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5T9J
Asym. Unit
Info
Asym.Unit (360 KB)
Biol.Unit 1 (211 KB)
Biol.Unit 2 (349 KB)
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Title
:
CRYSTAL STRUCTURE OF HUMAN GEN1 IN COMPLEX WITH HOLLIDAY JUNCTION DNA IN THE UPPER INTERFACE
Authors
:
S. -H. Lee, C. Biertumpfel
Date
:
09 Sep 16 (Deposition) - 21 Sep 16 (Release) - 21 Sep 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.00
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,C,D,E,F (1x)
Biol. Unit 2: A,B,C,D,E,F (1x)
Keywords
:
Protein-Dna Complex, Holliday Junction Resolvase, Structure-Specific Endonuclease, Dna Four-Way Junction, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. H. Lee, L. N. Princz, M. F. Klugel, B. Habermann, B. Pfander, C. Biertumpfel
Human Holliday Junction Resolvase Gen1 Uses A Chromodomain For Efficient Dna Recognition And Cleavage.
Elife V. 4 2015
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Hetero Components
(2, 17)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
1d: GLYCEROL (GOLd)
1e: GLYCEROL (GOLe)
1f: GLYCEROL (GOLf)
1g: GLYCEROL (GOLg)
1h: GLYCEROL (GOLh)
1i: GLYCEROL (GOLi)
1j: GLYCEROL (GOLj)
1k: GLYCEROL (GOLk)
1l: GLYCEROL (GOLl)
1m: GLYCEROL (GOLm)
1n: GLYCEROL (GOLn)
1o: GLYCEROL (GOLo)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
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No.
Name
Count
Type
Full Name
1
GOL
15
Ligand/Ion
GLYCEROL
2
MG
2
Ligand/Ion
MAGNESIUM ION
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:115 , HIS A:119 , GLU A:122 , GOL A:604
binding site for residue GOL A 601
02
AC2
SOFTWARE
PRO A:127 , TRP A:128
binding site for residue GOL A 602
03
AC3
SOFTWARE
ARG A:115 , GLN A:130 , GOL A:601
binding site for residue GOL A 604
04
AC4
SOFTWARE
THR A:64 , LYS A:69 , TYR A:382
binding site for residue GOL A 605
05
AC5
SOFTWARE
GLY A:146 , ASP A:149
binding site for residue GOL A 606
06
AC6
SOFTWARE
LYS A:374 , DG C:3 , DC C:4
binding site for residue GOL A 607
07
AC7
SOFTWARE
GLU A:75 , GLU A:134
binding site for residue MG A 608
08
AC8
SOFTWARE
ARG B:115 , HIS B:119 , GLU B:122
binding site for residue GOL B 601
09
AC9
SOFTWARE
PRO B:127 , TRP B:128 , LYS B:344 , ARG B:347
binding site for residue GOL B 602
10
AD1
SOFTWARE
ARG B:347 , TYR B:348 , TYR B:382 , GLU B:386
binding site for residue GOL B 603
11
AD2
SOFTWARE
THR B:26 , GLY B:146 , ASP B:149
binding site for residue GOL B 604
12
AD3
SOFTWARE
LYS A:50 , HIS A:109 , SER A:112 , ARG B:401
binding site for residue GOL B 605
13
AD4
SOFTWARE
GLU B:75 , GLU B:134 , ALA B:135
binding site for residue MG B 606
14
AD5
SOFTWARE
TYR A:62 , MET A:172 , DG C:3
binding site for residue GOL C 101
15
AD6
SOFTWARE
DT C:11 , DA E:10 , DG F:9
binding site for residue GOL C 102
16
AD7
SOFTWARE
DG C:10 , DA E:10 , DG E:11
binding site for residue GOL C 103
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asym.Unit (360 KB)
Header - Asym.Unit
Biol.Unit 1 (211 KB)
Header - Biol.Unit 1
Biol.Unit 2 (349 KB)
Header - Biol.Unit 2
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