B:80 , HOH B:730 , ARG F:119 , VAL F:145
binding site for residue FMT B 506
09
AC9
SOFTWARE
LEU B:165 , ARG D:355
binding site for residue FMT B 507
10
AD1
SOFTWARE
GLN B:80 , SER B:84 , ASP F:190 , ASN F:194 , HOH F:619
binding site for residue FMT B 508
11
AD2
SOFTWARE
TYR G:181 , GLY G:217 , LEU G:218 , GLY G:219 , GLY G:239 , SER G:240 , FMT G:303 , HOH G:415
binding site for residue MLI G 301
12
AD3
SOFTWARE
ARG G:223
binding site for residue FMT G 302
13
AD4
SOFTWARE
GLU G:57 , MET G:106 , TYR G:181 , ILE G:237 , MLI G:301
binding site for residue FMT G 303
14
AD5
SOFTWARE
ARG C:85 , HIS G:152 , HOH G:424
binding site for residue FMT G 304
15
AD6
SOFTWARE
HIS H:100 , LYS H:101 , THR H:124 , GLY H:125 , ALA H:126 , GLY H:127 , GLN H:128 , HIS H:129 , THR H:204 , CYS H:244 , GLY H:246 , GLY H:247 , GLY H:248 , SER H:249 , ASN H:250 , GLY H:317 , GLU H:364 , SER H:390 , HOH H:657
binding site for residue P1T H 501
16
AD7
SOFTWARE
GLY H:246 , ALA H:282 , THR H:284 , TYR H:320 , GLY H:322 , HOH H:621
binding site for residue CS H 502
17
AD8
SOFTWARE
ARG D:119 , ARG H:77 , GLN H:80 , HOH H:715
binding site for residue FMT H 503
18
AD9
SOFTWARE
LYS H:47 , GLU H:48 , ARG H:114 , HOH H:647
binding site for residue FMT H 504
19
AE1
SOFTWARE
HOH H:605 , HOH H:654
binding site for residue FMT H 505
20
AE2
SOFTWARE
LEU F:165 , ARG H:355 , PHE H:404
binding site for residue FMT H 506
21
AE3
SOFTWARE
ARG F:355 , LEU H:165
binding site for residue FMT H 507
22
AE4
SOFTWARE
ASN D:194 , SER H:84
binding site for residue FMT H 508
23
AE5
SOFTWARE
GLY H:20 , GLY H:24 , GLU H:332
binding site for residue FMT H 509
24
AE6
SOFTWARE
TYR E:181 , GLY E:217 , LEU E:218 , GLY E:219 , GLY E:239 , SER E:240
binding site for residue MLI E 301
25
AE7
SOFTWARE
HIS F:100 , LYS F:101 , THR F:124 , GLY F:125 , ALA F:126 , GLY F:127 , GLN F:128 , HIS F:129 , THR F:204 , CYS F:244 , GLY F:246 , GLY F:247 , GLY F:248 , SER F:249 , ASN F:250 , GLY F:317 , GLU F:364 , SER F:390 , GLY F:391 , HOH F:638
binding site for residue P1T F 501
26
AE8
SOFTWARE
GLY F:246 , ALA F:282 , THR F:284 , TYR F:320 , GLY F:322 , HOH F:627
binding site for residue CS F 502
27
AE9
SOFTWARE
LEU F:142
binding site for residue CS F 503
28
AF1
SOFTWARE
GLY F:67 , PRO F:69 , HOH F:735 , GLY H:67 , PRO H:69 , HOH H:780
binding site for residue CS F 504
29
AF2
SOFTWARE
GLY D:141 , LEU D:142 , ASP D:143 , CS D:503 , GLY F:141 , LEU F:142 , ASP F:143
binding site for residue FMT F 505
30
AF3
SOFTWARE
LYS F:47 , GLU F:48
binding site for residue FMT F 506
31
AF4
SOFTWARE
SER F:23
binding site for residue FMT F 507
32
AF5
SOFTWARE
ARG F:280 , HIS F:312 , SER F:313 , ILE F:314 , ASP F:343
binding site for residue FMT F 508
33
AF6
SOFTWARE
TYR C:181 , GLY C:217 , LEU C:218 , GLY C:219 , ILE C:237 , GLY C:239 , SER C:240 , FMT C:302
binding site for residue MLI C 301
34
AF7
SOFTWARE
TYR C:30 , GLU C:57 , ILE C:72 , MET C:106 , TYR C:181 , MLI C:301
binding site for residue FMT C 302
35
AF8
SOFTWARE
HIS D:100 , LYS D:101 , THR D:124 , GLY D:125 , ALA D:126 , GLY D:127 , GLN D:128 , HIS D:129 , THR D:204 , CYS D:244 , GLY D:246 , GLY D:247 , GLY D:248 , SER D:249 , ASN D:250 , GLY D:317 , GLU D:364 , SER D:390 , GLY D:391 , HOH D:630 , HOH D:678
binding site for residue P1T D 501
36
AF9
SOFTWARE
GLY D:246 , ALA D:282 , THR D:284 , TYR D:320 , GLY D:322 , HOH D:692
binding site for residue CS D 502
37
AG1
SOFTWARE
LEU D:142 , FMT F:505 , HOH F:704
binding site for residue CS D 503
38
AG2
SOFTWARE
GLY B:67 , PRO B:69 , HOH B:756 , HOH B:758 , GLY D:67 , PRO D:69
binding site for residue CS D 504
39
AG3
SOFTWARE
SER D:23
binding site for residue FMT D 505
40
AG4
SOFTWARE
LYS D:47 , GLU D:48 , HOH D:657
binding site for residue FMT D 506
41
AG5
SOFTWARE
HIS D:312 , SER D:313 , ASP D:319
binding site for residue FMT D 507
42
AG6
SOFTWARE
GLU D:40
binding site for residue FMT D 508
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
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[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asym.Unit (818 KB)
Header - Asym.Unit
Biol.Unit 1 (410 KB)
Header - Biol.Unit 1
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