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5LG6
Asym. Unit
Info
Asym.Unit (316 KB)
Biol.Unit 1 (156 KB)
Biol.Unit 2 (154 KB)
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(1)
Title
:
STRUCTURE OF THE DEGLYCOSYLATED PORCINE AMINOPEPTIDASE N ECTODOMAIN
Authors
:
C. Santiago, J. Reguera, G. Mudgal, J. M. Casasnovas
Date
:
06 Jul 16 (Deposition) - 12 Apr 17 (Release) - 19 Apr 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.50
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Cd13, Papn, Porcine Aminopeptidase N, Coronavirus, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
C. Santiago, G. Mudgal, J. Reguera, R. Recacha, S. Albrecht, L. Enjuanes, J. M. Casasnovas
Allosteric Inhibition Of Aminopeptidase N Functions Related To Tumor Growth And Virus Infection.
Sci Rep V. 7 46045 2017
[
close entry info
]
Hetero Components
(3, 68)
Info
All Hetero Components
1a: SELENOMETHIONINE (MSEa)
1aa: SELENOMETHIONINE (MSEaa)
1ab: SELENOMETHIONINE (MSEab)
1ac: SELENOMETHIONINE (MSEac)
1ad: SELENOMETHIONINE (MSEad)
1ae: SELENOMETHIONINE (MSEae)
1af: SELENOMETHIONINE (MSEaf)
1ag: SELENOMETHIONINE (MSEag)
1ah: SELENOMETHIONINE (MSEah)
1ai: SELENOMETHIONINE (MSEai)
1aj: SELENOMETHIONINE (MSEaj)
1ak: SELENOMETHIONINE (MSEak)
1al: SELENOMETHIONINE (MSEal)
1am: SELENOMETHIONINE (MSEam)
1an: SELENOMETHIONINE (MSEan)
1ao: SELENOMETHIONINE (MSEao)
1ap: SELENOMETHIONINE (MSEap)
1aq: SELENOMETHIONINE (MSEaq)
1ar: SELENOMETHIONINE (MSEar)
1as: SELENOMETHIONINE (MSEas)
1at: SELENOMETHIONINE (MSEat)
1au: SELENOMETHIONINE (MSEau)
1av: SELENOMETHIONINE (MSEav)
1b: SELENOMETHIONINE (MSEb)
1c: SELENOMETHIONINE (MSEc)
1d: SELENOMETHIONINE (MSEd)
1e: SELENOMETHIONINE (MSEe)
1f: SELENOMETHIONINE (MSEf)
1g: SELENOMETHIONINE (MSEg)
1h: SELENOMETHIONINE (MSEh)
1i: SELENOMETHIONINE (MSEi)
1j: SELENOMETHIONINE (MSEj)
1k: SELENOMETHIONINE (MSEk)
1l: SELENOMETHIONINE (MSEl)
1m: SELENOMETHIONINE (MSEm)
1n: SELENOMETHIONINE (MSEn)
1o: SELENOMETHIONINE (MSEo)
1p: SELENOMETHIONINE (MSEp)
1q: SELENOMETHIONINE (MSEq)
1r: SELENOMETHIONINE (MSEr)
1s: SELENOMETHIONINE (MSEs)
1t: SELENOMETHIONINE (MSEt)
1u: SELENOMETHIONINE (MSEu)
1v: SELENOMETHIONINE (MSEv)
1w: SELENOMETHIONINE (MSEw)
1x: SELENOMETHIONINE (MSEx)
1y: SELENOMETHIONINE (MSEy)
1z: SELENOMETHIONINE (MSEz)
2a: N-ACETYL-D-GLUCOSAMINE (NAGa)
2b: N-ACETYL-D-GLUCOSAMINE (NAGb)
2c: N-ACETYL-D-GLUCOSAMINE (NAGc)
2d: N-ACETYL-D-GLUCOSAMINE (NAGd)
2e: N-ACETYL-D-GLUCOSAMINE (NAGe)
2f: N-ACETYL-D-GLUCOSAMINE (NAGf)
2g: N-ACETYL-D-GLUCOSAMINE (NAGg)
2h: N-ACETYL-D-GLUCOSAMINE (NAGh)
2i: N-ACETYL-D-GLUCOSAMINE (NAGi)
2j: N-ACETYL-D-GLUCOSAMINE (NAGj)
2k: N-ACETYL-D-GLUCOSAMINE (NAGk)
2l: N-ACETYL-D-GLUCOSAMINE (NAGl)
2m: N-ACETYL-D-GLUCOSAMINE (NAGm)
2n: N-ACETYL-D-GLUCOSAMINE (NAGn)
2o: N-ACETYL-D-GLUCOSAMINE (NAGo)
2p: N-ACETYL-D-GLUCOSAMINE (NAGp)
2q: N-ACETYL-D-GLUCOSAMINE (NAGq)
2r: N-ACETYL-D-GLUCOSAMINE (NAGr)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
MSE
48
Mod. Amino Acid
SELENOMETHIONINE
2
NAG
18
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
3
ZN
2
Ligand/Ion
ZINC ION
[
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Sites
