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5LYJ
Asym. Unit
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Asym.Unit (763 KB)
Biol.Unit 1 (750 KB)
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(1)
Title
:
TUBULIN-COMBRETASTATIN A4 COMPLEX
Authors
:
R. Gaspari, A. E. Prota, A. Cavalli, M. O. Steinmetz
Date
:
28 Sep 16 (Deposition) - 18 Jan 17 (Release) - 17 May 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B,C,D,E,F (1x)
Keywords
:
Cell Cycle, Tubulin Fold, Cytoskeleton, Cell Cycle- Inhibitor Complex
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
R. Gaspari, A. E. Prota, K. Bargsten, A. Cavalli, M. O. Steinmetz
Structural Basis Of Cis- And Trans-Combretastatin Binding T Tubulin
Chem 2017
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Hetero Components
(8, 18)
Info
All Hetero Components
1a: COMBRETASTATIN A4 (7BAa)
1b: COMBRETASTATIN A4 (7BAb)
2a: PHOSPHOMETHYLPHOSPHONIC ACID ADENY... (ACPa)
3a: CALCIUM ION (CAa)
3b: CALCIUM ION (CAb)
3c: CALCIUM ION (CAc)
3d: CALCIUM ION (CAd)
3e: CALCIUM ION (CAe)
4a: GUANOSINE-5'-DIPHOSPHATE (GDPa)
4b: GUANOSINE-5'-DIPHOSPHATE (GDPb)
5a: GLYCEROL (GOLa)
6a: GUANOSINE-5'-TRIPHOSPHATE (GTPa)
6b: GUANOSINE-5'-TRIPHOSPHATE (GTPb)
7a: 2-(N-MORPHOLINO)-ETHANESULFONIC AC... (MESa)
8a: MAGNESIUM ION (MGa)
8b: MAGNESIUM ION (MGb)
8c: MAGNESIUM ION (MGc)
8d: MAGNESIUM ION (MGd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
7BA
2
Ligand/Ion
COMBRETASTATIN A4
2
ACP
1
Ligand/Ion
PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER
3
CA
5
Ligand/Ion
CALCIUM ION
4
GDP
2
Ligand/Ion
GUANOSINE-5'-DIPHOSPHATE
5
GOL
1
Ligand/Ion
GLYCEROL
6
GTP
2
Ligand/Ion
GUANOSINE-5'-TRIPHOSPHATE
7
MES
1
Ligand/Ion
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
8
MG
4
Ligand/Ion
MAGNESIUM ION
[
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Sites
(18, 18)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:10 , GLN A:11 , ALA A:12 , GLN A:15 , ASP A:98 , ALA A:99 , ASN A:101 , SER A:140 , GLY A:143 , GLY A:144 , THR A:145 , GLY A:146 , VAL A:177 , GLU A:183 , ASN A:206 , TYR A:224 , ASN A:228 , ILE A:231 , MG A:502 , HOH A:607 , HOH A:611 , HOH A:618 , HOH A:620 , LYS B:254
binding site for residue GTP A 501
02
AC2
SOFTWARE
GTP A:501 , HOH A:607 , HOH A:611 , HOH A:618 , HOH A:620
binding site for residue MG A 502
03
AC3
SOFTWARE
ASP A:39 , THR A:41 , GLY A:44 , GLU A:55
binding site for residue CA A 503
04
AC4
SOFTWARE
ASN A:216 , PRO A:274 , VAL A:275 , ILE A:276 , ALA A:294 , ASN A:300
binding site for residue GOL A 504
05
AC5
SOFTWARE
GLY B:10 , GLN B:11 , CYS B:12 , GLN B:15 , SER B:140 , GLY B:143 , GLY B:144 , THR B:145 , GLY B:146 , PRO B:173 , VAL B:177 , ASP B:179 , GLU B:183 , ASN B:206 , TYR B:224 , ASN B:228 , MG B:502 , HOH B:602 , HOH B:603 , HOH B:608 , HOH B:609 , HOH B:611
binding site for residue GDP B 501
06
AC6
SOFTWARE
GLN B:11 , ASP B:179 , GDP B:501 , HOH B:601 , HOH B:603 , HOH B:627 , HOH C:650
binding site for residue MG B 502
07
AC7
SOFTWARE
THR A:179 , ALA A:180 , VAL A:181 , VAL B:238 , CYS B:241 , LEU B:242 , LEU B:248 , ALA B:250 , LEU B:255 , ASN B:258 , ALA B:316 , ILE B:318 , LYS B:352
binding site for residue 7BA B 503
08
AC8
SOFTWARE
TRP A:407 , ARG B:158 , PRO B:162 , ASP B:163 , ARG B:164 , MET B:166 , ASN B:197 , ASP B:199 , ARG B:253
binding site for residue MES B 504
09
AC9
SOFTWARE
HOH B:621 , HOH B:629 , HOH C:652 , HOH C:672
binding site for residue CA B 505
10
AD1
SOFTWARE
GLU B:113
binding site for residue CA B 506
11
AD2
SOFTWARE
GLY C:10 , GLN C:11 , ALA C:12 , GLN C:15 , ASP C:98 , ALA C:99 , ASN C:101 , SER C:140 , GLY C:143 , GLY C:144 , THR C:145 , GLY C:146 , ILE C:171 , VAL C:177 , THR C:179 , GLU C:183 , ASN C:206 , TYR C:224 , ASN C:228 , ILE C:231 , MG C:502 , HOH C:609 , HOH C:619 , HOH C:622 , HOH C:626 , HOH C:637 , LYS D:254
binding site for residue GTP C 501
12
AD3
SOFTWARE
GLU C:71 , GTP C:501 , HOH C:609 , HOH C:619 , HOH C:637
binding site for residue MG C 502
13
AD4
SOFTWARE
ASP C:39 , THR C:41 , GLY C:44 , GLU C:55 , HOH C:601
binding site for residue CA C 503
14
AD5
SOFTWARE
GLY D:10 , GLN D:11 , CYS D:12 , SER D:140 , GLY D:143 , GLY D:144 , THR D:145 , GLY D:146 , VAL D:177 , ASP D:179 , GLU D:183 , ASN D:206 , TYR D:224 , ASN D:228 , MG D:502 , HOH D:602
binding site for residue GDP D 501
15
AD6
SOFTWARE
GLN D:11 , GDP D:501 , HOH D:602
binding site for residue MG D 502
16
AD7
SOFTWARE
THR C:179 , ALA C:180 , VAL C:181 , VAL D:238 , CYS D:241 , LEU D:248 , ALA D:250 , LEU D:255 , ASN D:258 , ALA D:316 , ALA D:317 , ILE D:318 , LYS D:352 , ALA D:354
binding site for residue 7BA D 503
17
AD8
SOFTWARE
HOH A:630 , ASP E:44
binding site for residue CA E 201
18
AD9
SOFTWARE
LYS F:74 , LYS F:150 , GLN F:183 , LYS F:184 , TYR F:185 , LEU F:186 , LYS F:198 , ASP F:200 , ARG F:202 , ARG F:222 , THR F:241 , ASN F:242 , ASP F:318 , ILE F:330 , GLU F:331 , ASN F:333
binding site for residue ACP F 401
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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CATH Domains
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Asymmetric Unit 1
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Asym.Unit (763 KB)
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