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5L42
Asym. Unit
Info
Asym.Unit (191 KB)
Biol.Unit 1 (182 KB)
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(1)
Title
:
LEISHMANIA MAJOR PTERIDINE REDUCTASE 1 (PTR1) IN COMPLEX WITH COMPOUND 3
Authors
:
L. Dello Iacono, F. Di Pisa, C. Pozzi, G. Landi, S. Mangani
Date
:
24 May 16 (Deposition) - 03 May 17 (Release) - 03 May 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D (1x)
Keywords
:
Leishmania Major, Pteridine Reductase 1, Ptr1, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Dello Iacono, F. Di Pisa, C. Pozzi, G. Landi, S. Mangani
Leishmania Major Pteridine Reductase 1 (Ptr1) In Complex With Compound 3
To Be Published
[
close entry info
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Hetero Components
(7, 28)
Info
All Hetero Components
1a: (2~{R})-2-[3,4-BIS(OXIDANYL)PHENYL... (6J6a)
1b: (2~{R})-2-[3,4-BIS(OXIDANYL)PHENYL... (6J6b)
1c: (2~{R})-2-[3,4-BIS(OXIDANYL)PHENYL... (6J6c)
1d: (2~{R})-2-[3,4-BIS(OXIDANYL)PHENYL... (6J6d)
2a: ACETATE ION (ACTa)
2b: ACETATE ION (ACTb)
2c: ACETATE ION (ACTc)
2d: ACETATE ION (ACTd)
3a: S-OXY CYSTEINE (CSXa)
3b: S-OXY CYSTEINE (CSXb)
3c: S-OXY CYSTEINE (CSXc)
3d: S-OXY CYSTEINE (CSXd)
4a: 1,2-ETHANEDIOL (EDOa)
4b: 1,2-ETHANEDIOL (EDOb)
4c: 1,2-ETHANEDIOL (EDOc)
4d: 1,2-ETHANEDIOL (EDOd)
4e: 1,2-ETHANEDIOL (EDOe)
5a: GLYCEROL (GOLa)
5b: GLYCEROL (GOLb)
5c: GLYCEROL (GOLc)
5d: GLYCEROL (GOLd)
5e: GLYCEROL (GOLe)
5f: GLYCEROL (GOLf)
6a: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPa)
6b: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPb)
6c: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPc)
6d: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPd)
7a: TRIETHYLENE GLYCOL (PGEa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
6J6
4
Ligand/Ion
(2~{R})-2-[3,4-BIS(OXIDANYL)PHENYL]-6-OXIDANYL-2,3-DIHYDROCHROMEN-4-ONE
2
ACT
4
Ligand/Ion
ACETATE ION
3
CSX
4
Mod. Amino Acid
S-OXY CYSTEINE
4
EDO
5
Ligand/Ion
1,2-ETHANEDIOL
5
GOL
6
Ligand/Ion
GLYCEROL
6
NDP
4
Ligand/Ion
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
7
PGE
1
Ligand/Ion
TRIETHYLENE GLYCOL
[
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Sites
(24, 24)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: AD1 (SOFTWARE)
11: AD2 (SOFTWARE)
12: AD3 (SOFTWARE)
13: AD4 (SOFTWARE)
14: AD5 (SOFTWARE)
15: AD6 (SOFTWARE)
16: AD7 (SOFTWARE)
17: AD8 (SOFTWARE)
18: AD9 (SOFTWARE)
19: AE1 (SOFTWARE)
20: AE2 (SOFTWARE)
21: AE3 (SOFTWARE)
22: AE4 (SOFTWARE)
23: AE5 (SOFTWARE)
24: AE6 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:17 , SER A:111 , PHE A:113 , LEU A:188 , TYR A:194 , GLY A:225 , LEU A:226 , TYR A:283 , NDP A:302 , ACT A:307 , HOH A:466 , HOH A:486 , ARG D:287 , HOH D:456
binding site for residue 6J6 A 301
02
AC2
SOFTWARE
ARG A:17 , LEU A:18 , HIS A:36 , TYR A:37 , HIS A:38 , ARG A:39 , SER A:40 , ALA A:64 , ASP A:65 , LEU A:66 , SER A:67 , ASN A:109 , ALA A:110 , SER A:111 , SER A:112 , ASP A:142 , MET A:179 , VAL A:180 , ASP A:181 , TYR A:194 , LYS A:198 , PRO A:224 , GLY A:225 , LEU A:226 , SER A:227 , 6J6 A:301 , ACT A:307 , HOH A:402 , HOH A:409 , HOH A:421 , HOH A:427 , HOH A:431 , HOH A:436 , HOH A:451 , HOH A:507
binding site for residue NDP A 302
03
AC3
SOFTWARE
TYR A:97 , ARG A:161 , THR A:165
binding site for residue GOL A 303
04
AC4
SOFTWARE
GLN A:216 , LYS A:270 , ARG C:250 , ARG D:54
binding site for residue GOL A 304
05
AC5
SOFTWARE
HIS A:99 , TRP A:100 , GLY A:101