(20, 20)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:383 , HIS A:387 , GLU A:406 , HOH A:1299
binding site for residue ZN A 1010
02
AC2
SOFTWARE
HIS B:383 , HIS B:387 , GLU B:406
binding site for residue ZN B 1010
03
AC3
SOFTWARE
ASN A:82 , GLU A:172 , NAG A:1002
binding site for Mono-Saccharide NAG A 1009 bound to ASN A 82
04
AC4
SOFTWARE
ASN A:124 , GLN A:178 , HOH A:1222
binding site for Mono-Saccharide NAG A 1001 bound to ASN A 124
05
AC5
SOFTWARE
SER A:80 , ASN A:82 , ARG A:106 , ASN A:229 , THR A:266 , NAG A:1009
binding site for Mono-Saccharide NAG A 1002 bound to ASN A 229
06
AC6
SOFTWARE
LYS A:200 , ASN A:237 , GLU A:281 , HOH A:1186
binding site for Mono-Saccharide NAG A 1003 bound to ASN A 237
07
AC7
SOFTWARE
TYR A:311 , ASN A:314
binding site for Mono-Saccharide NAG A 1004 bound to ASN A 314
08
AC8
SOFTWARE
ASN A:328 , HIS A:500 , HOH A:1209 , NAG B:1008
binding site for Mono-Saccharide NAG A 1005 bound to ASN A 328
09
AC9
SOFTWARE
ALA A:223 , ASN A:506
binding site for Mono-Saccharide NAG A 1006 bound to ASN A 506
10
AD1
SOFTWARE
ASP A:428 , ASN A:622 , HOH A:1174 , HOH A:1216
binding site for Mono-Saccharide NAG A 1007 bound to ASN A 622
11
AD2
SOFTWARE
ASN A:646 , SER A:648 , VAL A:649
binding site for Mono-Saccharide NAG A 1008 bound to ASN A 646
12
AD3
SOFTWARE
ASN B:82 , ILE B:104 , GLU B:172 , NAG B:1002
binding site for Mono-Saccharide NAG B 1009 bound to ASN B 82
13
AD4
SOFTWARE
ASN B:124 , GLN B:178 , GLY B:179 , HOH B:1114
binding site for Mono-Saccharide NAG B 1001 bound to ASN B 124
14
AD5
SOFTWARE
SER B:80 , ASN B:82 , ARG B:106 , ASN B:229 , THR B:266 , NAG B:1009
binding site for Mono-Saccharide NAG B 1002 bound to ASN B 229
15
AD6
SOFTWARE
LYS B:200 , ASN B:237 , GLU B:281
binding site for Mono-Saccharide NAG B 1003 bound to ASN B 237
16
AD7
SOFTWARE
TYR B:311 , ASN B:314 , LYS B:374
binding site for Mono-Saccharide NAG B 1004 bound to ASN B 314
17
AD8
SOFTWARE
ASP A:614 , ASN B:328 , HIS B:500
binding site for Mono-Saccharide NAG B 1005 bound to ASN B 328
18
AD9
SOFTWARE
ALA B:223 , PHE B:502 , GLN B:505 , ASN B:506 , HOH B:1199 , HOH B:1205
binding site for Mono-Saccharide NAG B 1006 bound to ASN B 506
19
AE1
SOFTWARE
ASP B:428 , ASN B:622 , HOH B:1130 , HOH B:1179
binding site for Mono-Saccharide NAG B 1007 bound to ASN B 622
20
AE2
SOFTWARE
NAG A:1005 , ASN B:646 , SER B:648 , VAL B:649
binding site for Mono-Saccharide NAG B 1008 bound to ASN B 646
[
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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CATH Domains
(0, 0)
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all CATH domains
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Sorry, no Info available
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Pfam Domains
(0, 0)
Info
all PFAM domains
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Sorry, no Info available
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Asymmetric Unit 1
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Asym.Unit (316 KB)
Header - Asym.Unit
Biol.Unit 1 (156 KB)
Header - Biol.Unit 1
Biol.Unit 2 (154 KB)
Header - Biol.Unit 2
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