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5MFT
Asym. Unit
Info
Asym.Unit (578 KB)
Biol.Unit 1 (568 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF E. COLI AMINOPEPTIDASE N IN COMPLEX WITH 7-AMINO-1-BROMO-4-PHENYL-5,7,8,9-TETRAHYDROBENZOCYCLOHEPTEN-6-ONE
Authors
:
G. Peng, V. Olieric, A. G. Mcewen, C. Schmitt, S. Albrecht, J. Cavarelli
Date
:
18 Nov 16 (Deposition) - 19 Apr 17 (Release) - 19 Apr 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.59
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
M1 Aminopeptidase, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
G. Peng, A. G. Mcewen, V. Olieric, C. Schmitt, S. Albrecht, J. Cavarelli, C. Tarnus
Insight Into The Remarkable Affinity And Selectivity Of The Aminobenzosuberone Scaffold For The M1 Aminopeptidases Family Based On Structure Analysis.
Proteins 2017
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Hetero Components
(7, 25)
Info
All Hetero Components
1a: [(7~{S})-1-BROMANYL-6,6-BIS(OXIDAN... (7MFa)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
3a: DIMETHYL SULFOXIDE (DMSa)
3b: DIMETHYL SULFOXIDE (DMSb)
4a: GLYCEROL (GOLa)
4b: GLYCEROL (GOLb)
4c: GLYCEROL (GOLc)
4d: GLYCEROL (GOLd)
4e: GLYCEROL (GOLe)
4f: GLYCEROL (GOLf)
4g: GLYCEROL (GOLg)
4h: GLYCEROL (GOLh)
5a: MALONATE ION (MLIa)
5b: MALONATE ION (MLIb)
5c: MALONATE ION (MLIc)
5d: MALONATE ION (MLId)
5e: MALONATE ION (MLIe)
6a: SODIUM ION (NAa)
6b: SODIUM ION (NAb)
6c: SODIUM ION (NAc)
6d: SODIUM ION (NAd)
6e: SODIUM ION (NAe)
6f: SODIUM ION (NAf)
7a: ZINC ION (ZNa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
7MF
1
Ligand/Ion
[(7~{S})-1-BROMANYL-6,6-BIS(OXIDANYL)-4-PHENYL-5,7,8,9-TETRAHYDROBENZO[7]ANNULEN-7-YL]AZANIUM
2
CL
2
Ligand/Ion
CHLORIDE ION
3
DMS
2
Ligand/Ion
DIMETHYL SULFOXIDE
4
GOL
8
Ligand/Ion
GLYCEROL
5
MLI
5
Ligand/Ion
MALONATE ION
6
NA
6
Ligand/Ion
SODIUM ION
7
ZN
1
Ligand/Ion
ZINC ION
[
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Sites
(25, 25)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
25: AE7 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:297 , HIS A:301 , GLU A:320 , 7MF A:1002
binding site for residue ZN A 1001
02
AC2
SOFTWARE
GLU A:121 , MET A:260 , ALA A:262 , GLU A:264 , ARG A:293 , HIS A:297 , GLU A:298 , HIS A:301 , LYS A:319 , GLU A:320 , TYR A:376 , TYR A:381 , ARG A:825 , ZN A:1001 , MLI A:1021
binding site for residue 7MF A 1002
03
AC3
SOFTWARE
SER A:332 , ASP A:333 , GLY A:335 , HOH A:2067 , HOH A:2278 , HOH A:2357
binding site for residue NA A 1003
04
AC4
SOFTWARE
HIS A:771 , PHE A:774 , HOH A:1493 , HOH A:1551 , HOH A:2270 , HOH A:2325
binding site for residue NA A 1004
05
AC5
SOFTWARE
SER A:508 , HOH A:2008 , HOH A:2172 , HOH A:2223 , HOH A:2410 , HOH A:2933
binding site for residue NA A 1005
06
AC6
SOFTWARE
ASP A:452 , HOH A:1268 , HOH A:1379 , HOH A:2336 , HOH A:2344 , HOH A:2842
