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5LGR
Asym. Unit
Info
Asym.Unit (716 KB)
Biol.Unit 1 (704 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MOUSE CARM1 IN COMPLEX WITH LIGAND P1C3U
Authors
:
N. Marechal, N. Troffer-Charlier, V. Cura, L. Bonnefond, J. Cavarelli
Date
:
08 Jul 16 (Deposition) - 22 Mar 17 (Release) - 12 Apr 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D,E,F,G,H (1x)
Keywords
:
Protein Arginine Methyltransferase, Catalytic Domain, Chromatin Regulator, Mrna Processing, Mrna Splicing, Nucleus, S-Adenosyl-L- Methionine, Transcription, Transcription Regulation, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. J. Van Haren, N. Marechal, N. Troffer-Charlier, A. Cianciulli, G. Sbardella, J. Cavarelli, N. I. Martin
Transition State Mimics Are Valuable Mechanistic Probes For Structural Studies With The Arginine Methyltransferase Carm1.
Proc. Natl. Acad. Sci. V. 114 3625 2017 U. S. A.
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Hetero Components
(8, 20)
Info
All Hetero Components
1a: ACETYL GROUP (ACEa)
1b: ACETYL GROUP (ACEb)
2a: 1,2-DIMETHOXYETHANE (DXEa)
3a: 1,2-ETHANEDIOL (EDOa)
3b: 1,2-ETHANEDIOL (EDOb)
3c: 1,2-ETHANEDIOL (EDOc)
3d: 1,2-ETHANEDIOL (EDOd)
3e: 1,2-ETHANEDIOL (EDOe)
3f: 1,2-ETHANEDIOL (EDOf)
4a: L-PROLINAMIDE (LPDa)
4b: L-PROLINAMIDE (LPDb)
4c: L-PROLINAMIDE (LPDc)
4d: L-PROLINAMIDE (LPDd)
5a: DI(HYDROXYETHYL)ETHER (PEGa)
6a: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-ME... (PG6a)
7a: (2~{R},3~{R},4~{S},5~{R})-2-(6-AMI... (QVRa)
7b: (2~{R},3~{R},4~{S},5~{R})-2-(6-AMI... (QVRb)
7c: (2~{R},3~{R},4~{S},5~{R})-2-(6-AMI... (QVRc)
7d: (2~{R},3~{R},4~{S},5~{R})-2-(6-AMI... (QVRd)
8a: SULFATE ION (SO4a)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACE
2
Mod. Amino Acid
ACETYL GROUP
2
DXE
1
Ligand/Ion
1,2-DIMETHOXYETHANE
3
EDO
6
Ligand/Ion
1,2-ETHANEDIOL
4
LPD
4
Ligand/Ion
L-PROLINAMIDE
5
PEG
1
Ligand/Ion
DI(HYDROXYETHYL)ETHER
6
PG6
1
Ligand/Ion
1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE
7
QVR
4
Ligand/Ion
(2~{R},3~{R},4~{S},5~{R})-2-(6-AMINOPURIN-9-YL)-5-[(~{E})-PROP-1-ENYL]OXOLANE-3,4-DIOL
8
SO4
1
Ligand/Ion
SULFATE ION
[
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Sites
(19, 19)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:444 , LYS A:445 , HOH A:661
binding site for residue SO4 A 501
02
AC2
SOFTWARE
PRO A:409 , THR A:410 , GLU A:411 , HOH A:610
binding site for residue EDO A 503
03
AC3
SOFTWARE
LEU A:178 , GLN A:205
binding site for residue DXE A 504
04
AC4
SOFTWARE
HOH B:601
binding site for residue EDO B 501
05
AC5
SOFTWARE
GLN A:456 , LYS A:463 , SER B:136 , GLU B:245 , HOH B:711
binding site for residue PG6 B 502
