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5LSC
Asym. Unit
Info
Asym.Unit (259 KB)
Biol.Unit 1 (124 KB)
Biol.Unit 2 (128 KB)
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(1)
Title
:
THE STRUCTURE OF THE METALLO-BETA-LACTAMASE VIM-2 IN COMPLEX WITH A TRIAZOLYLTHIOACETAMIDE INHIBITOR
Authors
:
T. Christopeit, K. -W. Yang, S. -K. Yang, H. -K. S. Leiros
Date
:
25 Aug 16 (Deposition) - 09 Nov 16 (Release) - 09 Nov 16 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Antibiotic Resistance, Carbapenemases, Verona Integron-Encoded Metallo-Beta-Lactamase 2, Vim-2, Hydrolase
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Gene Ontology, PubMed, Web (Google)
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Reference
:
T. Christopeit, K. -W. Yang, S. -K. Yang, H. -K. S. Leiros
The Structure Of The Metallo-Beta-Lactamase Vim-2 In Comple With A Triazolylthioacetamide Inhibitor.
Acta Crystallogr. , Sect. F V. 72 813 2016
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Hetero Components
(3, 14)
Info
All Hetero Components
1a: 2-[5-[2-(1,3-BENZOTHIAZOL-2-YLAMIN... (752a)
1b: 2-[5-[2-(1,3-BENZOTHIAZOL-2-YLAMIN... (752b)
2a: CHLORIDE ION (CLa)
2b: CHLORIDE ION (CLb)
2c: CHLORIDE ION (CLc)
2d: CHLORIDE ION (CLd)
2e: CHLORIDE ION (CLe)
2f: CHLORIDE ION (CLf)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
3e: ZINC ION (ZNe)
3f: ZINC ION (ZNf)
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No.
Name
Count
Type
Full Name
1
752
2
Ligand/Ion
2-[5-[2-(1,3-BENZOTHIAZOL-2-YLAMINO)-2-OXIDANYLIDENE-ETHYL]SULFANYL-4~{H}-1,2,4-TRIAZOL-3-YL]BENZOIC ACID
2
CL
6
Ligand/Ion
CHLORIDE ION
3
ZN
6
Ligand/Ion
ZINC ION
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Sites
(14, 14)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:170 , HIS A:285 , ASN A:288 , CL A:402 , ZN A:407
binding site for residue CL A 401
02
AC2
SOFTWARE
HIS A:170 , HIS A:285 , CL A:401 , ZN A:407 , HOH A:665
binding site for residue CL A 402
03
AC3
SOFTWARE
HIS A:118 , ASP A:119 , ASN A:165 , HOH A:786
binding site for residue CL A 403
04
AC4
SOFTWARE
GLN A:59 , TYR A:67 , TRP A:87 , GLY A:88 , HIS A:118 , ASP A:119 , ASP A:120 , HIS A:196 , CYS A:221 , ARG A:228 , GLY A:232 , ASN A:233 , HIS A:263 , ZN A:405 , ZN A:406 , HOH A:562 , HOH A:584 , HOH A:648 , HOH A:661 , HOH A:685 , HOH A:699
binding site for residue 752 A 404
05
AC5
SOFTWARE
HIS A:116 , HIS A:118 , ASP A:120 , HIS A:196 , 752 A:404
binding site for residue ZN A 405
06
AC6
SOFTWARE
ASP A:120 , CYS A:221 , HIS A:263 , 752 A:404
binding site for residue ZN A 406
07
AC7
SOFTWARE
HIS A:170 , HIS A:285 , CL A:401 , CL A:402
binding site for residue ZN A 407
08
AC8
SOFTWARE
ALA B:135 , HIS B:170 , HIS B:285 , ASN B:288 , CL B:402 , ZN B:407 , HOH B:750
binding site for residue CL B 401
09
AC9
SOFTWARE
HIS B:170 , HIS B:285 , ASN B:288 , CL B:401 , ZN B:407 , HOH B:527 , HOH B:644
binding site for residue CL B 402
10
AD1
SOFTWARE
HIS B:118 , ASP B:119 , ASN B:165
binding site for residue CL B 403
11
AD2
SOFTWARE
PHE B:61 , TYR B:67 , TRP B:87 , GLY B:88 , HIS B:118 , ASP B:119 , ASP B:120 , HIS B:196 , CYS B:221 , GLY B:232 , ASN B:233 , HIS B:263 , ZN B:405 , ZN B:406 , HOH B:580 , HOH B:596 , HOH B:656 , HOH B:658 , HOH B:686 , HOH B:760
binding site for residue 752 B 404
12
AD3
SOFTWARE
HIS B:116 , HIS B:118 , ASP B:120 , HIS B:196 , 752 B:404
binding site for residue ZN B 405
13
AD4
SOFTWARE
ASP B:120 , CYS B:221 , HIS B:263 , 752 B:404
binding site for residue ZN B 406
14
AD5
SOFTWARE
HIS B:170 , HIS B:285 , CL B:401 , CL B:402 , HOH B:527
binding site for residue ZN B 407
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SAPs(SNPs)/Variants
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Exons
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Asym.Unit (259 KB)
Header - Asym.Unit
Biol.Unit 1 (124 KB)
Header - Biol.Unit 1
Biol.Unit 2 (128 KB)
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