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Asym. Unit
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Asym.Unit (112 KB)
Biol.Unit 1 (105 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE H253D MUTANT OF MCOG FROM ASPERGILLUS NIGER
Authors
:
M. Ferraroni, F. Briganti, J. A. Tamayo-Ramos, W. J. H. Van Berkel, A. H
Date
:
19 Sep 16 (Deposition) - 03 May 17 (Release) - 17 May 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.49
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Ferraroni, A. H. Westphal, M. Borsari, J. A. Tamayo-Ramos, F. Briganti, L. H. De Graaff, W. J. H. Van Berkel
Structure And Function Of Aspergillus Niger Laccase Mcog
Biocatalysis 2017
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Hetero Components
(5, 18)
Info
All Hetero Components
1a: BETA-D-MANNOSE (BMAa)
1b: BETA-D-MANNOSE (BMAb)
2a: COPPER (II) ION (CUa)
2b: COPPER (II) ION (CUb)
2c: COPPER (II) ION (CUc)
2d: COPPER (II) ION (CUd)
3a: ALPHA-D-MANNOSE (MANa)
3b: ALPHA-D-MANNOSE (MANb)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
4c: N-ACETYL-D-GLUCOSAMINE (NAGc)
4d: N-ACETYL-D-GLUCOSAMINE (NAGd)
4e: N-ACETYL-D-GLUCOSAMINE (NAGe)
4f: N-ACETYL-D-GLUCOSAMINE (NAGf)
4g: N-ACETYL-D-GLUCOSAMINE (NAGg)
4h: N-ACETYL-D-GLUCOSAMINE (NAGh)
4i: N-ACETYL-D-GLUCOSAMINE (NAGi)
5a: PEROXIDE ION (PERa)
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Label:
No.
Name
Count
Type
Full Name
1
BMA
2
Ligand/Ion
BETA-D-MANNOSE
2
CU
4
Ligand/Ion
COPPER (II) ION
3
MAN
2
Ligand/Ion
ALPHA-D-MANNOSE
4
NAG
9
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
5
PER
1
Ligand/Ion
PEROXIDE ION
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:110 , HIS A:152 , HIS A:517 , PER A:618
binding site for residue CU A 601
02
AC2
SOFTWARE
HIS A:154 , HIS A:451 , HIS A:453 , HIS A:515 , PER A:618
binding site for residue CU A 602
03
AC3
SOFTWARE
HIS A:108 , HIS A:451 , HIS A:453 , PER A:618 , HOH A:897
binding site for residue CU A 603
04
AC4
SOFTWARE
HIS A:448 , CYS A:516 , ILE A:518 , HIS A:521 , PHE A:526
binding site for residue CU A 604
05
AC5
SOFTWARE
ASN A:60 , MET A:100 , GLU A:101 , ASN A:102 , ASN A:103 , NAG A:607 , NAG A:609 , HOH A:926 , HOH A:946 , HOH A:978
binding site for residue NAG A 605
06
AC6
SOFTWARE
GLU A:196 , NAG A:610 , MAN A:613 , MAN A:617 , HOH A:779 , HOH A:832 , HOH A:852
binding site for residue BMA A 606
07
AC7
SOFTWARE
ASN A:102 , TYR A:562 , NAG A:605 , HOH A:848 , HOH A:851 , HOH A:881 , HOH A:1013 , HOH A:1150
binding site for residue NAG A 607
08
AC8
SOFTWARE
ASN A:400 , ARG A:567 , TYR A:573 , NAG A:615 , HOH A:769 , HOH A:808 , HOH A:845 , HOH A:1128
binding site for residue NAG A 608
09
AC9
SOFTWARE
GLN A:199 , ALA A:570 , BMA A:606 , HOH A:849 , HOH A:1079
binding site for residue MAN A 613
10
AD1
SOFTWARE
ASN A:134
binding site for residue NAG A 614
11
AD2
SOFTWARE
NAG A:608 , HOH A:743 , HOH A:1128
binding site for residue NAG A 615
12
AD3
SOFTWARE
NAG A:612
binding site for residue BMA A 616
13
AD4
SOFTWARE
BMA A:606 , HOH A:762
binding site for residue MAN A 617
14
AD5
SOFTWARE
HIS A:108 , HIS A:110 , HIS A:152 , HIS A:154 , HIS A:451 , HIS A:453 , HIS A:515 , HIS A:517 , CU A:601 , CU A:602 , CU A:603
binding site for residue PER A 618
15
AD6
SOFTWARE
PRO A:82 , THR A:83 , LEU A:168 , LEU A:181 , GLY A:182 , MET A:183 , ASN A:216 , BMA A:616 , HOH A:726 , HOH A:729 , HOH A:742 , HOH A:863 , HOH A:893 , HOH A:904 , HOH A:937 , HOH A:968 , HOH A:977
binding site for Poly-Saccharide residues NAG A 611 through NAG A 612 bound to ASN A 216
16
AD7
SOFTWARE
ASN A:102 , ASN A:103 , SER A:156 , THR A:193 , ASP A:195 , GLU A:196 , TRP A:403 , TYR A:562 , GLU A:574 , NAG A:605 , BMA A:606 , HOH A:718 , HOH A:741 , HOH A:878 , HOH A:907 , HOH A:973 , HOH A:976 , HOH A:982 , HOH A:1013 , HOH A:1035 , HOH A:1099 , HOH A:1102
binding site for Poly-Saccharide residues NAG A 609 through NAG A 610
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Chain A
Asymmetric Unit 1
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