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5MK5
Asym. Unit
Info
Asym.Unit (117 KB)
Biol.Unit 1 (57 KB)
Biol.Unit 2 (56 KB)
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(1)
Title
:
STRUCTURES OF DHBN DOMAIN OF HUMAN BLM HELICASE
Authors
:
J. Shi, W. -F. Chen, B. Zhang, S. -H. Fan, X. Ai, N. -N. Liu, S. Rety, X. -G. X
Date
:
02 Dec 16 (Deposition) - 01 Mar 17 (Release) - 19 Apr 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.16
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Helicase Dimerization Alpha-Helix Motif, Hydrolase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. Shi, W. F. Chen, B. Zhang, S. H. Fan, X. Ai, N. N. Liu, S. Rety, X. G. Xi
A Helical Bundle In The N-Terminal Domain Of The Blm Helicase Mediates Dimer And Potentially Hexamer Formation.
J. Biol. Chem. V. 292 5909 2017
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Hetero Components
(2, 23)
Info
All Hetero Components
1a: IODIDE ION (IODa)
1b: IODIDE ION (IODb)
1c: IODIDE ION (IODc)
1d: IODIDE ION (IODd)
1e: IODIDE ION (IODe)
1f: IODIDE ION (IODf)
1g: IODIDE ION (IODg)
1h: IODIDE ION (IODh)
1i: IODIDE ION (IODi)
1j: IODIDE ION (IODj)
1k: IODIDE ION (IODk)
1l: IODIDE ION (IODl)
1m: IODIDE ION (IODm)
1n: IODIDE ION (IODn)
1o: IODIDE ION (IODo)
1p: IODIDE ION (IODp)
1q: IODIDE ION (IODq)
1r: IODIDE ION (IODr)
1s: IODIDE ION (IODs)
1t: IODIDE ION (IODt)
2a: POTASSIUM ION (Ka)
2b: POTASSIUM ION (Kb)
2c: POTASSIUM ION (Kc)
View:
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Label:
No.
Name
Count
Type
Full Name
1
IOD
20
Ligand/Ion
IODIDE ION
2
K
3
Ligand/Ion
POTASSIUM ION
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
LYS A:381
binding site for residue IOD A 502
02
AC2
SOFTWARE
ASP A:395
binding site for residue IOD A 503
03
AC3
SOFTWARE
GLN A:370 , GLU A:377
binding site for residue IOD A 504
04
AC4
SOFTWARE
LEU A:382
binding site for residue IOD A 505
05
AC5
SOFTWARE
GLU A:377 , ASP C:362 , HOH C:629
binding site for residue K A 506
06
AC6
SOFTWARE
ILE A:386 , LYS A:390
binding site for residue IOD B 501
07
AC7
SOFTWARE
HIS B:374 , LYS B:381
binding site for residue IOD B 502
08
AC8
SOFTWARE
ARG B:407 , HOH B:609 , HOH B:631
binding site for residue IOD B 504
09
AC9
SOFTWARE
LYS C:390 , HOH C:605
binding site for residue K C 501
10
AD1
SOFTWARE
HIS A:378 , HOH B:626 , ASP C:362
binding site for residue K C 502
11
AD2
SOFTWARE
LYS C:390 , ASP D:395
binding site for residue IOD C 503
12
AD3
SOFTWARE
GLU C:413
binding site for residue IOD C 507
13
AD4
SOFTWARE
ASP C:388 , ASP C:389
binding site for residue IOD C 508
14
AD5
SOFTWARE
ARG D:407 , HOH D:618
binding site for residue IOD D 501
15
AD6
SOFTWARE
HIS D:378
binding site for residue IOD D 502
16
AD7
SOFTWARE
GLU D:399 , GLN D:402 , GLN D:403
binding site for residue IOD D 503
17
AD8
SOFTWARE
GLN D:402
binding site for residue IOD D 504
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Asym.Unit (117 KB)
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