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Asym. Unit
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Asym.Unit (167 KB)
Biol.Unit 1 (160 KB)
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(1)
Title
:
THE STUDY OF THE X-RAY INDUCED ENZYMATIC REDUCTION OF MOLECULAR OXYGEN TO WATER FOR LACCASE FROM STECCHERINUM MURASHKINSKYI. SECOND STRUCTURE OF THE SERIES WITH TOTAL EXPOSITION TIME 33 MIN.
Authors
:
K. M. Polyakov, T. N. Fedorova, S. Gavryushov, A. N. Popov, O. A. Glazuno
Date
:
16 Nov 16 (Deposition) - 10 May 17 (Release) - 24 May 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.35
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Molecular Oxygen Multi Copper Oxidase, Laccase, Oxidoreductase
(Keyword Search:
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Reference
:
K. M. Polyakov, S. Gavryushov, S. Ivanova, T. V. Fedorova, O. A. Glazunova, A. N. Popov, O. V. Koroleva
Structural Study Of The X-Ray-Induced Enzymatic Reduction O Molecular Oxygen To Water By Steccherinum Murashkinskyi Laccase: Insights Into The Reaction Mechanism.
Acta Crystallogr D Struct V. 73 388 2017 Biol
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Hetero Components
(6, 14)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
2a: CITRIC ACID (CITa)
3a: COPPER (II) ION (CUa)
3b: COPPER (II) ION (CUb)
3c: COPPER (II) ION (CUc)
3d: COPPER (II) ION (CUd)
5a: N-ACETYL-D-GLUCOSAMINE (NAGa)
5b: N-ACETYL-D-GLUCOSAMINE (NAGb)
5c: N-ACETYL-D-GLUCOSAMINE (NAGc)
5d: N-ACETYL-D-GLUCOSAMINE (NAGd)
4a: SODIUM ION (NAa)
6a: OXYGEN MOLECULE (OXYa)
6b: OXYGEN MOLECULE (OXYb)
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No.
Name
Count
Type
Full Name
1
BMA
2
Ligand/Ion
BETA-D-MANNOSE
2
CIT
1
Ligand/Ion
CITRIC ACID
3
CU
4
Ligand/Ion
COPPER (II) ION
4
NA
1
Ligand/Ion
SODIUM ION
5
NAG
4
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
6
OXY
2
Ligand/Ion
OXYGEN MOLECULE
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:112 , HIS A:402 , HIS A:452 , CU A:502 , OXY A:511 , HOH A:605
binding site for residue CU A 501
02
AC2
SOFTWARE
HIS A:65 , HIS A:67 , TRP A:108 , HIS A:110 , HIS A:454 , CU A:501 , CU A:503 , OXY A:511 , HOH A:605
binding site for residue CU A 502
03
AC3
SOFTWARE
HIS A:65 , HIS A:67 , HIS A:400 , HIS A:402 , CU A:502 , OXY A:511 , HOH A:605 , HOH A:929 , HOH A:1005
binding site for residue CU A 503
04
AC4
SOFTWARE
HIS A:397 , CYS A:453 , ILE A:455 , HIS A:458
binding site for residue CU A 504
05
AC5
SOFTWARE
HIS A:65 , HIS A:110 , HIS A:112 , HIS A:400 , HIS A:402 , HIS A:452 , HIS A:454 , CU A:501 , CU A:502 , CU A:503 , OXY A:512 , HOH A:605 , HOH A:607
binding site for residue OXY A 511
06
AC6
SOFTWARE
HIS A:110 , HIS A:112 , TYR A:117 , ASP A:456 , OXY A:511 , HOH A:602 , HOH A:607 , HOH A:832
binding site for residue OXY A 512
07
AC7
SOFTWARE
THR A:293 , THR A:294 , THR A:295 , GLY A:431 , GLY A:432 , HOH A:632 , HOH A:761 , HOH A:770 , HOH A:923 , HOH A:991
binding site for residue CIT A 513
08
AC8
SOFTWARE
VAL A:317 , HOH A:815 , HOH A:1074 , HOH A:1078 , HOH A:1116 , HOH A:1125
binding site for residue NA A 514
09
AC9
SOFTWARE
THR A:307 , ASN A:414 , PRO A:417 , ASN A:418 , HOH A:631 , HOH A:702 , HOH A:766 , HOH A:768 , HOH A:787 , HOH A:826 , HOH A:828 , HOH A:920 , HOH A:997 , HOH A:1048 , HOH A:1119
binding site for Poly-Saccharide residues NAG A 508 through BMA A 510 bound to ASN A 414
10
AD1
SOFTWARE
ARG A:323 , VAL A:331 , GLU A:385 , ASN A:436 , HOH A:618 , HOH A:687 , HOH A:712 , HOH A:824 , HOH A:848 , HOH A:1082
binding site for Poly-Saccharide residues NAG A 505 through BMA A 507 bound to ASN A 436
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (167 KB)
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