binding site for residue ACT A 305
06
AC6
SOFTWARE
ARG A:20 , THR A:50 , HOH A:475 , ARG B:20 , THR B:50
binding site for residue ACT A 306
07
AC7
SOFTWARE
ARG A:17 , 6J6 A:301 , NDP A:302 , HOH A:497
binding site for residue ACT A 307
08
AC8
SOFTWARE
TYR A:248 , ARG A:250 , HOH A:415 , HOH A:416 , GLN C:216 , LYS C:270
binding site for residue PGE A 308
09
AC9
SOFTWARE
PRO A:166 , LYS A:168
binding site for residue EDO A 309
10
AD1
SOFTWARE
VAL A:6 , ASN A:57 , SER A:58 , HOH A:438
binding site for residue EDO A 310
11
AD2
SOFTWARE
ARG B:17 , SER B:111 , PHE B:113 , TYR B:194 , GLY B:225 , LEU B:226 , TYR B:283 , NDP B:302 , HOH B:491 , HOH B:493 , HOH B:539 , ARG C:287 , HOH C:572
binding site for residue 6J6 B 301
12
AD3
SOFTWARE
ARG B:17 , LEU B:18 , HIS B:36 , TYR B:37 , HIS B:38 , ARG B:39 , SER B:40 , ALA B:64 , ASP B:65 , LEU B:66 , ASN B:109 , ALA B:110 , SER B:111 , SER B:112 , ASP B:142 , MET B:179 , VAL B:180 , ASP B:181 , TYR B:194 , LYS B:198 , PRO B:224 , GLY B:225 , LEU B:226 , SER B:227 , 6J6 B:301 , GOL B:305 , HOH B:408 , HOH B:421 , HOH B:443 , HOH B:445 , HOH B:449 , HOH B:459 , HOH B:473 , HOH B:517
binding site for residue NDP B 302
13
AD4
SOFTWARE
GLN B:216 , LYS B:270 , HOH B:450 , TYR D:248 , ARG D:250
binding site for residue GOL B 303
14
AD5
SOFTWARE
VAL B:228 , ARG B:242 , ARG B:250 , ASP B:251 , SER B:252 , HOH B:544
binding site for residue GOL B 304
15
AD6
SOFTWARE
VAL A:230 , ASP A:231 , ASP A:232 , NDP B:302 , HOH B:421 , HOH B:427 , HOH B:443 , HOH B:449 , HOH B:507
binding site for residue GOL B 305
16
AD7
SOFTWARE
TYR B:248 , ARG B:250 , HOH B:489 , GLN D:216 , LYS D:270
binding site for residue ACT B 306
17
AD8
SOFTWARE
ARG B:287 , ARG C:17 , SER C:111 , PHE C:113 , LEU C:188 , TYR C:194 , LEU C:226 , LEU C:229 , NDP C:302 , GOL C:303 , HOH C:423 , HOH C:523
binding site for residue 6J6 C 301
18
AD9
SOFTWARE
ARG C:17 , LEU C:18 , HIS C:36 , TYR C:37 , HIS C:38 , ARG C:39 , SER C:40 , ALA C:64 , ASP C:65 , LEU C:66 , SER C:67 , ASN C:109 , ALA C:110 , SER C:111 , SER C:112 , ASP C:142 , SER C:146 , MET C:179 , VAL C:180 , ASP C:181 , TYR C:194 , LYS C:198 , PRO C:224 , GLY C:225 , LEU C:226 , SER C:227 , 6J6 C:301 , GOL C:303 , HOH C:416 , HOH C:421 , HOH C:458 , HOH C:465 , HOH C:472 , HOH C:490 , HOH C:506 , HOH C:536
binding site for residue NDP C 302
19
AE1
SOFTWARE
ARG C:17 , PHE C:113 , VAL C:230 , 6J6 C:301 , NDP C:302
binding site for residue GOL C 303
20
AE2
SOFTWARE
HOH C:414 , HOH C:509
binding site for residue EDO C 304
21
AE3
SOFTWARE
ARG A:287 , ARG D:17 , SER D:111 , PHE D:113 , TYR D:194 , LEU D:226 , LEU D:229 , HIS D:241 , NDP D:302 , EDO D:304 , HOH D:444 , HOH D:534
binding site for residue 6J6 D 301
22
AE4
SOFTWARE
ARG D:17 , LEU D:18 , TYR D:37 , HIS D:38 , ARG D:39 , SER D:40 , ALA D:64 , ASP D:65 , LEU D:66 , SER D:67 , ASN D:109 , ALA D:110 , SER D:111 , SER D:112 , ASP D:142 , MET D:179 , VAL D:180 , ASP D:181 , TYR D:194 , LYS D:198 , PRO D:224 , GLY D:225 , LEU D:226 , SER D:227 , 6J6 D:301 , EDO D:304 , HOH D:412 , HOH D:418 , HOH D:423 , HOH D:434 , HOH D:455 , HOH D:468 , HOH D:470 , HOH D:485
binding site for residue NDP D 302
23
AE5
SOFTWARE
HIS D:169 , HOH D:471 , HOH D:562
binding site for residue EDO D 303
24
AE6
SOFTWARE
6J6 D:301 , NDP D:302 , HOH D:527
binding site for residue EDO D 304
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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