06
AC6
SOFTWARE
TRP C:404 , HOH C:607 , HOH C:645
binding site for residue EDO C 501
07
AC7
SOFTWARE
GLY B:461
binding site for residue PEG C 502
08
AC8
SOFTWARE
TRP D:404
binding site for residue EDO D 501
09
AC9
SOFTWARE
ALA E:4
binding site for residue EDO E 103
10
AD1
SOFTWARE
TYR A:150 , PHE A:151 , PHE A:153 , TYR A:154 , MET A:163 , GLY A:193 , GLU A:215 , ALA A:216 , GLY A:241 , LYS A:242 , VAL A:243 , GLU A:244 , GLU A:258 , MET A:260 , GLU A:267 , MET A:269 , SER A:272 , HIS A:415 , HOH A:683 , ALA E:-1 , ILE E:0 , PRO E:2 , ALA E:3 , HOH E:204 , HOH E:206
binding site for Di-peptide QVR E 101 and ARG E 1
11
AD2
SOFTWARE
ASN A:162 , LEU A:413 , THR A:414 , HIS A:415 , TYR A:417 , PRO E:2 , ALA E:3 , EDO E:103 , HOH E:203 , HOH E:205
binding site for Di-peptide LPD E 102 and ALA E 4
12
AD3
SOFTWARE
PHE A:475 , ALA E:3 , ASN F:-5 , MET F:-4 , GLN F:-6 , HOH F:201 , HOH F:208
binding site for Di-peptide ACE F 101 and PHE F -7
13
AD4
SOFTWARE
TYR B:150 , PHE B:151 , PHE B:153 , TYR B:154 , GLN B:159 , MET B:163 , GLY B:193 , GLU B:215 , ALA B:216 , LYS B:242 , VAL B:243 , GLU B:244 , GLU B:258 , MET B:260 , GLU B:267 , MET B:269 , SER B:272 , HIS B:415 , HOH B:681 , ILE F:0 , PRO F:2 , HOH F:205 , HOH F:207
binding site for Di-peptide QVR F 102 and ARG F 1
14
AD5
SOFTWARE
ASN B:162 , LEU B:413 , HIS B:415 , TYR B:417 , PRO F:2 , ALA F:3
binding site for Di-peptide LPD F 103 and ALA F 4
15
AD6
SOFTWARE
ASN C:162 , LEU C:413 , THR C:414 , HIS C:415 , TYR C:417 , PRO G:2 , ALA G:3
binding site for Di-peptide LPD G 101 and ALA G 4
16
AD7
SOFTWARE
TYR C:150 , PHE C:151 , PHE C:153 , TYR C:154 , MET C:163 , GLY C:193 , GLU C:215 , ALA C:216 , GLY C:241 , LYS C:242 , VAL C:243 , GLU C:244 , GLU C:258 , MET C:260 , GLU C:267 , MET C:269 , SER C:272 , HIS C:415 , HOH C:648 , ALA G:-1 , ILE G:0 , PRO G:2 , ALA G:3 , HOH G:201 , HOH G:202
binding site for Di-peptide QVR G 102 and ARG G 1
17
AD8
SOFTWARE
TYR C:477 , ALA G:-1 , GLN H:-6 , MET H:-4 , ASN H:-5 , HOH H:205
binding site for Di-peptide ACE H 101 and PHE H -7
18
AD9
SOFTWARE
TYR D:150 , PHE D:151 , PHE D:153 , TYR D:154 , MET D:163 , GLY D:193 , GLU D:215 , ALA D:216 , GLY D:241 , LYS D:242 , VAL D:243 , GLU D:244 , GLU D:258 , MET D:260 , GLU D:267 , MET D:269 , SER D:272 , HIS D:415 , HOH D:625 , HOH D:670 , ALA H:-1 , ILE H:0 , PRO H:2 , ALA H:3 , HOH H:203
binding site for Di-peptide QVR H 102 and ARG H 1
19
AE1
SOFTWARE
ASN D:162 , HIS D:415 , TYR D:417 , PRO H:2 , ALA H:3 , HOH H:202 , HOH H:204
binding site for Di-peptide LPD H 103 and ALA H 4
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (716 KB)
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