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5NMI
Asym. Unit
Info
Asym.Unit (667 KB)
Biol.Unit 1 (648 KB)
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(1)
Title
:
CYTOCHROME BC1 BOUND TO THE INHIBITOR MJM170
Authors
:
N. J. Capper, S. V. Antonyuk, S. S. Hasnain
Date
:
05 Apr 17 (Deposition) - 14 Jun 17 (Release) - 14 Jun 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.50
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,N,O,P,Q,R,S,T,U,V,W,X
Biol. Unit 1: A,B,C,D,E,F,G,H,I,J,K,N,O,P,Q,R,S,T,U,V,W,X (1x)
Keywords
:
Membrane Protein, Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Mcphillie, Y. Zhou, K. El Bissati, J. Dubey, H. Lorenzi, M. Capper, A. K. Lukens, M. Hickman, S. Muench, S. K. Verma, C. R. Weber, K. Wheeler J. Gordon, J. Sanders, H. Moulton, K. Wang, T. K. Kim, Y. He, T. Santos, S. Woods, P. Lee, D. Donkin, E. Kim, L. Fraczek, J. Lykins, F. Esaa, F. Alibana-Clouser, S. Dovgin, L. Weiss, G. Brasseur, D. Wirth, M. Kent, L. Hood, B. Meunieur, C. W. Roberts, S. S. Hasnain, S. V. Antonyuk, C. Fishwick, R. Mcleod
New Paradigms For Understanding And Step Changes In Treatin Active And Chronic, Persistent Apicomplexan Infections.
Sci Rep V. 6 29179 2016
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Hetero Components
(6, 21)
Info
All Hetero Components
1a: CARDIOLIPIN (CDLa)
1b: CARDIOLIPIN (CDLb)
1c: CARDIOLIPIN (CDLc)
1d: CARDIOLIPIN (CDLd)
1e: CARDIOLIPIN (CDLe)
1f: CARDIOLIPIN (CDLf)
2a: FE2/S2 (INORGANIC) CLUSTER (FESa)
3a: HEME C (HECa)
3b: HEME C (HECb)
4a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
4b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
4c: PROTOPORPHYRIN IX CONTAINING FE (HEMc)
4d: PROTOPORPHYRIN IX CONTAINING FE (HEMd)
5a: (4AS)-2-METHYL-3-(4-PHENOXYPHENYL)... (MJMa)
5b: (4AS)-2-METHYL-3-(4-PHENOXYPHENYL)... (MJMb)
6a: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEa)
6b: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEb)
6c: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEc)
6d: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEd)
6e: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEe)
6f: 1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOE... (PEEf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CDL
6
Ligand/Ion
CARDIOLIPIN
2
FES
1
Ligand/Ion
FE2/S2 (INORGANIC) CLUSTER
3
HEC
2
Ligand/Ion
HEME C
4
HEM
4
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
5
MJM
2
Ligand/Ion
(4AS)-2-METHYL-3-(4-PHENOXYPHENYL)-5,6,7,8-TETRAHYDROQUINOLIN-4(4AH)-ONE
6
PEE
6
Ligand/Ion
1,2-DIOLEOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE
[
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Sites
(24, 24)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN C:44 , GLY C:48 , TYR C:55 , ARG C:80 , HIS C:83 , THR C:126 , GLY C:130 , LEU C:133 , PRO C:134 , PHE C:179 , HIS C:182 , PHE C:183 , PRO C:186
binding site for residue HEM C 501
02
AC2
SOFTWARE
TRP C:31 , GLY C:34 , LEU C:37 , PHE C:90 , LEU C:94 , HIS C:97 , VAL C:98 , ARG C:100 , SER C:106 , TRP C:113 , GLY C:116 , VAL C:117 , HIS C:196 , LEU C:197 , LEU C:200 , ASN C:206 , MJM C:503
binding site for residue HEM C 502
03
AC3
SOFTWARE
PHE C:18 , TRP C:31 , SER C:35 , ILE C:39 , LEU C:197 , SER C:205 , PHE C:220 , ASP C:228 , HEM C:502
binding site for residue MJM C 503
04
AC4
SOFTWARE
TRP C:30 , TYR C:95 , MET C:96 , TYR C:103 , TYR C:104 , MET C:316 , GLN C:322 , PHE C:325 , TRP C:326 , CDL C:506 , GLN F:72 , CYS G:44 , VAL G:48
binding site for residue PEE C 504
05
AC5
SOFTWARE
PHE A:336 , ARG A:436 , SER A:439 , MET C:11 , LYS C:12 , ASN C:15 , ASP C:20 , HIS C:221 , ILE C:229 , PEE E:502
binding site for residue CDL C 505
06
AC6
SOFTWARE