binding site for residue NA A 1006
07
AC7
SOFTWARE
GLU A:123 , GLU A:371 , HOH A:1153 , HOH A:1298 , HOH A:1682 , HOH A:1693 , HOH A:2373
binding site for residue NA A 1007
08
AC8
SOFTWARE
ASN A:399 , SER A:429 , HOH A:1595 , HOH A:1658 , HOH A:2035 , HOH A:2246
binding site for residue NA A 1008
09
AC9
SOFTWARE
LEU A:61 , VAL A:62 , TRP A:74 , ARG A:669 , GLU A:671 , HOH A:1126 , HOH A:1871 , HOH A:2079
binding site for residue GOL A 1009
10
AD1
SOFTWARE
ASN A:623 , GLY A:791 , HOH A:1113 , HOH A:1253 , HOH A:1625
binding site for residue GOL A 1010
11
AD2
SOFTWARE
PHE A:704 , HIS A:705 , ALA A:707 , TYR A:735 , LYS A:738 , TRP A:739 , HOH A:1161 , HOH A:1559 , HOH A:1832
binding site for residue GOL A 1011
12
AD3
SOFTWARE
TRP A:74 , LYS A:75 , HOH A:1196 , HOH A:1484 , HOH A:1871 , HOH A:2073
binding site for residue GOL A 1012
13
AD4
SOFTWARE
MET A:368 , PRO A:473 , ASP A:474 , ALA A:476 , HOH A:1110 , HOH A:1357 , HOH A:1629 , HOH A:1755 , HOH A:1758 , HOH A:2084 , HOH A:2105
binding site for residue GOL A 1013
14
AD5
SOFTWARE
ASP A:58 , LEU A:59 , GLU A:97 , ILE A:98 , SER A:99 , HOH A:1395 , HOH A:2110
binding site for residue GOL A 1014
15
AD6
SOFTWARE
HIS A:11 , ASP A:12 , ARG A:14 , ARG A:468 , THR A:469 , LYS A:478 , GLN A:479 , HOH A:1179 , HOH A:1191 , HOH A:1805 , HOH A:1875 , HOH A:2322 , HOH A:2822
binding site for residue GOL A 1015
16
AD7
SOFTWARE
LYS A:541 , GLU A:627 , PHE A:629 , ASP A:630 , ARG A:835 , HOH A:1261 , HOH A:1276 , HOH A:2128
binding site for residue GOL A 1016
17
AD8
SOFTWARE
THR A:393 , LEU A:394 , LEU A:395 , GLY A:396 , ASN A:507 , HOH A:1782
binding site for residue DMS A 1017
18
AD9
SOFTWARE
THR A:393 , GLU A:535 , HOH A:1157
binding site for residue DMS A 1018
19
AE1
SOFTWARE
ASP A:216 , ASN A:219 , ALA A:254 , SER A:273 , HOH A:1698
binding site for residue CL A 1019
20
AE2
SOFTWARE
ALA A:31 , GLN A:32 , HOH A:1490 , HOH A:2131
binding site for residue CL A 1020
21
AE3
SOFTWARE
TYR A:376 , THR A:377 , LEU A:378 , TYR A:381 , GLU A:382 , ARG A:825 , 7MF A:1002 , HOH A:1115 , HOH A:1224
binding site for residue MLI A 1021
22
AE4
SOFTWARE
GLY A:396 , GLU A:397 , GLU A:398 , HOH A:1119 , HOH A:1204 , HOH A:1246 , HOH A:1591 , HOH A:1763 , HOH A:1996 , HOH A:2136 , HOH A:2576
binding site for residue MLI A 1022
23
AE5
SOFTWARE
ALA A:531 , LEU A:532 , TRP A:546 , LEU A:551 , LEU A:554 , ASP A:566 , ALA A:567 , SER A:570 , HOH A:1105 , HOH A:1714
binding site for residue MLI A 1023
24
AE6
SOFTWARE
LYS A:8 , GLU A:123 , TRP A:313 , PHE A:314 , VAL A:369 , MET A:372 , HOH A:1153 , HOH A:1181 , HOH A:1271 , HOH A:1600
binding site for residue MLI A 1024
25
AE7
SOFTWARE
ASP A:28 , LEU A:29 , ASP A:30 , LYS A:33 , ARG A:171 , HOH A:1205 , HOH A:2131
binding site for residue MLI A 1025
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (578 KB)
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