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5LGQ
Asym. Unit
Info
Asym.Unit (721 KB)
Biol.Unit 1 (708 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MOUSE CARM1 IN COMPLEX WITH LIGAND P2C3S
Authors
:
N. Marechal, N. Troffer-Charlier, V. Cura, L. Bonnefond, J. Cavarelli
Date
:
08 Jul 16 (Deposition) - 22 Mar 17 (Release) - 12 Apr 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.11
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: A,B,C,D,E,F,G,H (1x)
Keywords
:
Protein Arginine Methyltransferase, Catalytic Domain, Chromatin Regulator, Mrna Processing, Mrna Splicing, Nucleus, S-Adenosyl-L- Methionine, Transcription, Transcription Regulation, Transferase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. J. Van Haren, N. Marechal, N. Troffer-Charlier, A. Cianciulli, G. Sbardella, J. Cavarelli, N. I. Martin
Transition State Mimics Are Valuable Mechanistic Probes For Structural Studies With The Arginine Methyltransferase Carm1.
Proc. Natl. Acad. Sci. V. 114 3625 2017 U. S. A.
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Hetero Components
(6, 18)
Info
All Hetero Components
1a: (2~{R},3~{R},4~{S},5~{R})-2-(6-AMI... (8ZBa)
1b: (2~{R},3~{R},4~{S},5~{R})-2-(6-AMI... (8ZBb)
1c: (2~{R},3~{R},4~{S},5~{R})-2-(6-AMI... (8ZBc)
1d: (2~{R},3~{R},4~{S},5~{R})-2-(6-AMI... (8ZBd)
2a: 1,2-DIMETHOXYETHANE (DXEa)
3a: 1,2-ETHANEDIOL (EDOa)
3b: 1,2-ETHANEDIOL (EDOb)
3c: 1,2-ETHANEDIOL (EDOc)
3d: 1,2-ETHANEDIOL (EDOd)
3e: 1,2-ETHANEDIOL (EDOe)
3f: 1,2-ETHANEDIOL (EDOf)
3g: 1,2-ETHANEDIOL (EDOg)
4a: DI(HYDROXYETHYL)ETHER (PEGa)
4b: DI(HYDROXYETHYL)ETHER (PEGb)
4c: DI(HYDROXYETHYL)ETHER (PEGc)
4d: DI(HYDROXYETHYL)ETHER (PEGd)
5a: 1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-ME... (PG6a)
6a: SULFATE ION (SO4a)
View:
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Label:
No.
Name
Count
Type
Full Name
1
8ZB
4
Ligand/Ion
(2~{R},3~{R},4~{S},5~{R})-2-(6-AMINOPURIN-9-YL)-5-PROPYL-OXOLANE-3,4-DIOL
2
DXE
1
Ligand/Ion
1,2-DIMETHOXYETHANE
3
EDO
7
Ligand/Ion
1,2-ETHANEDIOL
4
PEG
4
Ligand/Ion
DI(HYDROXYETHYL)ETHER
5
PG6
1
Ligand/Ion
1-(2-METHOXY-ETHOXY)-2-{2-[2-(2-METHOXY-ETHOXY]-ETHOXY}-ETHANE
6
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(18, 18)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:398
binding site for residue EDO A 501
02
AC2
SOFTWARE
TRP A:404 , HOH A:638
binding site for residue PEG A 502
03
AC3
SOFTWARE
GLN A:174 , LEU A:178 , GLN A:205 , HOH A:689 , HOH A:804 , ASP D:458 , THR D:460
binding site for residue PEG A 503
04
AC4
SOFTWARE
TYR A:315 , SER A:325 , ARG A:328 , GLY A:329
binding site for residue DXE A 504
05
AC5
SOFTWARE
GLN A:456 , LYS A:463 , SER A:465 , GLU B:244 , GLU B:245 , VAL B:246 , SER B:247
binding site for residue PG6 A 505
06
AC6
SOFTWARE
ASN A:444 , LYS A:445 , HOH A:612 , ARG B:209
binding site for residue SO4 A 506
07
AC7
SOFTWARE
HOH B:601
binding site for residue EDO B 501
08
AC8
SOFTWARE
TYR B:356 , ALA B:363 , HOH B:608
binding site for residue EDO B 502
09
AC9
SOFTWARE
PRO B:409 , GLU B:411
binding site for residue EDO B 503
10
AD1
SOFTWARE
ASP C:393 , TRP C:404 , HOH C:679
binding site for residue EDO C 501
11
AD2
SOFTWARE
VAL C:332 , ASP C:333 , GLN C:424 , HOH C:633
binding site for residue EDO C 502
12
AD3
SOFTWARE
TYR C:315 , ARG C:328 , VAL C:332 , HOH C:619
binding site for residue PEG C 503
13
AD4
SOFTWARE
TRP D:404
binding site for residue EDO D 501
14
AD5
SOFTWARE
SER B:325 , ARG B:328 , ARG D:328
binding site for residue PEG D 502
15
AD6
SOFTWARE
TYR A:150 , PHE A:151 , TYR A:154 , MET A:163 , GLY A:193 , GLU A:215 , ALA A:216 , GLY A:241 , LYS A:242 , VAL A:243 , GLU A:244 , GLU A:258 , MET A:260 , GLU A:267 , MET A:269 , SER A:272 , HIS A:415 , HOH A:628 , HOH A:644 , ALA E:-1 , PRO E:0 , PRO E:2 , PRO E:3 , HOH E:203 , HOH E:205
binding site for Di-peptide QVR E 101 and ARG E 1
16
AD7
SOFTWARE
PHE B:138 , TYR B:150 , PHE B:151 , TYR B:154 , MET B:163 , GLY B:193 , GLU B:215 , ALA B:216 , GLY B:241 , LYS B:242 , VAL B:243 , GLU B:244 , GLU B:258 , GLU B:267 , MET B:269 , SER B:272 , HIS B:415 , HOH B:651 , HOH B:673 , ALA F:-1 , PRO F:0 , PRO F:2 , PRO F:3 , HOH F:201 , HOH F:204
binding site for Di-peptide QVR F 101 and ARG F 1
17
AD8
SOFTWARE
TYR C:150 , PHE C:151 , TYR C:154 , MET C:163 , GLY C:193 , GLU C:215 , ALA C:216 , GLY C:241 , LYS C:242 , VAL C:243 , GLU C:244 , GLU C:258 , MET C:260 , GLU C:267 , MET C:269 , SER C:272 , HIS C:415 , TRP C:416 , HOH C:632 , ALA G:-1 , PRO G:0 , PRO G:2 , PRO G:3 , HOH G:201 , HOH G:203
binding site for Di-peptide QVR G 101 and ARG G 1
18
AD9
SOFTWARE
PHE D:138 , TYR D:150 , PHE D:151 , TYR D:154 , MET D:163 , GLY D:193 , GLU D:215 , ALA D:216 , GLY D:241 , LYS D:242 , VAL D:243 , GLU D:244 , GLU D:258 , MET D:260 , GLU D:267 , MET D:269 , SER D:272 , HIS D:415 , ALA H:-1 , PRO H:0 , PRO H:2 , PRO H:3 , HOH H:203 , HOH H:204 , HOH H:205
binding site for Di-peptide QVR H 101 and ARG H 1
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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SCOP Domains
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CATH Domains
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Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (721 KB)
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