SER C:28 , SER C:29 , TRP C:30 , PEE C:504 , GLN F:72 , ARG G:40 , CYS G:44
binding site for residue CDL C 506
07
AC7
SOFTWARE
VAL D:32 , VAL D:36 , CYS D:37 , CYS D:40 , HIS D:41 , LEU D:109 , PRO D:110 , PRO D:111 , ILE D:116 , ARG D:120 , TYR D:126 , PHE D:153 , GLY D:159 , MET D:160 , PRO D:163
binding site for residue HEC D 501
08
AC8
SOFTWARE
LEU C:43 , ILE C:236 , HIS D:200 , MET D:204 , LYS D:207 , MET D:211 , LEU D:215 , TYR E:49 , ALA E:50 , ASN E:53 , VAL E:54 , GLN E:57 , ASP J:36
binding site for residue PEE D 502
09
AC9
SOFTWARE
SER C:29 , ASN C:32 , MET C:89 , LYS C:227 , LEU C:230 , GLY C:231 , TYR D:220 , LYS D:223 , ARG D:224 , LYS D:231 , MET F:70 , PRO G:27 , GLY G:33 , ASN G:36 , VAL G:37 , ARG G:40
binding site for residue CDL D 503
10
AD1
SOFTWARE
CYS E:139 , HIS E:141 , LEU E:142 , CYS E:158 , HIS E:161 , SER E:163
binding site for residue FES E 501
11
AD2
SOFTWARE
PHE A:442 , CDL C:505 , TYR E:37 , THR E:40 , THR E:44 , ARG J:15 , THR J:17 , PHE J:20
binding site for residue PEE E 502
12
AD3
SOFTWARE
SER P:29 , ASN P:32 , CDL P:407 , TYR Q:220 , LYS Q:223 , ARG Q:224 , GLY T:33 , ASN T:36 , ARG T:40
binding site for residue CDL P 401
13
AD4
SOFTWARE
GLN P:44 , ILE P:45 , GLY P:48 , LEU P:49 , ALA P:52 , TYR P:55 , ARG P:80 , HIS P:83 , ALA P:87 , GLY P:130 , LEU P:133 , PRO P:134 , HIS P:182 , PHE P:183 , PRO P:186
binding site for residue HEM P 402
14
AD5
SOFTWARE
TRP P:31 , GLY P:34 , LEU P:37 , PHE P:90 , LEU P:94 , HIS P:97 , VAL P:98 , ARG P:100 , SER P:106 , GLY P:116 , VAL P:117 , HIS P:196 , LEU P:197 , LEU P:200 , SER P:205 , ASN P:206 , MJM P:404
binding site for residue HEM P 403
15
AD6
SOFTWARE
PHE P:18 , ILE P:27 , HIS P:201 , SER P:205 , PHE P:220 , ASP P:228 , HEM P:403
binding site for residue MJM P 404
16
AD7
SOFTWARE
TRP P:30 , TYR P:95 , MET P:96 , TYR P:103 , TYR P:104 , MET P:316 , GLN P:322 , TRP P:326 , VAL P:329 , CDL P:407 , GLN S:72 , CYS T:44 , VAL T:48 , PHE T:52
binding site for residue PEE P 405
17
AD8
SOFTWARE
ASP N:333 , ARG N:436 , SER N:439 , ASN P:15 , ILE P:19 , HIS P:221 , ILE P:229 , PEE R:202
binding site for residue CDL P 406
18
AD9
SOFTWARE
SER P:28 , SER P:29 , TRP P:30 , CDL P:401 , PEE P:405 , GLN S:72 , ARG T:40 , THR T:41 , CYS T:44
binding site for residue CDL P 407
19
AE1
SOFTWARE
LEU P:43 , MET P:240 , HIS Q:200 , MET Q:204 , LYS Q:207 , TYR R:49 , ALA R:50 , ASN R:53 , VAL R:54 , GLN R:57
binding site for residue PEE R 201
20
AE2
SOFTWARE
CDL P:406 , MET Q:222 , TYR R:37 , THR R:40 , THR W:17 , PHE W:20
binding site for residue PEE R 202
21
AE3
SOFTWARE
VAL Q:32 , TYR Q:33 , VAL Q:36 , SER Q:38 , SER Q:39 , CYS Q:40 , HIS Q:41 , LEU Q:109 , PRO Q:111 , ILE Q:116 , ARG Q:120 , TYR Q:126 , GLY Q:159 , MET Q:160 , PRO Q:163
binding site for Di-peptide HEC Q 501 and CYS Q 37
22
AE4
SOFTWARE
VAL Q:36 , CYS Q:37 , SER Q:38 , SER Q:39 , HIS Q:41 , PRO Q:94 , LEU Q:109 , PRO Q:111 , ILE Q:116 , ARG Q:120 , TYR Q:126 , GLY Q:159 , MET Q:160 , PRO Q:163
binding site for Di-peptide HEC Q 501 and CYS Q 40
23
AE5
SOFTWARE
VAL Q:36 , CYS Q:37 , SER Q:38 , SER Q:39 , HIS Q:41 , PRO Q:94 , LEU Q:109 , PRO Q:111 , ILE Q:116 , ARG Q:120 , TYR Q:126 , GLY Q:159 , MET Q:160 , PRO Q:163
binding site for Di-peptide HEC Q 501 and CYS Q 40
24
AE6
SOFTWARE
VAL Q:32 , TYR Q:33 , VAL Q:36 , SER Q:38 , SER Q:39 , CYS Q:40 , HIS Q:41 , LEU Q:109 , PRO Q:111 , ILE Q:116 , ARG Q:120 , TYR Q:126 , GLY Q:159 , MET Q:160 , PRO Q:163
binding site for Di-peptide HEC Q 501 and CYS Q 37
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Info
all PFAM domains
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Sorry, no Info available
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